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FFCP PHASE1:Mm9::chr5:136108551..136108564,+: Difference between revisions

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(Created page with "{{FFCP |id=chr5:136108551..136108564,+ |short_description=p3@Rhbdd2 |description=CAGE_peak_3_at_Rhbdd2_5end |association_with_transcript=-9bp_to_ENSMUST00000130647_5end |...")
 
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{{FFCP
{{FFCP
|id=chr5:136108551..136108564,+
|DHSsupport=NA
|short_description=p3@Rhbdd2
|DPIdataset=NA
|description=CAGE_peak_3_at_Rhbdd2_5end
|association_with_transcript=-9bp_to_ENSMUST00000130647_5end
|EntrezGene=215160
|EntrezGene=215160
|HGNC=
|HGNC=
|MCL_coexpression_id=747
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-9bp_to_ENSMUST00000130647_5end
|cluster_id=chr5:136108551..136108564,+
|description=CAGE_peak_3_at_Rhbdd2_5end
|id=chr5:136108551..136108564,+
|ontology_enrichment_celltype=CL:0000221!1.95e-12!44;CL:0000133!1.95e-12!44;CL:0002321!3.18e-12!70;CL:0000220!3.18e-12!70;CL:0002319!3.46e-12!43;CL:0000117!1.15e-11!23;CL:0000337!1.15e-11!23;CL:0000055!5.85e-11!50;CL:0000144!4.57e-09!121;CL:0000012!4.57e-09!121;CL:0000540!6.08e-09!33;CL:0000047!6.08e-09!33;CL:0000031!6.08e-09!33;CL:0000404!6.08e-09!33;CL:0000548!1.71e-08!115;CL:0000004!1.71e-08!115;CL:0000255!1.71e-08!115;CL:0000393!2.05e-08!39;CL:0000211!2.05e-08!39;CL:0002371!4.07e-08!118
|ontology_enrichment_celltype_v019_2=CL:0000117,1.48e-30,23;CL:0000337,1.48e-30,23;CL:0002319,2.66e-23,43;CL:0000221,1.16e-22,44;CL:0000133,1.16e-22,44;CL:0000540,4.31e-20,33;CL:0000047,4.31e-20,33;CL:0000031,4.31e-20,33;CL:0000404,4.31e-20,33;CL:0002321,1.68e-18,70;CL:0000393,2.16e-16,39;CL:0000211,2.16e-16,39;CL:0002614,1.67e-09,3;CL:0000723,1.73e-09,91;CL:0000048,1.73e-09,91;CL:0002612,7.80e-09,3;CL:0000034,1.35e-08,97;CL:0000878,7.62e-07,2;CL:0000129,7.62e-07,2
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000073!3.19e-17!75;UBERON:0001016!3.19e-17!75;UBERON:0001017!6.66e-17!73;UBERON:0005743!6.66e-17!73;UBERON:0001049!1.14e-14!52;UBERON:0005068!1.14e-14!52;UBERON:0006241!1.14e-14!52;UBERON:0007135!1.14e-14!52;UBERON:0004121!8.57e-14!102;UBERON:0000924!8.57e-14!102;UBERON:0006601!8.57e-14!102;UBERON:0000955!6.34e-13!50;UBERON:0006238!6.34e-13!50;UBERON:0002346!1.73e-12!71;UBERON:0003075!1.73e-12!71;UBERON:0007284!1.73e-12!71;UBERON:0002616!2.43e-12!49;UBERON:0002020!6.15e-12!34;UBERON:0000033!3.07e-11!63;UBERON:0003080!3.05e-10!40;UBERON:0002780!8.06e-10!39;UBERON:0001890!8.06e-10!39;UBERON:0006240!8.06e-10!39;UBERON:0003056!4.22e-09!49;UBERON:0002791!7.69e-09!29;UBERON:0003528!7.69e-09!29;UBERON:0001893!7.69e-09!29;UBERON:0007811!8.65e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0001016,9.55e-19,75;UBERON:0001017,9.03e-18,73;UBERON:0002020,1.40e-16,34;UBERON:0001948,6.41e-14,5;UBERON:0002315,6.41e-14,5;UBERON:0000073,1.02e-13,54;UBERON:0004121,1.38e-13,95;UBERON:0000924,1.38e-13,95;UBERON:0006601,1.38e-13,95;UBERON:0002240,1.54e-11,6;UBERON:0005174,1.54e-11,6;UBERON:0001137,1.54e-11,6;UBERON:0001049,5.70e-11,52;UBERON:0005068,5.70e-11,52;UBERON:0006241,5.70e-11,52;UBERON:0007135,5.70e-11,52;UBERON:0002038,1.67e-09,3;UBERON:0009663,1.67e-09,3;UBERON:0009661,1.67e-09,3;UBERON:0000125,1.67e-09,3;UBERON:0002308,1.67e-09,3;UBERON:0002257,7.80e-09,3;UBERON:0003528,9.62e-09,29;UBERON:0002791,9.62e-09,29;UBERON:0001893,9.62e-09,29;UBERON:0002420,1.72e-08,8;UBERON:0007245,1.72e-08,8;UBERON:0010009,1.72e-08,8;UBERON:0010011,1.72e-08,8;UBERON:0000454,1.72e-08,8;UBERON:0002346,3.27e-08,64;UBERON:0003075,3.27e-08,64;UBERON:0007284,3.27e-08,64;UBERON:0003076,1.22e-07,12;UBERON:0003057,1.22e-07,12;UBERON:0002950,3.33e-07,4;UBERON:0001891,3.33e-07,4;UBERON:0009616,3.33e-07,4;UBERON:0010286,3.33e-07,4;UBERON:0010371,9.48e-07,73
|phase1_expression=0.640595388419176,0.697950815278722,0.454999239389536,0.30246421130683,0,0.16787927191189,0.233612640595526,0.258246646883153,0.281577444303333,0,0.171217968225505,0.0797721589953364,0.513602189793617,0.437102012094987,0,0.202475267389826,0,0.315462165358238,0,0,1.10556277196391,0.0992909512008853,0.261199789138935,0.319984845586813,0,0,1.7230479846363,0.430942465371778,0.380046838912748,0.252030129759931,0,0.635030673459631,0,0,0,0.332469290716985,0.408338712524738,0,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0.125896817975577,0.101376931219515,0.734187008646726,0.782391344348039,0.436050312760893,0.878744730937887,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0,0.515672092277442,1.41621522601718,0,2.53532561402472,0,0,0.449949858640699,0,1.4209602298922,3.59520132622086,6.14749288514487,1.34796496001021,1.08004750665353,0.630974884054146,3.71346279724945,3.97563373712904,0.61245399607477,1.15014565221884,0.919218786610021,0,5.10749352340751,3.99376986466233,1.05509030184155,2.56165402086747,0.52091337055676,4.18774498502071,3.93933827022176,5.34793867218835,4.71405736757868,2.70506193518296,1.3047961207771,1.13589289999776