FFCP PHASE1:Hg19::chr14:69446034..69446048,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=87 | |EntrezGene=87 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=163 | |HGNC=163 | ||
|TSSclassifier=strong | |||
|UniProt=P12814,Q1HE25 | |UniProt=P12814,Q1HE25 | ||
|association_with_transcript=34bp_to_NM_001102,NM_001130004,NM_001130005,uc001xkl.2,uc001xkm.2,uc001xkn.2_5end | |association_with_transcript=34bp_to_NM_001102,NM_001130004,NM_001130005,uc001xkl.2,uc001xkm.2,uc001xkn.2_5end | ||
|cluster_id=chr14:69446034..69446048,- | |||
|coexpression_cluster_id=C2309 | |coexpression_cluster_id=C2309 | ||
|description=CAGE_peak_4_at_ACTN1_5end | |description=CAGE_peak_4_at_ACTN1_5end | ||
|id=chr14:69446034..69446048,- | |id=chr14:69446034..69446048,- | ||
|ontology_enrichment_celltype=CL:0000055!1.53e-14!180;CL:0000222!2.56e-13!119;CL:0002321!4.65e-11!248;CL:0000220!5.09e-11!246;CL:0002371!7.46e-11!591;CL:0000183!2.24e-10!59;CL:0000548!3.11e-10!679;CL:0000004!3.11e-10!679;CL:0000255!3.11e-10!679;CL:0000144!5.90e-10!625;CL:0000012!1.33e-09!682;CL:0000057!1.68e-09!75;CL:1000449!1.94e-09!16;CL:0000192!3.20e-09!42;CL:0000514!3.20e-09!42;CL:0000187!5.18e-09!54;CL:0000680!1.25e-08!57;CL:0000056!1.25e-08!57;CL:0000355!1.25e-08!57;CL:0000115!1.49e-08!35;CL:0002078!4.57e-08!44;CL:0002681!5.30e-08!13;CL:0002584!5.30e-08!13;CL:1000497!1.35e-07!18;CL:0002518!1.35e-07!18;CL:1000507!5.94e-07!12;CL:1000494!5.94e-07!12;CL:0000393!7.20e-07!60;CL:0000211!7.20e-07!60 | |ontology_enrichment_celltype=CL:0000055!1.53e-14!180;CL:0000222!2.56e-13!119;CL:0002321!4.65e-11!248;CL:0000220!5.09e-11!246;CL:0002371!7.46e-11!591;CL:0000183!2.24e-10!59;CL:0000548!3.11e-10!679;CL:0000004!3.11e-10!679;CL:0000255!3.11e-10!679;CL:0000144!5.90e-10!625;CL:0000012!1.33e-09!682;CL:0000057!1.68e-09!75;CL:1000449!1.94e-09!16;CL:0000192!3.20e-09!42;CL:0000514!3.20e-09!42;CL:0000187!5.18e-09!54;CL:0000680!1.25e-08!57;CL:0000056!1.25e-08!57;CL:0000355!1.25e-08!57;CL:0000115!1.49e-08!35;CL:0002078!4.57e-08!44;CL:0002681!5.30e-08!13;CL:0002584!5.30e-08!13;CL:1000497!1.35e-07!18;CL:0002518!1.35e-07!18;CL:1000507!5.94e-07!12;CL:1000494!5.94e-07!12;CL:0000393!7.20e-07!60;CL:0000211!7.20e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:1000449;1.91e-09;15!CL:0002681;4.90e-08;12!CL:0002584;4.90e-08;12!CL:0000115;1.17e-07;36!CL:1000497;1.44e-07;17!CL:0002518;1.44e-07;17!CL:0000192;4.79e-07;43 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,8.37e-14,121;CL:0002321,1.85e-11,250;CL:0000057,6.48e-10,76;CL:1000449,1.92e-09,15;CL:0000192,2.39e-09,43;CL:0000514,2.39e-09,43;CL:0000187,3.81e-09,55;CL:0000115,6.17e-09,36;CL:0000680,9.17e-09,58;CL:0000056,9.17e-09,58;CL:0000355,9.17e-09,58;CL:0002078,2.01e-08,45;CL:0002681,5.20e-08,12;CL:0002584,5.20e-08,12;CL:1000497,1.59e-07,17;CL:0002518,1.59e-07,17;CL:0000393,5.34e-07,61;CL:0000211,5.34e-07,61 | |||
