FFCP PHASE1:Mm9::chr5:137443766..137443777,+: Difference between revisions
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{{FFCP|EntrezGene=60363|HGNC=|MCL_coexpression_id=395|UniProt=Q9Z0S5|association_with_transcript=27bp_to_ENSMUST00000001790,NM_021719,uc009abg.2_5end|description=CAGE_peak_6_at_Cldn15_5end|id=chr5:137443766..137443777,+|ontology_enrichment_celltype=CL:0002563!1.91e-08!9;CL:0002251!1.91e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,4.28e-18,9;CL:0002251,4.28e-18,9;CL:0000239,3.90e-12,6;CL:0000677,3.90e-12,6;CL:0000584,3.90e-12,6;CL:0000075,2.78e-10,7;CL:0002076,4.53e-10,15;CL:0000066,9.69e-10,25;CL:0002250,1.51e-07,3;CL:0000223,4.41e-07,20;CL:0000682,6.50e-07,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!1.37e-18!43;UBERON:0005409!2.94e-17!59;UBERON:0000344!1.27e-13!15;UBERON:0001242!6.33e-12!13;UBERON:0000060!6.33e-12!13;UBERON:0001262!6.33e-12!13;UBERON:0004786!6.33e-12!13;UBERON:0003350!1.91e-08!9;UBERON:0004808!1.91e-08!9;UBERON:0001277!1.91e-08!9;UBERON:0004923!4.71e-08!24|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.73e-47,31;UBERON:0005409,6.81e-33,47;UBERON:0000344,1.43e-30,15;UBERON:0001242,1.81e-26,13;UBERON:0001262,1.81e-26,13;UBERON:0004786,1.81e-26,13;UBERON:0004923,8.57e-20,24;UBERON:0003350,4.28e-18,9;UBERON:0004808,4.28e-18,9;UBERON:0001277,4.28e-18,9;UBERON:0000485,1.92e-14,11;UBERON:0001007,8.70e-11,116;UBERON:0001555,8.70e-11,116;UBERON:0007026,8.70e-11,116;UBERON:0004119,1.80e-10,118;UBERON:0000925,1.80e-10,118;UBERON:0006595,1.80e-10,118;UBERON:0002108,1.88e-09,4;UBERON:0004921,4.28e-09,114;UBERON:0000331,7.25e-08,3;UBERON:0002116,7.25e-08,3;UBERON:0001204,7.25e-08,3;UBERON:0001168,7.25e-08,3|phase1_expression=0,17.4487703819681,13.1949779422965,23.8946726932396,16.0286633582831,17.9630820945722,19.1562365288331,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,24.3188482645978,27.2997044469932,13.2073351746455,18.5227658348402,20.6852383378453,32.8740515659527,36.54436881519,31.0422714917427,0,0,0,26.5743490171173,31.9170519088305,20.2127662699745,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.194429899074283,0,0,0,0,0,2.82985379639542,3.15186783932632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,3.88225191044804,0,0.742210695324124,0.173485326766136,0.304465478312141,0,0.301445281105245,0.352766121407114,0.879666139307728,0,1.87979163995885,0,0.323533699894818,0,0,16.775258509631,0,0,20.6920214718959,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,1.23413690309903,0.465067889500816,0,0.583826711835847,0.329119699826961,0.32833492815819,0.486412857275134,0.877199924551994,1.09775057645525,1.74468344388483,0,0,26.10308385572,19.8337924997658,0.213288250535234,0.464473343720877,0.38660238396628,1.81515172161008,1.55664630691409,2.66315876557583,17.5575752771469,3.45867804920423,5.02670417600539,3.38226002469956,6.23885078781184,16.178749355776,18.5878722892237,25.0918004300503,0.189667900953082,0,0,0.610953983535943,0.387904974335251,0.350679099451593,0.316182685621286,0.738050739898011,0.470996183524124,1.1105744752962,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0,0,0,0,0.482443521363367,0.923765950833023,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0.780534591431195,0.157635144106191,0.44292937929755,0,0.81931657357869,0.518054945597687,0.867894351489069,0,0,1.47529281905711,1.65562047782839,0,0,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0.584511715822624,0,0,0.709700426041343,0.35613120733451,0.977321756121456,0.659880491890142,0,0,0,0.565815239267694,0.590603785761546,0.307435147943927,0.775284879504663,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0,0,0.484393280087717,0.603129249281559,0.477489376012