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FFCP PHASE1:Mm9::chr11:69651238..69651266,-: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=216856
|EntrezGene=216856
|HGNC=
|HGNC=
|MCL_coexpression_id=13
|TSSclassifier=NA
|UniProt=Q69ZK9
|UniProt=Q69ZK9
|association_with_transcript=19bp_to_ENSMUST00000108634,uc007jrx.1_5end
|association_with_transcript=19bp_to_ENSMUST00000108634,uc007jrx.1_5end
|cluster_id=chr11:69651238..69651266,-
|description=CAGE_peak_1_at_Nlgn2_5end
|description=CAGE_peak_1_at_Nlgn2_5end
|id=chr11:69651238..69651266,-
|id=chr11:69651238..69651266,-
|ontology_enrichment_celltype=CL:0002319!1.71e-18!43;CL:0000221!2.39e-18!44;CL:0000133!2.39e-18!44;CL:0000055!1.64e-16!50;CL:0000540!3.91e-16!33;CL:0000047!3.91e-16!33;CL:0000031!3.91e-16!33;CL:0000404!3.91e-16!33;CL:0000393!1.13e-14!39;CL:0000211!1.13e-14!39;CL:0000117!2.13e-13!23;CL:0000337!2.13e-13!23;CL:0002321!2.86e-07!70;CL:0000220!2.86e-07!70
|ontology_enrichment_celltype=CL:0002319!1.71e-18!43;CL:0000221!2.39e-18!44;CL:0000133!2.39e-18!44;CL:0000055!1.64e-16!50;CL:0000540!3.91e-16!33;CL:0000047!3.91e-16!33;CL:0000031!3.91e-16!33;CL:0000404!3.91e-16!33;CL:0000393!1.13e-14!39;CL:0000211!1.13e-14!39;CL:0000117!2.13e-13!23;CL:0000337!2.13e-13!23;CL:0002321!2.86e-07!70;CL:0000220!2.86e-07!70
|ontology_enrichment_celltype_v019_2=CL:0002319,1.69e-18,43;CL:0000221,2.37e-18,44;CL:0000133,2.37e-18,44;CL:0000540,3.87e-16,33;CL:0000047,3.87e-16,33;CL:0000031,3.87e-16,33;CL:0000404,3.87e-16,33;CL:0000393,1.12e-14,39;CL:0000211,1.12e-14,39;CL:0000117,2.12e-13,23;CL:0000337,2.12e-13,23;CL:0002321,3.08e-07,70
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!4.52e-37!73;UBERON:0005743!4.52e-37!73;UBERON:0000073!5.36e-36!75;UBERON:0001016!5.36e-36!75;UBERON:0004121!6.04e-33!102;UBERON:0000924!6.04e-33!102;UBERON:0006601!6.04e-33!102;UBERON:0002346!2.55e-27!71;UBERON:0003075!2.55e-27!71;UBERON:0007284!2.55e-27!71;UBERON:0001049!1.77e-26!52;UBERON:0005068!1.77e-26!52;UBERON:0006241!1.77e-26!52;UBERON:0007135!1.77e-26!52;UBERON:0000033!5.97e-25!63;UBERON:0000955!9.25e-25!50;UBERON:0006238!9.25e-25!50;UBERON:0002616!4.09e-24!49;UBERON:0003056!3.78e-21!49;UBERON:0002020!1.20e-19!34;UBERON:0003080!2.29e-19!40;UBERON:0002780!7.90e-19!39;UBERON:0001890!7.90e-19!39;UBERON:0006240!7.90e-19!39;UBERON:0002791!3.68e-16!29;UBERON:0003528!3.68e-16!29;UBERON:0001893!3.68e-16!29;UBERON:0000153!2.53e-13!94;UBERON:0007811!2.05e-12!86;UBERON:0000956!5.71e-12!21;UBERON:0001869!5.71e-12!21;UBERON:0000203!5.71e-12!21;UBERON:0002619!3.54e-10!17;UBERON:0003076!1.25e-07!12;UBERON:0003057!1.25e-07!12;UBERON:0002021!1.90e-07!10;UBERON:0000411!1.90e-07!10;UBERON:0001950!1.90e-07!10;UBERON:0000025!6.79e-07!114
|ontology_enrichment_uberon_v019_2=UBERON:0001017,4.42e-37,73;UBERON:0001016,5.24e-36,75;UBERON:0004121,2.93e-34,95;UBERON:0000924,2.93e-34,95;UBERON:0006601,2.93e-34,95;UBERON:0002346,2.67e-29,64;UBERON:0003075,2.67e-29,64;UBERON:0007284,2.67e-29,64;UBERON:0000073,7.45e-28,54;UBERON:0010371,2.43e-27,73;UBERON:0001049,1.74e-26,52;UBERON:0005068,1.74e-26,52;UBERON:0006241,1.74e-26,52;UBERON:0007135,1.74e-26,52;UBERON:0000955,6.25e-23,47;UBERON:0006238,6.25e-23,47;UBERON:0002616,2.69e-22,46;UBERON:0003056,3.73e-21,49;UBERON:0002020,1.19e-19,34;UBERON:0003080,2.27e-19,40;UBERON:0002780,7.81e-19,39;UBERON:0001890,7.81e-19,39;UBERON:0006240,7.81e-19,39;UBERON:0010314,2.57e-18,92;UBERON:0003528,3.64e-16,29;UBERON:0002791,3.64e-16,29;UBERON:0001893,3.64e-16,29;UBERON:0000956,5.67e-12,21;UBERON:0001869,5.67e-12,21;UBERON:0000203,5.67e-12,21;UBERON:0002619,3.52e-10,17;UBERON:0003076,1.25e-07,12;UBERON:0003057,1.25e-07,12;UBERON:0002021,1.89e-07,10;UBERON:0000411,1.89e-07,10;UBERON:0001950,1.89e-07,10;UBERON:0000025,7.13e-07,114