|ontology_enrichment_development_v019=CL:0000514;4.79e-07;43 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005256!1.31e-13!143;UBERON:0003914!3.94e-13!118;UBERON:0002049!4.08e-13!79;UBERON:0007798!4.08e-13!79;UBERON:0000055!7.81e-13!69;UBERON:0001981!1.98e-12!60;UBERON:0007500!1.98e-12!60;UBERON:0004537!1.98e-12!60;UBERON:0006965!1.98e-12!60;UBERON:0004535!2.39e-10!110;UBERON:0002100!2.70e-10!216;UBERON:0000119!3.26e-10!312;UBERON:0004872!4.25e-10!84;UBERON:0000483!4.41e-10!309;UBERON:0001009!6.32e-10!113;UBERON:0000914!9.93e-10!83;UBERON:0002329!9.93e-10!83;UBERON:0003077!9.93e-10!83;UBERON:0003059!9.93e-10!83;UBERON:0007282!9.93e-10!83;UBERON:0009618!9.93e-10!83;UBERON:0007285!9.93e-10!83;UBERON:0001637!1.64e-09!42;UBERON:0003509!1.64e-09!42;UBERON:0004572!1.64e-09!42;UBERON:0004211!1.94e-09!16;UBERON:0001285!1.94e-09!16;UBERON:0007684!1.94e-09!16;UBERON:0003220!1.94e-09!16;UBERON:0004208!1.94e-09!16;UBERON:0000353!5.07e-09!17;UBERON:0000486!7.40e-09!82;UBERON:0006555!8.61e-09!17;UBERON:0005103!8.61e-09!17;UBERON:0000083!8.61e-09!17;UBERON:0009201!8.61e-09!17;UBERON:0004819!8.61e-09!17;UBERON:0006553!8.61e-09!17;UBERON:0003074!8.61e-09!17;UBERON:0003060!8.61e-09!17;UBERON:0000490!2.13e-08!138;UBERON:0004290!2.19e-08!70;UBERON:0000475!2.54e-08!365;UBERON:0000080!2.92e-08!18;UBERON:0002120!2.92e-08!18;UBERON:0004875!2.92e-08!18;UBERON:0005721!2.92e-08!18;UBERON:0005754!2.92e-08!18;UBERON:0007297!2.92e-08!18;UBERON:0001851!4.30e-08!16;UBERON:0001225!5.30e-08!13;UBERON:0008987!5.30e-08!13;UBERON:0000468!6.95e-08!659;UBERON:0000467!8.51e-08!625;UBERON:0004876!9.70e-08!20;UBERON:0003102!1.18e-07!95;UBERON:0000480!1.48e-07!626;UBERON:0004573!2.82e-07!33;UBERON:0004571!2.82e-07!33;UBERON:0003064!3.37e-07!37;UBERON:0003081!3.67e-07!216;UBERON:0001134!4.01e-07!61;UBERON:0002036!4.01e-07!61;UBERON:0003082!4.01e-07!61;UBERON:0009773!5.94e-07!12;UBERON:0001231!5.94e-07!12;UBERON:0004810!5.94e-07!12;UBERON:0002385!7.13e-07!63;UBERON:0001015!7.13e-07!63;UBERON:0000383!7.13e-07!63 | |ontology_enrichment_uberon=UBERON:0005256!1.31e-13!143;UBERON:0003914!3.94e-13!118;UBERON:0002049!4.08e-13!79;UBERON:0007798!4.08e-13!79;UBERON:0000055!7.81e-13!69;UBERON:0001981!1.98e-12!60;UBERON:0007500!1.98e-12!60;UBERON:0004537!1.98e-12!60;UBERON:0006965!1.98e-12!60;UBERON:0004535!2.39e-10!110;UBERON:0002100!2.70e-10!216;UBERON:0000119!3.26e-10!312;UBERON:0004872!4.25e-10!84;UBERON:0000483!4.41e-10!309;UBERON:0001009!6.32e-10!113;UBERON:0000914!9.93e-10!83;UBERON:0002329!9.93e-10!83;UBERON:0003077!9.93e-10!83;UBERON:0003059!9.93e-10!83;UBERON:0007282!9.93e-10!83;UBERON:0009618!9.93e-10!83;UBERON:0007285!9.93e-10!83;UBERON:0001637!1.64e-09!42;UBERON:0003509!1.64e-09!42;UBERON:0004572!1.64e-09!42;UBERON:0004211!1.94e-09!16;UBERON:0001285!1.94e-09!16;UBERON:0007684!1.94e-09!16;UBERON:0003220!1.94e-09!16