FFCP PHASE1:Hg19::chr1:221053049..221053075,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3142 | |EntrezGene=3142 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4978 | |HGNC=4978 | ||
|TSSclassifier=strong | |||
|UniProt=Q14774 | |UniProt=Q14774 | ||
|association_with_transcript=306bp_to_NM_021958,uc001hmv.3_5end | |association_with_transcript=306bp_to_NM_021958,uc001hmv.3_5end | ||
|cluster_id=chr1:221053049..221053075,+ | |||
|coexpression_cluster_id=C7 | |coexpression_cluster_id=C7 | ||
|description=CAGE_peak_3_at_HLX_5end | |description=CAGE_peak_3_at_HLX_5end | ||
|id=chr1:221053049..221053075,+ | |id=chr1:221053049..221053075,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.23e-26!76;CL:0002009!3.46e-25!65;CL:0000557!1.42e-24!71;CL:0002194!3.43e-24!63;CL:0000576!3.43e-24!63;CL:0000040!3.43e-24!63;CL:0000559!3.43e-24!63;CL:0000839!3.80e-21!70;CL:0000048!2.15e-19!430;CL:0002057!3.64e-19!42;CL:0000860!1.28e-18!45;CL:0000763!4.65e-18!112;CL:0000049!4.65e-18!112;CL:0000723!1.81e-17!436;CL:0002320!3.78e-16!365;CL:0000034!4.17e-16!444;CL:0000134!2.70e-15!358;CL:0000219!2.07e-11!390;CL:0000115!2.56e-08!35;CL:0000222!3.69e-07!119 | |ontology_enrichment_celltype=CL:0000766!1.23e-26!76;CL:0002009!3.46e-25!65;CL:0000557!1.42e-24!71;CL:0002194!3.43e-24!63;CL:0000576!3.43e-24!63;CL:0000040!3.43e-24!63;CL:0000559!3.43e-24!63;CL:0000839!3.80e-21!70;CL:0000048!2.15e-19!430;CL:0002057!3.64e-19!42;CL:0000860!1.28e-18!45;CL:0000763!4.65e-18!112;CL:0000049!4.65e-18!112;CL:0000723!1.81e-17!436;CL:0002320!3.78e-16!365;CL:0000034!4.17e-16!444;CL:0000134!2.70e-15!358;CL:0000219!2.07e-11!390;CL:0000115!2.56e-08!35;CL:0000222!3.69e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0000860;6.70e-22;33!CL:0002057;6.70e-22;33!CL:0000473;4.45e-20;39!CL:0000234;4.45e-20;39!CL:0000576;3.89e-16;48!CL:0000766;8.76e-12;69!CL:0000115;2.32e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0002009,3.56e-27,61;CL:0000766,1.57e-26,72;CL:0002194,5.33e-26,59;CL:0000576,5.33e-26,59;CL:0000040,5.33e-26,59;CL:0000559,5.33e-26,59;CL:0000557,1.24e-24,67;CL:0000473,4.57e-23,48;CL:0000234,4.57e-23,48;CL:0000839,2.41e-21,66;CL:0000860,8.39e-21,42;CL:0002057,8.39e-21,42;CL:0000048,4.89e-19,427;CL:0000723,9.30e-18,433;CL:0000763,9.95e-18,108;CL:0000049,9.95e-18,108;CL:0000034,6.95e-17,441;CL:0002320,3.37e-15,361;CL:0000134,1.43e-14,354;CL:0000219,2.83e-10,386;CL:0000738,1.73e-08,136;CL:0000115,2.29e-08,36;CL:0000222,2.46e-07,121 | |||
|ontology_enrichment_development_v019=CL:0002057;9.19e-16;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!5.09e-28!216;UBERON:0002193!2.05e-26!112;UBERON:0002204!4.97e-26!167;UBERON:0002371!7.57e-25!80;UBERON:0002390!1.10e-24!102;UBERON:0003061!1.10e-24!102;UBERON:0002405!4.01e-24!115;UBERON:0001474!1.17e-22!86;UBERON:0004765!2.26e-21!101;UBERON:0001434!2.26e-21!101;UBERON:0000926!2.90e-19!448;UBERON:0004120!2.90e-19!448;UBERON:0006603!2.90e-19!448;UBERON:0002384!4.46e-16!375;UBERON:0001009!5.53e-11!113;UBERON:0004535!8.76e-11!110;UBERON:0000055!1.74e-09!69;UBERON:0004872!3.76e-09!84;UBERON:0000467!5.98e-09!625;UBERON:0001981!9.62e-09!60;UBERON:0007500!9.62e-09!60;UBERON:0004537!9.62e-09!60;UBERON:0006965!9.62e-09!60;UBERON:0000480!9.85e-09!626;UBERON:0000479!1.40e-08!787;UBERON:0000468!7.44e-08!659;UBERON:0002049!1.09e-07!79;UBERON:0007798!1.09e-07!79 | |ontology_enrichment_uberon=UBERON:0003081!5.09e-28!216;UBERON:0002193!2.05e-26!112;UBERON:0002204!4.97e-26!167;UBERON:0002371!7.57e-25!80;UBERON:0002390!1.10e-24!102;UBERON:0003061!1.10e-24!102;UBERON:0002405!4.01e-24!115;UBERON:0001474!1.17e-22!86;UBERON:0004765!2.26e-21!101;UBERON:0001434!2.26e-21!101;UBERON:0000926!2.90e-19!448;UBERON:0004120!2.90e-19!448;UBERON:0006603!2.90e-19!448;UBERON:0002384!4.46e-16!375;UBERON:0001009!5.53e-11!113;UBERON:0004535!8.76e-11!110;UBERON:0000055!1.74e-09!69;UBERON:0004872!3.76e-09!84;UBERON:0000467!5.98e-09!625;UBERON:0001981!9.62e-09!60;UBERON:0007500!9.62e-09!60;UBERON:0004537!9.62e-09!60;UBERON:0006965!9.62e-09!60;UBERON:0000480!9.85e-09!626;UBERON:0000479!1.40e-08!787;UBERON:0000468!7.44e-08!659;UBERON:0002049!1.09e-07!79;UBERON:0007798!1.09e-07!79 | ||