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8463,8.63794608547298,12.3134224627203,4.34937519160848,1.12738587736838,20.932316446157,13.8985131983962,23.9174961663179,24.023727166858,25.8502872000891,32.0385261502908,23.566993656755,14.5754488751738,6.03960302065015,6.91272015018877,2.21207784439725,17.0289180843738,12.4280258169441,7.7952493786677,9.48841487037652,7.3512101269068,3.12508168751919,3.54454865218985,3.02899349844443,2.28620419965,2.21817607301049,2.92373642219257,1.73181314952593,3.03879945672079,7.9355634265324,4.21773311410723,3.85769583420746,5.37230772365051,22.9895616898307,19.8943423978253,33.3335956166422,13.5052078819811,11.034586288778,219.123714935422,230.622943490096,198.794743163471,203.817874259613,178.121455140367,194.891625526543,158.630287554474,186.883299338052,128.692444151514,182.251629736641,23.7673025967765,49.4790843017279,40.2931309579757,52.5110508867515,30.8131349063134,41.7324764181532,37.1152035428697,40.3828712188233,31.4500825399979,36.135701282223,36.2475398843043,43.1954321774115,39.9849236896398,39.5675441862092,49.5093742397386,49.0582502021566,45.0790027925488,42.8258469429425,52.7469953028232,42.6876868389752,29.4867557051457,37.4473950996202,32.4273218328356,31.394825992583,36.7967677423943,32.2381656067287,31.0977553883713,41.3019446957413,35.5806778276158,37.5965322010685,38.4377458722324,37.1361898555874,31.9200213672358,42.2977576437687,40.896201528002,72.1952570240664,32.7504251823572,42.3295976475148,47.2482180210043,22.7209161693101,16.4626163290499
|phase1_expression=40.5176583175129,1.04692622291808,0.454999239389536,0.60492842261366,0,3.52546471014969,1.86890112476421,2.7115897922731,4.36445038670167,3.5109678948299,2.05461561870606,1.19658238493005,1.02720437958723,0.961624426608971,2.33176833270964,1.21485160433896,0.699561878128147,0.157731082679119,0,0,39.8853030808517,2.38298282882125,2.35079810225042,0.47997726838022,0.91763712426868,0.57423196411502,0.430761996159075,1.29282739611533,0.570070258369122,0.504060259519861,1.77384408524244,5.08024538767705,4.30545351309199,15.8481681015439,2.02196133825892,0.831173226792462,1.22501613757421,0,0,0,0,0.683045484958446,0,27.3196095007003,27.6759022229275,44.7854075274503,305.915015640083,36.8462514282955,63.4893068102624,61.6342780065478,67.7534280666755,60.3760770332881,0.167782606057736,0.725362142011344,1.34437519656986,15.9500850342287,20.9169411155292,13.9231464914909,186.738093373409,142.298573424177,191.417083858866,55.9093477914068,106.715375533337,13.9484456178617,5.93319817540185,12.7886420690298,129.127647633432,195.567117408671,79.9446910898363,81.0035629990144,72.3517867048754,253.943725134981,232.353705081097,97.3801853758885,89.0404425759416,113.983129539643,124.430945529309,192.041756480122,161.901286052081,173.298582077475,163.396931473904,152.627617573131,160.251041426793,127.18434986716,134.156861548039,202.704466805883,204.73047698911,173.35148461753,8.17842887998388,25.0897579554528,27.5371264266594,6.88339101585109,2.03991400112325,1.61910957491345,1.94932925234301,0.896053774194671,10.5333315098814,17.8951838706961,12.2099422163348,22.6137327686618,27.1827800168993,65.4465034813021,201.29613936825,163.545341725266,4.5463118612355,9.37431502257865,2.52762222507392,6.8510327831436,11.9111426477699,26.8680271707333,26.5432549952188,19.1813251336649,22.3697032338377,15.8258772580254,26.692636519805,14.8286577769017,9.88779870937496,9.68815691363408,4.42305275974937,19.4120219936891,11.4837589599405,13.091631834651,16.775258509631,166.299492702559,161.692857659987,5.36459815938042,5.87094110079009,2.99951365496704,4.82866862877646,138.556341449461,121.237659746936,160.334953296015,199.028846620157,183.347982905847,151.893060573038,132.875594452494,50.2068063782059,15.4264643556515,9.85618757891331,30.3036272476523,36.0433627006689,29.1975672630511,52.9382661627727,47.4720176182502,64.3625281971562,53.0390801979278,63.9982778742948,61.5714022358857,14.6586235194333,39.1449585947386,59.9993333399066,63.3475666715691,44.7656071253213,40.0489991500492,31.6904490068233,34.4329281595993,0.702213187313235,1.80143534980301,1.98914449576915,10.1491628542396,9.85009451920604,5.76198596675248,16.3353867553795,8.85439042863317,9.2560267732427,8.13868806626427,8.04820204198858,9.69152341647507,7.5697530960201,11.1633875573785,13.