,0.151143120213571,0.289864488701678,0,1.3599426674155,1.07940638327563,0,0.896053774194671,0.421333260395256,0.511290967734173,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0.649473123033642,1.01343946190039,1.51657333504435,0.79928715803342,0,0.593768556259299,0.346970653532272,0,0.230615497256059,0.301445281105245,0.23517741427141,0.376999773989026,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,1.25668024088073,0,0.239630249011841,0.599902730993408,0.381210681219194,0.748953197024114,0.457500602818626,0.376963056338593,0.695297280769106,0.255715457330331,0.83115217823824,0.648965052271031,0.101839363850316,0,0,0,0.260240885925407,0,0.180062129805349,0.60281927134286,0.340182495756639,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0.257347907114715,0.284163499395593,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0,0,0,0,0.841159794256509,0.411618449517138,0,0.528901133327089,0,0,0,0,0,0,0.949058123089023,0,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0,0.228497025219458,0,0,0.387904974335251,0.140271639780637,0.316182685621286,0.147610147979602,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0.54390568381871,0,0.275936746304732,0.481651769963376,0.234423373184406,0,0.252470927204373,0.315508219416257,0,0,0.477937595905104,0.222798674082394,0,0,0.292255857911312,0.395287777946524,1.60660658210904,0,0,0.488660878060728,0,0,0.242780636154981,0,0.377210159511796,0,0.922305443831782,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0.388076051348264,0,0.354680467284547,0.356737635204141,0.987294123612726,0.913394847343798,0.23467170806371,0.42366414172764,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.18542530201051,0.170870880797853,0,0,0,0,0.228778173206523,0.679913719975421,0.839708713941948,0.552799895217695,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0.218362563746178,0,0,0,0.259229946583586,0,1.12738587736838,0.149516546043979,0,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0.104859344425711,0.241584120826006,1.44015003128933,0,0.405450430580328,0.205421914329655,0,0,0.198681354781265,0.120195449519969,0.590758108698309,0,0,0.100826185136841,0,0.0962118416403295,0,0,0.221985953374065,0.269141569828427,0.167884616364078,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,0,0,1.84130094602871,0.572895513439397,2.06223818812425,0,0.755393897389701,0,0,0.906284817968409,1.03552062350364,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.468207537349412,0.512201219238954,0.574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0.25384382367503,0.182927972872773,0,0,0.561142271657738,0,0.394017929502254,0,0.309873682371932,0.385813221962283,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0,0.231867835620421
|phase1_expression=0.640595388419176,0.697950815278722,0.454999239389536,0.30246421130683,0,0.16787927191189,0.233612640595526,0.258246646883153,0.281577444303333,0,0.171217968225505,0.0797721589953364,0.513602189793617,0.437102012094987,0,0.202475267389826,0,0.315462165358238,0,0,1.10556277196391,0.0992909512008853,0.261199789138935,0.319984845586813,0,0,1.7230479846363,0.430942465371778,0.380046838912748,0.252030129759931,0,0.635030673459631,0,0,0,0.332469290716985,0.408338712524738,0,0,0.523523743973798,0.588231488031014,0,0.485510353031154,0.125896817975577,0.101376931219515,0.734187008646726,0.782391344348039,0.436050312760893,0.878744730937887,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0.257259436035947,0,0.515672092277442,1.41621522601718,0,2.53532561402472,0,0,0.449949858640699,0,1.4209602298922,3.59520132622086,6.14749288514487,1.34796496001021,1.08004750665353,0.630974884054146,3.71346279724945,3.97563373712904,0.61245399607477,1.15014565221884,0.919218786610021,0,5.10749352340751,3.99376986466233,1.05509030184155,2.56165402086747,0.52091337055676,4.18774498502071,3.93933827022176,5.34793867218835,4.71405736757868,2.70506193518296,1.3047961207771,1.13589289999776,0.151143120213571,0.289864488701678,0,1.3599426674155,1.07940638327563,0,0.896053774194671,0.421333260395256,0.511290967734173,0.259786004602869,0.35333957451034,0.422530259330042,0,0,0,0.649473123033642,1.01343946190039,1.51657333504435,0.79928715803342,0,0.593768556259299,0.346970653532272,0,0.230615497256059,0.301445281105245,0.23517741427141,0.376999773989026,0.247194967734374,0.144599356919912,0,0.161766849947409,0.220841518460394,0,0,0.292780797011547,1.25668024088073,0,0.239630249011841,0.599902730993408,0.381210681219194,0.748953197024114,0.457500602818626,0.376963056338593,0.695297280769106,0.255715457330331,0.83115217823824,0.648965052271031,0.101839363850316,0,0,0,0.260240885925407,0,0.180062129805349,0.60281927134286,0.340182495756639,0.2562274405697,0.0937017245597288,0.258703370739016,0.215567992932842,0,0,0.219195732427575,0.278047249225598,0,0,0,0,0.257347907114715,0.284163499395593,0.207125772535502,0,0.180062061461015,0,0,0.154267112887378,0,0,0.116765342367169,0,0.32833492815819,0,0,0,0,0.841159794