FFCP PHASE1:Hg19::chr7:115608357..115608372,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22797 | |EntrezGene=22797 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11754 | |HGNC=11754 | ||
|TSSclassifier=strong | |||
|UniProt=O14948 | |UniProt=O14948 | ||
|association_with_transcript=0bp_to_ENST00000497829,NM_001244583,uc003vhm.1_5end | |association_with_transcript=0bp_to_ENST00000497829,NM_001244583,uc003vhm.1_5end | ||
|cluster_id=chr7:115608357..115608372,- | |||
|coexpression_cluster_id=C235 | |coexpression_cluster_id=C235 | ||
|description=CAGE_peak_3_at_TFEC_5end | |description=CAGE_peak_3_at_TFEC_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002563!2.68e-11!4;CL:0002616!3.63e-11!1 | |ontology_enrichment_celltype=CL:0002563!2.68e-11!4;CL:0002616!3.63e-11!1 | ||
|ontology_enrichment_celltype_v019=CL:0002563;1.79e-15;4!CL:0002253;1.61e-08;2 | |ontology_enrichment_celltype_v019=CL:0002563;1.79e-15;4!CL:0002253;1.61e-08;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,1.79e-15,4;CL:0002253,1.61e-08,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.15e-08;2 | |ontology_enrichment_development_v019=UBERON:0007297;2.15e-08;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3493;2.77e-08;2 | |ontology_enrichment_disease_v019=DOID:3493;2.77e-08;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3493,2.67e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0000160!5.00e-22!27;UBERON:0005409!6.20e-17!35;UBERON:0000059!1.23e-14!11;UBERON:0001301!1.78e-11!1;UBERON:0001242!2.68e-11!4;UBERON:0001262!2.68e-11!4;UBERON:0004786!2.68e-11!4;UBERON:0004808!2.68e-11!4;UBERON:0001277!2.68e-11!4;UBERON:0001052!6.33e-11!4;UBERON:0001155!1.48e-10!9;UBERON:0003350!3.25e-09!5;UBERON:0004907!6.44e-09!5 | |ontology_enrichment_uberon=UBERON:0000160!5.00e-22!27;UBERON:0005409!6.20e-17!35;UBERON:0000059!1.23e-14!11;UBERON:0001301!1.78e-11!1;UBERON:0001242!2.68e-11!4;UBERON:0001262!2.68e-11!4;UBERON:0004786!2.68e-11!4;UBERON:0004808!2.68e-11!4;UBERON:0001277!2.68e-11!4;UBERON:0001052!6.33e-11!4;UBERON:0001155!1.48e-10!9;UBERON:0003350!3.25e-09!5;UBERON:0004907!6.44e-09!5 | ||
|ontology_enrichment_uberon_v019=UBERON:0000160;2.79e-28;17!UBERON:0002108;2.35e-26;4!UBERON:0005409;4.18e-22;22!UBERON:0001301;1.78e-15;1!UBERON:0001242;1.79e-15;4!UBERON:0001262;1.79e-15;4!UBERON:0004786;1.79e-15;4!UBERON:0004808;1.79e-15;4!UBERON:0001277;1.79e-15;4!UBERON:0004921;5.15e-14;33!UBERON:0000485;3.04e-09;7!UBERON:0003929;3.04e-09;7!UBERON:0003350;3.38e-08;8!UBERON:0001155;3.19e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0000160;2.79e-28;17!UBERON:0002108;2.35e-26;4!UBERON:0005409;4.18e-22;22!UBERON:0001301;1.78e-15;1!UBERON:0001242;1.79e-15;4!UBERON:0001262;1.79e-15;4!UBERON:0004786;1.79e-15;4!UBERON:0004808;1.79e-15;4!UBERON:0001277;1.79e-15;4!UBERON:0004921;5.15e-14;33!UBERON:0000485;3.04e-09;7!UBERON:0003929;3.04e-09;7!UBERON:0003350;3.38e-08;8!UBERON:0001155;3.19e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.85e-28,17;UBERON:0002108,2.35e-26,4;UBERON:0005409,1.58e-19,25;UBERON:0001301,1.54e-15,1;UBERON:0001242,1.79e-15,4;UBERON:0001262,1.79e-15,4;UBERON:0004786,1.79e-15,4;UBERON:0004808,1.79e-15,4;UBERON:0001277,1.79e-15,4;UBERON:0003350,3.38e-08,8;UBERON:0000485,2.22e-07,9;UBERON:0001155,3.24e-07,9;UBERON:0004921,5.75e-07,118 | |||
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|short_description=p3@TFEC | |short_description=p3@TFEC | ||
}} | }} |
Latest revision as of 06:37, 25 September 2015
Short description: | p3@TFEC |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TFEC_5end |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | 0bp_to_ENST00000497829, NM_001244583, uc003vhm.1_5end |
EntrezGene: | TFEC |
HGNC: | 11754 |
UniProt: | O14948 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 1.79e-15 | 4 |
epithelial cell of large intestine | 1.61e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.85e-28 | 17 |
small intestine | 2.35e-26 | 4 |
gastrointestinal system | 1.58e-19 | 25 |
epididymis | 1.54e-15 | 1 |
intestinal mucosa | 1.79e-15 | 4 |
wall of intestine | 1.79e-15 | 4 |
gastrointestinal system mucosa | 1.79e-15 | 4 |
gastrointestinal system epithelium | 1.79e-15 | 4 |
intestinal epithelium | 1.79e-15 | 4 |
epithelium of mucosa | 3.38e-08 | 8 |
simple columnar epithelium | 2.22e-07 | 9 |
colon | 3.24e-07 | 9 |
subdivision of digestive tract | 5.75e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.67e-08 | 2 |