2952847655203,7.16379938384128,10.3188554186794,12.0785776884335,162.974710137199,114.738642802902,0.660837565967596,5.02456076660734,40.3114793511592,33.906554091624,36.3406240928303,26.2188582010345,22.237804384487,19.2127882373685,9.01605216934572,11.3642278759568,15.834118154417,18.9008648439093,15.5971269695296,5.39291645192533,7.3486936957396,6.77080329064848,25.605166628666,26.7341519506765,30.4310886317317,26.6783239477362,21.9166310499417,27.3529697572242,21.0577668623777,8.11855813887812,5.18095801876537,7.77402132707343,2.66807364378434,8.3422552858047,7.86235980452812,5.39669069723649,4.05720242777006,2.41177159752417,3.56476192493988,7.19240343627027,4.05338066937588,3.29473695825698,14.3768206527355,4.83783231969054,4.99260276983297,2.52578877947112,1.97337154874103,7.23665282045051,17.3667998756608,29.1816774126547,34.2226450528254,19.6904299499218,19.4792906079457,21.1057884376688,27.8511059836636,24.3917059822249,24.2758121923534,30.5621271715309,36.8340515598795,16.5501947862895,19.6860879327121,21.9866569043898,18.0949540727127,17.4049818821987,9.34352118736169,10.2096596132751,98.4175116625165,98.2233933642663,20.0000633359544,13.1284882146274,42.2781014017784,42.167384384037,68.5046404790301,63.8046690533314,75.3059518398492,122.855214362353,50.6013377093618,55.5286130031493,60.8743178037646,168.693691121449,29.3815976381116,55.2003371368491,57.8248705705195,48.666186276898,5.30980553359851,17.2374251670037,14.8138542912728,10.3732793865744,15.0603965369194,16.6014979889721,15.247269296925,16.3590178264877,14.6163925137736,9.16506598013866,11.5960469432499,7.21948802737308,36.0865982099015,43.2146625675145,54.8480819238879,43.7247551464448,48.0592033170561,57.6131280854688,47.8837649952172,59.6751300264615,6.33613611772018,4.02480934641258,10.5853631066382,30.8337293000568,37.621211420146,24.1854828961905,21.009532544552,20.1893306686425,9.32738677215522,116.076239058579,4.78438466233988,25.1791978915131,18.1490636822317,4.89757988212197,2.7338845544205,3.20289442489132,17.3377998593732,17.9137858974282,18.1041965683795,15.2747298882418,45.7105510724741,49.8132694460779,25.3812550931233,24.0451540416639,18.3424553546789,22.2526171534954,29.8378975168463,8.63794608547298,12.3134224627203,4.34937519160848,1.12738587736838,20.932316446157,13.8985131983962,23.9174961663179,24.023727166858,25.8502872000891,32.0385261502908,23.566993656755,14.5754488751738,6.03960302065015,6.91272015018877,2.21207784439725,17.0289180843738,12.4280258169441,7.7952493786677,9.48841487037652,7.3512101269068,3.12508168751919,3.54454865218985,3.02899349844443,2.28620419965,2.21817607301049,2.92373642219257,1.73181314952593,3.03879945672079,7.9355634265324,4.21773311410723,3.85769583420746,5.37230772365051,22.9895616898307,19.8943423978253,33.3335956166422,13.5052078819811,11.034586288778,219.123714935422,230.622943490096,198.794743163471,203.817874259613,178.121455140367,194.891625526543,158.630287554474,186.883299338052,128.692444151514,182.251629736641,23.7673025967765,49.4790843017279,40.2931309579757,52.5110508867515,30.8131349063134,41.7324764181532,37.1152035428697,40.3828712188233,31.4500825399979,36.135701282223,36.2475398843043,43.1954321774115,39.9849236896398,39.5675441862092,49.5093742397386,49.0582502021566,45.0790027925488,42.8258469429425,52.7469953028232,42.6876868389752,29.4867557051457,37.4473950996202,32.4273218328356,31.394825992583,36.7967677423943,32.2381656067287,31.0977553883713,41.3019446957413,35.5806778276158,37.5965322010685,38.4377458722324,37.1361898555874,31.9200213672358,42.2977576437687,40.896201528002,72.1952570240664,32.7504251823572,42.3295976475148,47.2482180210043,22.7209161693101,16.4626163290499
|short_description=p1@Nlgn2
|short_description=p1@Nlgn2
}}
}}

Latest revision as of 13:39, 25 September 2015

Short description:p1@Nlgn2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Nlgn2_5end
Coexpression cluster:MCL_coexpression_mm9:13
Association with transcript: 19bp_to_ENSMUST00000108634, uc007jrx.1_5end