546,0.328281799490123,12.8251568117134,0,0,1.23832120777933,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.540026704109006,0.418176592028937,0.218362563746178,0.134864346384821,0.330613822901344,0.523511883968059,12.5726524093039,0,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0.772758376128762,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0,0.666740183404846,0.618105171716683,0,1.51618327058278,1.01391719956096,0,0.0936415074698824,0.448176066834085,0.229741875822453,0,0.811190281613988,0.192909220463705,0.824171801606613,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.338458431566706,0.182927972872773,0,0,0.561142271657738,0.355905054372522,0.0985044823755635,0,0.464810523557898,0.578719832943424,0,0.467863216890817,0.644613162144895,0.191288332068843,0.441182838239031,0.231867835620421|short_description=p6@Cldn15}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=60363 | |||
|HGNC= | |||
|MCL_coexpression_id=395 | |||
|TSSclassifier=NA | |||
|UniProt=Q9Z0S5 | |||
|association_with_transcript=27bp_to_ENSMUST00000001790,NM_021719,uc009abg.2_5end | |||
|cluster_id=chr5:137443766..137443777,+ | |||
|description=CAGE_peak_6_at_Cldn15_5end | |||
|id=chr5:137443766..137443777,+ | |||
|ontology_enrichment_celltype=CL:0002563!1.91e-08!9;CL:0002251!1.91e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.28e-18,9;CL:0002251,4.28e-18,9;CL:0000239,3.90e-12,6;CL:0000677,3.90e-12,6;CL:0000584,3.90e-12,6;CL:0000075,2.78e-10,7;CL:0002076,4.53e-10,15;CL:0000066,9.69e-10,25;CL:0002250,1.51e-07,3;CL:0000223,4.41e-07,20;CL:0000682,6.50e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!1.37e-18!43;UBERON:0005409!2.94e-17!59;UBERON:0000344!1.27e-13!15;UBERON:0001242!6.33e-12!13;UBERON:0000060!6.33e-12!13;UBERON:0001262!6.33e-12!13;UBERON:0004786!6.33e-12!13;UBERON:0003350!1.91e-08!9;UBERON:0004808!1.91e-08!9;UBERON:0001277!1.91e-08!9;UBERON:0004923!4.71e-08!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,6.73e-47,31;UBERON:0005409,6.81e-33,47;UBERON:0000344,1.43e-30,15;UBERON:0001242,1.81e-26,13;UBERON:0001262,1.81e-26,13;UBERON:0004786,1.81e-26,13;UBERON:0004923,8.57e-20,24;UBERON:0003350,4.28e-18,9;UBERON:0004808,4.28e-18,9;UBERON:0001277,4.28e-18,9;UBERON:0000485,1.92e-14,11;UBERON:0001007,8.70e-11,116;UBERON:0001555,8.70e-11,116;UBERON:0007026,8.70e-11,116;UBERON:0004119,1.80e-10,118;UBERON:0000925,1.80e-10,118;UBERON:0006595,1.80e-10,118;UBERON:0002108,1.88e-09,4;UBERON:0004921,4.28e-09,114;UBERON:0000331,7.25e-08,3;UBERON:0002116,7.25e-08,3;UBERON:0001204,7.25e-08,3;UBERON:0001168,7.25e-08,3 | |||
|phase1_expression=0,17.4487703819681,13.1949779422965,23.8946726932396,16.0286633582831,17.9630820945722,19.1562365288331,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,24.3188482645978,27.2997044469932,13.2073351746455,18.5227658348402,20.6852383378453,32.8740515659527,36.54436881519,31.0422714917427,0,0,0,26.5743490171173,31.9170519088305,20.2127662699745,0,0,0,0,0,0,0,0,0,0,0,0.439372365468944,0.194429899074283,0,0,0,0,0,2.82985379639542,3.15186783932632,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,3.88225191044804,0,0.742210695324124,0.173485326766136,0.304465478312141,0,0.301445281105245,0.352766121407114,0.879666139307728,0,1.87979163995885,0,0.323533699894818,0,0,16.775258509631,0,0,20.6920214718959,0,0,0,0,0,0,0,0,0,0,0.712875546952214,0.870848794270651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0.234526059981096,0,0,0.196764231747404,1.23413690309903,0.465067889500816,0,0.583826711835847,0.329119699826961,0.32833492815819,0.486412857275134,0.877199924551994,1.09775057645525,1.74468344388483,0,0,26.10308385572,19.8337924997658,0.213288250535234,0.464473343720877,0.38660238396