|ontology_enrichment_uberon_v019= | |||
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|phase1_expression=1.99846217197612,1.2846031433459,1.9733616573436,3.00219895059391,0.446961094427288,0.872338524100369,2.53299878168311,5.68547886084148,3.3954131665979,0.737201809504527,0,0,0,1.8564952944007,1.98838425436749,5.3786011716142,5.42425075221579,6.57279081348636,6.34312638427659,0.492484232307152,0.408001382488506,0.940364164434263,0,0,0,0.0764134057479513,0,0,9.8341069212226,0.767658796194425,3.56077083626975,0,0,0,0,0,1.17440175733939,4.9859586767869,4.01088894940283,5.20826089718044,6.04571780447796,8.74512898251245,11.3333249759042,3.19876125315042,3.40088349319928,2.66842467306598,6.97287110717054,7.81218987241469,9.60089749774821,22.1523142088056,20.7490172288572,11.3511470346521,14.1345729102014,12.9096936716765,4.06279459783025,4.70605848856512,7.36846605156184,2.69668181334102,8.57034898638527,11.2325159476633,7.67204550958849,24.7388475140037,26.1297391484338,19.1801137739712,10.447532590629,13.0498601678962,11.2108004819203,26.6323585172148,17.7304192262868,13.031330682307,10.2917915447673,9.94349617166425,5.69632297393592,0.845021145247767,1.06302149982522,1.25795187305026,4.94245977044578,5.70672192797724,5.46466994770072,0.285012743741249,0.59675003159727,0.547992461293902,0,0,0,0.426730222566507,1.20118796110804,0,0.661044872784862,0,1.70763890732835,0,0.382273228125229,2.64342657158052,0,1.05353633910031,0,0,0.205601498999509,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0.255973222308837,1.24930726552346,0.236777252044017,0,0,0,0,2.43806866313962,1.34140171940727,0.511450247374121,1.80719576192283,2.50668955317945,2.02785126545153,0,0.973269740605272,0,0,0,1.24430121722827,0,0,10.3855165969499,8.18409765306556,8.90818335476397,0.238490624305342,1.14398982156026,0,1.98762407366705,4.30117297553062,1.73570250803797,1.13061588384802,3.77549492588915,3.57653454522088,5.01587919688345,2.32575083252396,1.42306505074684,3.01248551488203,2.01414658554573,2.28081631715554,5.6134273236079,0.735326160691737,3.24056779152704,0.892997282840798,1.12264686313085,4.27923625836624,1.53316637465883,3.79706263827252,2.93122790288652,5.27121669744253,3.87780264148325,0,1.49091585508596,0.633152558322899,2.91300197789081,1.72101972449288,1.06400514659507,0.560677600142307,0,3.7000132262574,0.622422070799533,0.269421344139376,0.653847612453835,0.605429710579726,0.576175924479999,3.74914290934075,3.74592092196385,2.85235910772225,3.43731965269142,1.40921398372518,0.485618833104395,0.842704840213491,2.04154171254893,0.61417158655884,6.09622108937016,2.37600571456411,2.22540236350701,3.64064544775211,18.6840716872222,0.673344455816265,0.750711119231785,1.6623846929051,0.438977620880838,1.83892677479412,1.95309476578576,0.340296549480063,0.717558542755448,1.49490172172997,2.54318281391474,3.90118424909723,1.8549455262919,1.03056216018252,1.11670113798954,2.19409231913646,0.389748020644795,3.02920529092937,1.65689817556139,3.23292113637624,1.77504796258307,0.705264687593482,0.847802961552438,0,0,0.286804595389004,0,0,0.116193942869518,0,0,0,0,1.92972281457866,2.76269842704961,6.96551892047969,2.16563844500876,0.709840800239063,0.674338760312407,0.241011029883482,0.992645754591546,1.08939722046203,0.949082476444386,0.943819157121151,0.392442930250692,0.769494313892781,4.42893272774789,4.20725321410337,4.9388881359768,5.88034845542168,2.53510069643662,2.94848165003288,3.54473944008842,0,0,0,0,0,0,0,0.977424915930974,4.15973914111831,0,0.115930404975077,0.117408694235822,0.866198686566443