256509,0.411618449517138,0,0.528901133327089,0,0,0,0,0,0,0.949058123089023,0,0,0.198956472041151,0.38992817423824,0,0.216138049874694,0,0,0.228497025219458,0,0,0.387904974335251,0.140271639780637,0.316182685621286,0.147610147979602,0.31399745568275,0,0,0,0.196558995113203,0,0,0,0,0.287696137450811,0.324270453550071,0,0,0.372140947668503,0,0,0.179397413521912,0,0.184753190166605,0.189491411770485,0.162964976442026,0,0,0,0,0,0.157635144106191,0,0.159454768657487,0.327726629431476,0.172684981865896,0,0,0.54390568381871,0,0.275936746304732,0.481651769963376,0.234423373184406,0,0.252470927204373,0.315508219416257,0,0,0.477937595905104,0.222798674082394,0,0,0.292255857911312,0.395287777946524,1.60660658210904,0,0,0.488660878060728,0,0,0.242780636154981,0,0.377210159511796,0,0.922305443831782,0,0.363533729477506,0,0,0,0,0.340439605753788,0,0.388076051348264,0,0.354680467284547,0.356737635204141,0.987294123612726,0.913394847343798,0.23467170806371,0.42366414172764,0,0.16488625294148,0,0.0603129249281559,0.119372344003136,0,0.291480836629851,0.18542530201051,0.170870880797853,0,0,0,0,0.228778173206523,0.679913719975421,0.839708713941948,0.552799895217695,0,0.158167996790568,0.203319467126849,0.324016022465404,0,0.218362563746178,0,0,0,0.259229946583586,0,1.12738587736838,0.149516546043979,0,0,0.258319646955462,0,0.117357238645754,0.2604087696879,0.104859344425711,0.241584120826006,1.44015003128933,0,0.405450430580328,0.205421914329655,0,0,0.198681354781265,0.120195449519969,0.590758108698309,0,0,0.100826185136841,0,0.0962118416403295,0,0,0.221985953374065,0.269141569828427,0.167884616364078,0.19318959403219,0.375364950902364,0.183151624267265,0.428736758158132,0,0,1.84130094602871,0.572895513439397,2.06223818812425,0,0.755393897389701,0,0,0.906284817968409,1.03552062350364,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.468207537349412,0.512201219238954,0.574354689556133,0,0.115884325944855,0,0,0,0.342869252385415,0,0.238436189947321,0,0,0.25384382367503,0.182927972872773,0,0,0.561142271657738,0,0.394017929502254,0,0.309873682371932,0.385813221962283,0.499621155875892,0.233931608445408,0.429742108096597,0.191288332068843,0,0.231867835620421
|short_description=p3@Rhbdd2
}}
}}

Latest revision as of 13:28, 25 September 2015

Short description:p3@Rhbdd2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rhbdd2_5end
Coexpression cluster:MCL_coexpression_mm9:747
Association with transcript: -9bp_to_ENSMUST00000130647_5end
EntrezGene:Rhbdd2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rhbdd2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.64
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.70
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.30
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.17
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.26
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.28
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.17
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.08
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.51
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.44
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.20
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.32
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I11.72
GP2+ M cell, pool3.CNhs13240.11847-124I20.43
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C10.25
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.41
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.59
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.73
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.78
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.44
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.88
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.19
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.42
Mouse Astrocytes, donor3.CNhs12107.11633-122C41.44
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C72.54
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.45
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E86.15
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F51.08
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F13.71
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.61
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.15
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.92
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F35.11
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D73.99
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.06
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F42.56
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.19
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I65.35
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D64.71
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.30
Mouse Schwann, donor1.CNhs12507.11728-123D91.14
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.42