628,1.81515172161008,1.55664630691409,2.66315876557583,17.5575752771469,3.45867804920423,5.02670417600539,3.38226002469956,6.23885078781184,16.178749355776,18.5878722892237,25.0918004300503,0.189667900953082,0,0,0.610953983535943,0.387904974335251,0.350679099451593,0.316182685621286,0.738050739898011,0.470996183524124,1.1105744752962,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.324270453550071,0,0,0,0,0,0,0.482443521363367,0.923765950833023,0,0.162964976442026,0,0.234690248288502,0,0.238043640886014,0.780534591431195,0.157635144106191,0.44292937929755,0,0.81931657357869,0.518054945597687,0.867894351489069,0,0,1.47529281905711,1.65562047782839,0,0,0,0.504941854408746,0,0.390438744296638,0,0,0,0,0,0.584511715822624,0,0,0.709700426041343,0.35613120733451,0.977321756121456,0.659880491890142,0,0,0,0.565815239267694,0.590603785761546,0.307435147943927,0.775284879504663,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0,0,0,0.484393280087717,0.603129249281559,0.477489376012546,0.328281799490123,12.8251568117134,0,0,1.23832120777933,0,0,0,0,0,0,0,0,0.316335993581135,0.203319467126849,0.540026704109006,0.418176592028937,0.218362563746178,0.134864346384821,0.330613822901344,0.523511883968059,12.5726524093039,0,0,0.149516546043979,0.165458490457098,0,0,0,0.117357238645754,0,0,0.241584120826006,0,0.316011120628178,0,0,0,0,0,0,0,0.100966449948148,0,0,0.0974578807397524,0,0,0,0,0,0,0.772758376128762,0.375364950902364,0.36630324853453,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0,0.666740183404846,0.618105171716683,0,1.51618327058278,1.01391719956096,0,0.0936415074698824,0.448176066834085,0.229741875822453,0,0.811190281613988,0.192909220463705,0.824171801606613,0.147198920134397,0,0.177475806159338,0,0.145346416632329,0.282328141245992,0.338458431566706,0.182927972872773,0,0,0.561142271657738,0.355905054372522,0.0985044823755635,0,0.464810523557898,0.578719832943424,0,0.467863216890817,0.644613162144895,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p6@Cldn15 | |||
}} |
Latest revision as of 14:16, 25 September 2015
Short description: | p6@Cldn15 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Cldn15_5end |
Coexpression cluster: | MCL_coexpression_mm9:395 |
Association with transcript: | 27bp_to_ENSMUST00000001790, NM_021719, uc009abg.2_5end |
EntrezGene: | Cldn15 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.28e-18 | 9 |
epithelial cell of alimentary canal | 4.28e-18 | 9 |
brush border epithelial cell | 3.90e-12 | 6 |
gut absorptive cell | 3.90e-12 | 6 |
enterocyte | 3.90e-12 | 6 |
columnar/cuboidal epithelial cell | 2.78e-10 | 7 |
endo-epithelial cell | 4.53e-10 | 15 |
epithelial cell | 9.69e-10 | 25 |
intestinal crypt stem cell | 1.51e-07 | 3 |
endodermal cell | 4.41e-07 | 20 |
M cell of gut | 6.50e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
intestine | 6.73e-47 | 31 |
gastrointestinal system | 6.81e-33 | 47 |
mucosa | 1.43e-30 | 15 |
intestinal mucosa | 1.81e-26 | 13 |
wall of intestine | 1.81e-26 | 13 |
gastrointestinal system mucosa | 1.81e-26 | 13 |
organ component layer | 8.57e-20 | 24 |
epithelium of mucosa | 4.28e-18 | 9 |
gastrointestinal system epithelium | 4.28e-18 | 9 |
intestinal epithelium | 4.28e-18 | 9 |
simple columnar epithelium | 1.92e-14 | 11 |
digestive system | 8.70e-11 | 116 |
digestive tract | 8.70e-11 | 116 |
primitive gut | 8.70e-11 | 116 |
endoderm-derived structure | 1.80e-10 | 118 |
endoderm | 1.80e-10 | 118 |
presumptive endoderm | 1.80e-10 | 118 |
small intestine | 1.88e-09 | 4 |
subdivision of digestive tract | 4.28e-09 | 114 |
ileal mucosa | 7.25e-08 | 3 |
ileum | 7.25e-08 | 3 |
mucosa of small intestine | 7.25e-08 | 3 |
wall of small intestine | 7.25e-08 | 3 |