EntrezGene:Nlgn2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Nlgn2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G740.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.05
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.45
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I73.53
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I81.87
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E74.36
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F23.51
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.05
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F11.20
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.03
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.96
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A12.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.21
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.70
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A339.89
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H22.38
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I92.35
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.48
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I10.43
GP2+ M cell, pool3.CNhs13240.11847-124I21.29
Ileum epithelium, pool1.CNhs13199.10252-104B90.57
Ileum epithelium, pool2.CNhs13232.10253-104C10.50
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C81.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G64.31
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F52.02
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D827.32
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D927.68
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B344.79
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B7305.92
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C236.85
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B863.49
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C361.63
Mouse Astrocytes, donor2.CNhs12078.11552-120C467.75
Mouse Astrocytes, donor3.CNhs12107.11633-122C460.38
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.73
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A11.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C115.95
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E120.92
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C513.92
Mouse Granule cells, donor1.CNhs12131.11713-123C3186.74
Mouse Granule cells, donor2.CNhs12357.11731-123E3142.30
Mouse Granule cells, donor3.CNhs12108.11636-122C7191.42
Mouse Meningeal cells, donor1.CNhs12132.11716-123C655.91
Mouse Meningeal cells, donor3.CNhs12109.11639-122D1106.72
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C713.95
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E75.93
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D212.79
Mouse Microglia, donor1.CNhs12629.11718-123C8129.13
Mouse Microglia, donor2.CNhs12634.11736-123E8195.57
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D579.94
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F581.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D972.35
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F1253.94
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D5232.35
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D297.38
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F289.04
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D6113.98
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D3124.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F3192.04
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D7161.90
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D4173.30
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F4163.40
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D8152.63
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E4160.25
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E5127.18
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I6134.16
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D6202.70
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F6204.73