,1.38895653772983,0.761016608938393,0,0,2.21595305478658,1.63802985597466,2.22946743433092,0.93733833986777,0,0,0.0895585227028483,0,0,0.492663237895943,0.792435906119034,0.829312462163088,0.576479813667846,1.51490920111656,0.825472625798197,2.29193055334967,2.34434894420094,0,0.205654985406647,1.50171528921959,0,0,0,0,4.39523833576444,25.0359512096318,3.381211010224,1.59562869950922,7.28052058379563,1.80045161983499,1.41849132023278,1.5985330740966,2.43062589218851,7.5967024754802,1.64648067356154,1.62868092146868,0.355391948742546,0,3.61727252471503,2.61460037580088,3.39908170018994,3.64871341923571,9.04062764577828,4.21667878966063,0.239624855491583,1.14861935834114,0,0.723906533337896,0.205476322550383,0.537182889719687,0,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0.167516265334349,0,10.4860983352606,17.9496875522415,22.7928532389819,1.71768088406796,5.50187573165645,0.271265023699736,1.87173775377726,3.21172179834891,2.05013139544115,1.52283839490527,3.00946099727719,4.5481500811197,9.31257641632544,0,1.84369168541703,1.39013783148933,0.783204629850962,1.37257369524342,1.44737618286021,3.66714141391649,1.81436848265855,0,0,0.30239029332968,1.73675465473144,1.2276957863045,1.12264037773229,2.05022638809122,0.511707249066704,1.28683136914886,0,2.15893571323718,4.08391968220192,1.56041596426237,0.519254429183621,1.74315567689939,0,0,0,0.459257792658427,1.63882051206045,2.75361271414791,0.451199612907412,0.0770153371044148,0,0,0,7.96133688496276,1.70093705276516,1.511411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| ||
|short_description=p3@HLX | |short_description=p3@HLX | ||
}} | }} |
Latest revision as of 07:03, 25 September 2015
Short description: | p3@HLX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HLX_5end |
Coexpression cluster: | C7_CD14_Eosinophils_Neutrophils_Smooth_Basophils_Macrophage_Mast |
Association with transcript: | 306bp_to_NM_021958, uc001hmv.3_5end |
EntrezGene: | HLX |
HGNC: | 4978 |
UniProt: | Q14774 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage dendritic cell progenitor | 3.56e-27 | 61 |
myeloid leukocyte | 1.57e-26 | 72 |
monopoietic cell | 5.33e-26 | 59 |
monocyte | 5.33e-26 | 59 |
monoblast | 5.33e-26 | 59 |
promonocyte | 5.33e-26 | 59 |
granulocyte monocyte progenitor cell | 1.24e-24 | 67 |
defensive cell | 4.57e-23 | 48 |
phagocyte | 4.57e-23 | 48 |
myeloid lineage restricted progenitor cell | 2.41e-21 | 66 |
classical monocyte | 8.39e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.39e-21 | 42 |
multi fate stem cell | 4.89e-19 | 427 |
somatic stem cell | 9.30e-18 | 433 |
myeloid cell | 9.95e-18 | 108 |
common myeloid progenitor | 9.95e-18 | 108 |
stem cell | 6.95e-17 | 441 |
connective tissue cell | 3.37e-15 | 361 |
mesenchymal cell | 1.43e-14 | 354 |
motile cell | 2.83e-10 | 386 |
leukocyte | 1.73e-08 | 136 |
endothelial cell | 2.29e-08 | 36 |
mesodermal cell | 2.46e-07 | 121 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 4.05e-33 | 203 |
mesoderm | 8.04e-31 | 315 |
mesoderm-derived structure | 8.04e-31 | 315 |
presumptive mesoderm | 8.04e-31 | 315 |
hemolymphoid system | 1.72e-26 | 108 |
musculoskeletal system | 1.58e-25 | 167 |
bone marrow | 2.26e-25 | 76 |
hematopoietic system | 2.47e-25 | 98 |
blood island | 2.47e-25 | 98 |
immune system | 6.02e-24 | 93 |
bone element | 1.96e-22 | 82 |
skeletal element | 3.28e-21 | 90 |
skeletal system | 1.15e-20 | 100 |
connective tissue | 8.96e-15 | 371 |
circulatory system | 4.83e-11 | 112 |
cardiovascular system | 8.37e-11 | 109 |
vessel | 1.40e-09 | 68 |
epithelial tube open at both ends | 3.92e-09 | 59 |
blood vessel | 3.92e-09 | 59 |
blood vasculature | 3.92e-09 | 59 |
vascular cord | 3.92e-09 | 59 |
splanchnic layer of lateral plate mesoderm | 5.69e-09 | 83 |
vasculature | 9.45e-08 | 78 |
vascular system | 9.45e-08 | 78 |
tissue | 2.08e-07 | 773 |