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.51
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.35
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.65
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.01
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.52
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.80
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.59
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.00
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.25
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.29
cerebellum, neonate N30.CNhs11135.1395-42I21.26
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.24
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.38
corpora quadrigemina, adult.CNhs10501.16-22A40.75
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F20.26
diencephalon, adult.CNhs10482.20-12F20.83
diencephalon, neonate N30.CNhs11201.1388-42B20.65
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C60.26
eyeball, embryo E14.CNhs10521.399-16E20.00
eyeball, embryo E15.CNhs10593.426-16C90.18
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C60.34
eyeball, neonate N01.CNhs11140.1532-43E70.26
eyeball, neonate N02.CNhs11205.1551-44G80.09
eyeball, neonate N16.CNhs11188.777-19A20.26
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.28
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.18
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.15
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.33
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.84
hippocampus, neonate N00.CNhs11228.627-43G10.41
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.53
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.00
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.95
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.37
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.18
lung, embryo E12.CNhs10522.354-16G20.19
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.16
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.28
medulla oblongata, adult.CNhs10477.17-12C20.48
medulla oblongata, neonate N30.CNhs11200.1396-42A30.23
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.00
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.49
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.92
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.35
pituitary gland, embryo E16.CNhs11036.449-43F60.36
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.91
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.42
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C90.19
spleen, adult.CNhs10465.25-2G20.17
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.68
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.84
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.32
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.44
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.41
thymus, embryo E15.CNhs11005.430-45I20.21
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.12
thymus, neonate N03.CNhs11137.2104-43C70.59
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.10
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.00
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.91
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.17
whole body, embryo E14.5.CNhs10578.420-27D20.24
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.21
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.12
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.18
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.39
whole body, embryo E17.CNhs10517.475-3I50.50
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.43
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.00
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system9.55e-1975
central nervous system9.03e-1873
gray matter1.40e-1634
regional part of spinal cord6.41e-145
gray matter of spinal cord6.41e-145
regional part of nervous system1.02e-1354
ectoderm-derived structure1.38e-1395
ectoderm1.38e-1395
presumptive ectoderm1.38e-1395
spinal cord1.54e-116
dorsal region element1.54e-116
dorsum1.54e-116
neural tube5.70e-1152
neural rod5.70e-1152
future spinal cord5.70e-1152
neural keel5.70e-1152
substantia nigra1.67e-093
telencephalic nucleus1.67e-093
midbrain nucleus1.67e-093
neural nucleus1.67e-093
nucleus of brain1.67e-093
ventral horn of spinal cord7.80e-093
brain grey matter9.62e-0929
regional part of telencephalon9.62e-0929
telencephalon9.62e-0929
basal ganglion1.72e-088
nuclear complex of neuraxis1.72e-088
aggregate regional part of brain1.72e-088
collection of basal ganglia1.72e-088
cerebral subcortex1.72e-088
neurectoderm3.27e-0864
neural plate3.27e-0864
presumptive neural plate3.27e-0864
posterior neural tube1.22e-0712
chordal neural plate1.22e-0712
regional part of midbrain3.33e-074
midbrain3.33e-074
presumptive midbrain3.33e-074
midbrain neural tube3.33e-074
ecto-epithelium9.48e-0773
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