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E1173.35
Mouse Schwann, donor1.CNhs12507.11728-123D98.18
Mouse Schwann, donor2.CNhs12573.11746-123F925.09
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G327.54
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.88
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F41.95
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.90
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.53
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I717.90
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E312.21
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I822.61
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G627.18
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H165.45
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I8201.30
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B6163.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.55
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G29.37
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G32.53
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.85
accessory axillary lymph node, adult.CNhs10475.1063-29H911.91
adrenal gland, adult.CNhs10508.49-24D726.87
adrenal gland, embryo E14.CNhs11038.406-44C526.54
adrenal gland, embryo E16.CNhs11004.1254-43D619.18
adrenal gland, embryo E17.CNhs11043.1263-45I122.37
adrenal gland, embryo E18.CNhs11026.1262-18F515.83
adrenal gland, neonate N00.CNhs11191.1311-23C126.69
adrenal gland, neonate N25.CNhs11223.1377-27I314.83
amnion, adult pregnant day17.5.CNhs10488.583-22A89.89
aorta, adult.CNhs10498.46-23H19.69
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F519.41
bone (os femoris), neonate N16.CNhs11225.1525-43A611.48
bone (os femoris), neonate N20.CNhs11195.1350-25C313.09
cecum, adult.CNhs10467.37-13H416.78
cerebellum, adult.CNhs10494.15-8B2166.30
cerebellum, neonate N30.CNhs11135.1395-42I2161.69
colon, adult.CNhs10468.36-18H75.36
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C75.87
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D13.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.83
corpora quadrigemina, adult.CNhs10501.16-22A4138.56
corpus striatum, adult.CNhs10487.19-21D8121.24
corpus striatum, neonate N00.CNhs11226.630-43F1160.33
cortex, adult.CNhs10473.12-14D5199.03
cortex, neonate N30.CNhs11107.1392-42F2183.35
diencephalon, adult.CNhs10482.20-12F2151.89
diencephalon, neonate N30.CNhs11201.1388-42B2132.88
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B150.21
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A215.43
epididymis, adult.CNhs10490.58-23B29.86
eyeball, adult.CNhs10484.31-12G430.30
eyeball, embryo E12.CNhs11016.345-16C636.04
eyeball, embryo E14.CNhs10521.399-16E229.20
eyeball, embryo E15.CNhs10593.426-16C952.94
eyeball, embryo E17.CNhs11023.1261-18D447.47
eyeball, neonate N00.CNhs11207.633-15C664.36
eyeball, neonate N01.CNhs11140.1532-43E753.04
eyeball, neonate N02.CNhs11205.1551-44G864.00
eyeball, neonate N16.CNhs11188.777-19A261.57
forelimb, embryo E11.CNhs10596.335-25E214.66
forelimb, embryo E12.CNhs10600.359-14H239.14
forelimb, embryo E13.CNhs10589.384-1E260.00
forelimb, embryo E14.CNhs10577.413-26A863.35
forelimb, embryo E15.CNhs11007.437-20E744.77
forelimb, embryo E17.CNhs10598.1517-43C440.05
forelimb, embryo E18.CNhs11008.1520-43B531.69
gonad, embryo E13.CNhs11044.1564-45I634.43
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.70
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.80
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.99
heart, embryo E11.CNhs10586.331-24E910.15
heart, embryo E12.CNhs11015.353-12F59.85
heart, embryo E13.CNhs11013.376-3I95.76
heart, embryo E14.CNhs10597.403-26D416.34
heart, embryo E15.CNhs11017.431-16C88.85
heart, embryo E16.CNhs11021.457-17C69.26
heart, embryo E17.CNhs11025.479-18E58.14
heart, embryo E18.CNhs11030.1283-20G38.05
heart, neonate N00.CNhs11213.639-21E39.69
heart, neonate N03.CNhs11221.1349-25I27.57
heart, neonate N10.CNhs11118.749-24G111.16