;UBERON:0004208!1.94e-09!16;UBERON:0000353!5.07e-09!17;UBERON:0000486!7.40e-09!82;UBERON:0006555!8.61e-09!17;UBERON:0005103!8.61e-09!17;UBERON:0000083!8.61e-09!17;UBERON:0009201!8.61e-09!17;UBERON:0004819!8.61e-09!17;UBERON:0006553!8.61e-09!17;UBERON:0003074!8.61e-09!17;UBERON:0003060!8.61e-09!17;UBERON:0000490!2.13e-08!138;UBERON:0004290!2.19e-08!70;UBERON:0000475!2.54e-08!365;UBERON:0000080!2.92e-08!18;UBERON:0002120!2.92e-08!18;UBERON:0004875!2.92e-08!18;UBERON:0005721!2.92e-08!18;UBERON:0005754!2.92e-08!18;UBERON:0007297!2.92e-08!18;UBERON:0001851!4.30e-08!16;UBERON:0001225!5.30e-08!13;UBERON:0008987!5.30e-08!13;UBERON:0000468!6.95e-08!659;UBERON:0000467!8.51e-08!625;UBERON:0004876!9.70e-08!20;UBERON:0003102!1.18e-07!95;UBERON:0000480!1.48e-07!626;UBERON:0004573!2.82e-07!33;UBERON:0004571!2.82e-07!33;UBERON:0003064!3.37e-07!37;UBERON:0003081!3.67e-07!216;UBERON:0001134!4.01e-07!61;UBERON:0002036!4.01e-07!61;UBERON:0003082!4.01e-07!61;UBERON:0009773!5.94e-07!12;UBERON:0001231!5.94e-07!12;UBERON:0004810!5.94e-07!12;UBERON:0002385!7.13e-07!63;UBERON:0001015!7.13e-07!63;UBERON:0000383!7.13e-07!63 | ||
|ontology_enrichment_uberon_v019=UBERON:0006555;1.91e-09;15!UBERON:0004819;1.91e-09;15!UBERON:0001285;1.91e-09;15!UBERON:0007684;1.91e-09;15!UBERON:0003914;1.14e-08;74!UBERON:0000353;1.93e-08;15!UBERON:0001851;4.78e-08;15!UBERON:0001225;4.90e-08;12!UBERON:0008987;4.90e-08;12!UBERON:0001637;2.48e-07;42!UBERON:0003509;2.48e-07;42!UBERON:0004572;2.48e-07;42!UBERON:0007500;3.36e-07;56!UBERON:0001981;3.36e-07;56!UBERON:0004537;3.36e-07;56 | |||
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| ||
|short_description=p4@ACTN1 | |short_description=p4@ACTN1 | ||
}} | }} |
Latest revision as of 07:32, 25 September 2015
Short description: | p4@ACTN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ACTN1_5end |
Coexpression cluster: | C2309_hepatic_Fibroblast_Hepatic_Smooth_Urothelial_aorta_Olfactory |
Association with transcript: | 34bp_to_NM_001102, NM_001130004, NM_001130005, uc001xkl.2, uc001xkm.2, uc001xkn.2_5end |
EntrezGene: | ACTN1 |
HGNC: | 163 |
UniProt: | P12814Q1HE25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 8.37e-14 | 121 |
embryonic cell | 1.85e-11 | 250 |
fibroblast | 6.48e-10 | 76 |
epithelial cell of nephron | 1.92e-09 | 15 |
smooth muscle cell | 2.39e-09 | 43 |
smooth muscle myoblast | 2.39e-09 | 43 |
muscle cell | 3.81e-09 | 55 |
endothelial cell | 6.17e-09 | 36 |
muscle precursor cell | 9.17e-09 | 58 |
myoblast | 9.17e-09 | 58 |
multi-potent skeletal muscle stem cell | 9.17e-09 | 58 |
meso-epithelial cell | 2.01e-08 | 45 |
kidney cortical cell | 5.20e-08 | 12 |
renal cortical epithelial cell | 5.20e-08 | 12 |
kidney cell | 1.59e-07 | 17 |
kidney epithelial cell | 1.59e-07 | 17 |
electrically responsive cell | 5.34e-07 | 61 |
electrically active cell | 5.34e-07 | 61 |