heart, neonate N16.CNhs11209.782-15G113.30
heart, neonate N20.CNhs11127.821-26I67.16
heart, neonate N25.CNhs11196.1351-25D310.32
heart, neonate N30.CNhs11202.1390-42D212.08
hippocampus, adult.CNhs10478.13-16E8162.97
hippocampus, neonate N00.CNhs11228.627-43G1114.74
intestinal mucosa, adult.CNhs10506.860-29I30.66
intestine, adult.CNhs10496.178-9A35.02
intestine, embryo E12.CNhs11019.1251-16I540.31
intestine, embryo E13.CNhs11010.381-16D533.91
intestine, embryo E15.CNhs10602.976-16D836.34
intestine, embryo E16.CNhs10585.463-22H426.22
intestine, embryo E17.CNhs10582.482-18D322.24
intestine, embryo E18.CNhs10526.1289-20F719.21
intestine, neonate N00.CNhs11126.644-26D19.02
intestine, neonate N01.CNhs11192.1322-23E911.36
intestine, neonate N06.CNhs11102.688-20B815.83
intestine, neonate N07.CNhs11095.720-20F218.90
intestine, neonate N10.CNhs11098.755-23A515.60
intestine, neonate N20.CNhs11187.827-18D15.39
intestine, neonate N25.CNhs11121.1352-25E37.35
intestine, neonate N30.CNhs11131.1384-42G16.77
kidney, embryo E14.CNhs10606.411-4I925.61
kidney, embryo E15.CNhs10997.434-16F826.73
kidney, embryo E16.CNhs10584.464-22A530.43
kidney, embryo E17.CNhs11028.483-18I226.68
kidney, embryo E18.CNhs11001.1288-20C721.92
kidney, neonate N00.CNhs11214.646-21G727.35
kidney, neonate N10.CNhs11206.758-6D521.06
kidney, neonate N20.CNhs11113.832-19I18.12
kidney, neonate N25.CNhs11122.1353-25F35.18
kidney, neonate N30.CNhs11203.1385-42H17.77
liver, adult pregnant day01.CNhs10466.508-5B22.67
liver, embryo E12.CNhs10601.355-15F88.34
liver, embryo E13.CNhs10524.378-3H67.86
liver, embryo E14.CNhs10594.409-16E15.40
liver, embryo E15.CNhs10520.433-16D74.06
liver, embryo E16.CNhs10523.462-17F52.41
liver, embryo E17.CNhs10510.481-18A33.56
liver, embryo E18.CNhs10579.499-43G47.19
liver, neonate N00.CNhs11117.641-24F44.05
liver, neonate N03.CNhs11123.1345-25G23.29
liver, neonate N06.CNhs11101.684-20A814.38
liver, neonate N07.CNhs11103.716-20H24.84
liver, neonate N10.CNhs11115.751-24B94.99
liver, neonate N20.CNhs11220.823-25A32.53
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D17.24
lung, adult.CNhs10474.28-22B117.37
lung, embryo E12.CNhs10522.354-16G229.18
lung, embryo E14.CNhs10604.404-26F834.22
lung, embryo E15.CNhs11020.432-17C519.69
lung, embryo E16.CNhs10998.458-17B619.48
lung, embryo E17.CNhs10605.480-44A621.11
lung, embryo E18.CNhs10583.1287-20I627.85
lung, neonate N00.CNhs11224.640-42C624.39
lung, neonate N06.CNhs11212.683-20E524.28
lung, neonate N07.CNhs11111.715-19A330.56
lung, neonate N10.CNhs11219.750-23E636.83
lung, neonate N20.CNhs11109.822-18A416.55
lung, neonate N25.CNhs11119.1359-25C719.69
lung, neonate N30.CNhs11133.1394-42H221.99
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A118.09
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A117.40
mammary gland, adult lactating day02.CNhs10480.595-22B69.34
mammary gland, adult pregnant day19.CNhs10476.588-5H210.21
medulla oblongata, adult.CNhs10477.17-12C298.42
medulla oblongata, neonate N30.CNhs11200.1396-42A398.22
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C720.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C213.13
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E142.28
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E242.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E368.50
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D763.80
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D875.31
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D9122.86
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D450.60
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D555.53
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D660.87
olfactory brain, adult.CNhs10489.18-22I9168.69
ovary, adult.CNhs10507.91-2I729.38
ovary, embryo E18.CNhs11040.505-44H755.20
ovary, neonate N00.CNhs11217.1299-22I457.82
oviduct, adult pregnant day01.CNhs10500.988-6G648.67
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F417.24
pancreas, embryo E15.CNhs11042.1556-45F214.81
pancreas, embryo E16.CNhs11003.460-26E510.37
pancreas, embryo E17.CNhs10599.1558-45G315.06
pancreas, embryo E18.CNhs10580.1535-43I716.60
pancreas, neonate N00.CNhs11105.645-26G915.25
pancreas, neonate N01.CNhs11138.1531-43D716.36
pancreas, neonate N02.CNhs11139.1539-43D814.62
pancreas, neonate N16.CNhs11136.787-43B69.17
pancreas, neonate N25.CNhs11094.1555-45E211.60
pancreas, neonate N30.CNhs11182.1548-44H57.22
pituitary gland, adult.CNhs10493.21-1G836.09
pituitary gland, embryo E12.CNhs11018.346-16E643.21
pituitary gland, embryo E13.CNhs11009.370-44C754.85
pituitary gland, embryo E14.CNhs11037.398-44A543.72
pituitary gland, embryo E15.CNhs10592.427-16B948.06
pituitary gland, embryo E16.CNhs11036.449-43F657.61
pituitary gland, embryo E17.CNhs11039.1265-44F547.88
pituitary gland, neonate N00.CNhs11190.1308-22E959.68
placenta, adult pregnant day10.CNhs10472.539-13I76.34
placenta, adult pregnant day17.CNhs10464.577-18G34.02
prostate, adult.CNhs10470.859-1F810.59
skin, adult.CNhs10492.30-1C330.83
skin, neonate N00.CNhs11124.650-25G437.62
skin, neonate N03.CNhs11215.662-22H324.19
skin, neonate N06.CNhs11097.693-20I521.01
skin, neonate N10.CNhs11108.762-6C420.19
small intestine, neonate N16.CNhs11114.790-21I19.33
spinal cord, adult.CNhs10505.24-13C9116.08
spleen, adult.CNhs10465.25-2G24.78
spleen, embryo E16.CNhs11035.461-43C125.18
spleen, embryo E18.CNhs11011.1271-21F218.15
spleen, neonate N10.CNhs11116.752-24D14.90
spleen, neonate N20.CNhs11112.824-19H12.73
spleen, neonate N25.CNhs11099.1354-25G33.20
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C617.34
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C917.91
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D318.10
stomach, adult.CNhs10503.33-1H615.27
stomach, embryo E12.CNhs10588.356-43E345.71
stomach, embryo E15.CNhs10603.1252-16G849.81
stomach, embryo E16.CNhs11022.459-17D425.38
stomach, embryo E17.CNhs11006.1035-18D524.05
stomach, embryo E18.CNhs10999.1286-20C618.34
stomach, neonate N03.CNhs11193.1340-24B822.25
stomach, neonate N07.CNhs11210.718-18A929.84
stomach, neonate N25.CNhs11104.1355-25E48.64
stomach, neonate N30.CNhs11134.1386-42I112.31
submandibular gland, adult.CNhs10469.59-29C14.35
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F520.93
testis, embryo E15.CNhs11034.443-27C513.90
testis, embryo E16.CNhs11033.470-26G523.92
testis, embryo E17.CNhs11029.486-18I524.02
testis, embryo E18.CNhs11027.503-18G525.85
testis, neonate N00.CNhs11189.1300-22B732.04
testis, neonate N07.CNhs11222.726-26I423.57
testis, neonate N10.CNhs11204.763-44D914.58
testis, neonate N20.CNhs11110.839-18H36.04
testis, neonate N30.CNhs11130.1391-42E26.91
thymus, adult.CNhs10471.38-12B52.21
thymus, embryo E14.CNhs11041.402-44I417.03
thymus, embryo E15.CNhs11005.430-45I212.43
thymus, embryo E16.CNhs11002.456-26C57.80
thymus, embryo E17.CNhs10581.478-18C19.49
thymus, embryo E18.CNhs10595.1273-19G47.35
thymus, neonate N02.CNhs11181.1541-43F83.13
thymus, neonate N03.CNhs11137.2104-43C73.54
thymus, neonate N06.CNhs11197.681-26C43.03
thymus, neonate N07.CNhs11211.713-19D32.29
thymus, neonate N10.CNhs11194.748-24E42.22
thymus, neonate N20.CNhs11186.820-7A22.92
thymus, neonate N25.CNhs11125.1362-25G71.73
thymus, neonate N30.CNhs11132.1393-42G23.04
tongue, adult.CNhs10499.32-1B47.94
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F73.86
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.37
urinary bladder, adult.CNhs10481.879-12E422.99
uterus, adult pregnant day19.CNhs10497.590-15F519.89
uterus, adult.CNhs10509.92-27E533.33
vagina, adult.CNhs10502.89-27D513.51
vesicular gland, adult.CNhs10491.51-27F811.03
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A1219.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2230.62
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3198.79
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D7203.82
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4178.12
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5194.89
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6158.63
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7186.88
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8128.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9182.25
whole body, embryo E11.CNhs11014.324-5I823.77
whole body, embryo E12.CNhs10587.857-27C949.48
whole body, embryo E13.CNhs10512.372-23H240.29
whole body, embryo E14.5.CNhs10578.420-27D252.51
whole body, embryo E14.CNhs10519.395-14B130.81
whole body, embryo E16.CNhs10514.453-14F241.73
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G537.12
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G540.38
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G531.45
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G536.14
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G536.25
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G543.20
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G539.98
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G539.57
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G549.51
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G549.06
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G545.08
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G542.83
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G552.75
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G542.69
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G529.49
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G537.45
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G532.43
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G531.39
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G536.80
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G532.24
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G531.10
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G541.30
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G535.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G537.60
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G538.44
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G537.14
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G531.92
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G542.30
whole body, embryo E17.5.CNhs10513.490-9F940.90
whole body, embryo E17.CNhs10517.475-3I572.20
whole body, embryo E18.CNhs10516.493-3B332.75
whole body, neonate N00.CNhs10525.657-19C242.33
whole body, neonate N01.CNhs10576.659-23C647.25
whole body, neonate N06.CNhs10515.692-21D122.72
whole body, neonate N10.CNhs10518.761-6B416.46





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neural cell1.69e-1843
ectodermal cell2.37e-1844
neurectodermal cell2.37e-1844
neuron3.87e-1633
neuronal stem cell3.87e-1633
neuroblast3.87e-1633
electrically signaling cell3.87e-1633
electrically responsive cell1.12e-1439
electrically active cell1.12e-1439
CNS neuron (sensu Vertebrata)2.12e-1323
neuroblast (sensu Vertebrata)2.12e-1323
embryonic cell3.08e-0770

Uber anatomy
Ontology termp-valuen
central nervous system4.42e-3773
nervous system5.24e-3675
ectoderm-derived structure2.93e-3495
ectoderm2.93e-3495
presumptive ectoderm2.93e-3495
neurectoderm2.67e-2964
neural plate2.67e-2964
presumptive neural plate2.67e-2964
regional part of nervous system7.45e-2854
ecto-epithelium2.43e-2773
neural tube1.74e-2652
neural rod1.74e-2652
future spinal cord1.74e-2652
neural keel1.74e-2652
brain6.25e-2347
future brain6.25e-2347
regional part of brain2.69e-2246
pre-chordal neural plate3.73e-2149
gray matter1.19e-1934
anterior neural tube2.27e-1940
regional part of forebrain7.81e-1939
forebrain7.81e-1939
future forebrain7.81e-1939
structure with developmental contribution from neural crest2.57e-1892
brain grey matter3.64e-1629
regional part of telencephalon3.64e-1629
telencephalon3.64e-1629
cerebral cortex5.67e-1221
cerebral hemisphere5.67e-1221
pallium5.67e-1221
regional part of cerebral cortex3.52e-1017
posterior neural tube1.25e-0712
chordal neural plate1.25e-0712
occipital lobe1.89e-0710
visual cortex1.89e-0710
neocortex1.89e-0710
tube7.13e-07114
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