FFCP PHASE1:Mm9::chr3:60332169..60332178,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=56758 | |EntrezGene=56758 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1 | |MCL_coexpression_id=1 | ||
|TSSclassifier=NA | |||
|UniProt=Q9JKP5 | |UniProt=Q9JKP5 | ||
|association_with_transcript=-499bp_to_uc008pjg.1,uc008pjh.1_5end | |association_with_transcript=-499bp_to_uc008pjg.1,uc008pjh.1_5end | ||
|cluster_id=chr3:60332169..60332178,+ | |||
|description=CAGE_peak_20_at_Mbnl1_5end | |description=CAGE_peak_20_at_Mbnl1_5end | ||
|id=chr3:60332169..60332178,+ | |id=chr3:60332169..60332178,+ | ||
|ontology_enrichment_celltype=CL:0000540!1.72e-07!33;CL:0000047!1.72e-07!33;CL:0000031!1.72e-07!33;CL:0000404!1.72e-07!33;CL:0000393!9.47e-07!39;CL:0000211!9.47e-07!39 | |ontology_enrichment_celltype=CL:0000540!1.72e-07!33;CL:0000047!1.72e-07!33;CL:0000031!1.72e-07!33;CL:0000404!1.72e-07!33;CL:0000393!9.47e-07!39;CL:0000211!9.47e-07!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,3.47e-08,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!2.19e-17!102;UBERON:0000924!2.19e-17!102;UBERON:0006601!2.19e-17!102;UBERON:0000073!6.35e-17!75;UBERON:0001016!6.35e-17!75;UBERON:0001017!4.14e-16!73;UBERON:0005743!4.14e-16!73;UBERON:0000033!2.06e-14!63;UBERON:0002346!1.86e-13!71;UBERON:0003075!1.86e-13!71;UBERON:0007284!1.86e-13!71;UBERON:0000955!2.28e-12!50;UBERON:0006238!2.28e-12!50;UBERON:0001049!2.71e-12!52;UBERON:0005068!2.71e-12!52;UBERON:0006241!2.71e-12!52;UBERON:0007135!2.71e-12!52;UBERON:0002616!8.92e-12!49;UBERON:0003056!1.70e-09!49;UBERON:0003080!3.51e-09!40;UBERON:0002780!1.14e-08!39;UBERON:0001890!1.14e-08!39;UBERON:0006240!1.14e-08!39;UBERON:0002020!1.16e-08!34;UBERON:0000153!2.76e-08!94;UBERON:0007811!5.30e-08!86;UBERON:0002791!3.39e-07!29;UBERON:0003528!3.39e-07!29;UBERON:0001893!3.39e-07!29 | |ontology_enrichment_uberon=UBERON:0004121!2.19e-17!102;UBERON:0000924!2.19e-17!102;UBERON:0006601!2.19e-17!102;UBERON:0000073!6.35e-17!75;UBERON:0001016!6.35e-17!75;UBERON:0001017!4.14e-16!73;UBERON:0005743!4.14e-16!73;UBERON:0000033!2.06e-14!63;UBERON:0002346!1.86e-13!71;UBERON:0003075!1.86e-13!71;UBERON:0007284!1.86e-13!71;UBERON:0000955!2.28e-12!50;UBERON:0006238!2.28e-12!50;UBERON:0001049!2.71e-12!52;UBERON:0005068!2.71e-12!52;UBERON:0006241!2.71e-12!52;UBERON:0007135!2.71e-12!52;UBERON:0002616!8.92e-12!49;UBERON:0003056!1.70e-09!49;UBERON:0003080!3.51e-09!40;UBERON:0002780!1.14e-08!39;UBERON:0001890!1.14e-08!39;UBERON:0006240!1.14e-08!39;UBERON:0002020!1.16e-08!34;UBERON:0000153!2.76e-08!94;UBERON:0007811!5.30e-08!86;UBERON:0002791!3.39e-07!29;UBERON:0003528!3.39e-07!29;UBERON:0001893!3.39e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,3.13e-20,54;UBERON:0001017,2.48e-18,73;UBERON:0001016,1.11e-17,75;UBERON:0000955,1.38e-17,47;UBERON:0006238,1.38e-17,47;UBERON:0001049,2.21e-17,52;UBERON:0005068,2.21e-17,52;UBERON:0006241,2.21e-17,52;UBERON:0007135,2.21e-17,52;UBERON:0002616,4.74e-16,46;UBERON:0004121,3.73e-15,95;UBERON:0000924,3.73e-15,95;UBERON:0006601,3.73e-15,95;UBERON:0010371,1.81e-13,73;UBERON:0002346,3.47e-13,64;UBERON:0003075,3.47e-13,64;UBERON:0007284,3.47e-13,64;UBERON:0010314,7.14e-13,92;UBERON:0003528,2.55e-12,29;UBERON:0002791,2.55e-12,29;UBERON:0001893,2.55e-12,29;UBERON:0002020,7.28e-12,34;UBERON:0002021,1.41e-11,10;UBERON:0000411,1.41e-11,10;UBERON:0001950,1.41e-11,10;UBERON:0003080,3.34e-11,40;UBERON:0002619,1.10e-10,17;UBERON:0000956,1.87e-10,21;UBERON:0001869,1.87e-10,21;UBERON:0000203,1.87e-10,21;UBERON:0002780,5.60e-10,39;UBERON:0001890,5.60e-10,39;UBERON:0006240,5.60e-10,39;UBERON:0004111,3.78e-09,122;UBERON:0003056,1.59e-08,49;UBERON:0004684,3.47e-08,3;UBERON:0002275,3.47e-08,3;UBERON:0000025,1.63e-07,114;UBERON:0003076,2.04e-07,12;UBERON:0003057,2.04e-07,12;UBERON:0004733,3.58e-07,6;UBERON:0004732,3.58e-07,6;UBERON:0002028,3.58e-07,6;UBERON:0007277,3.58e-07,6 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0.16787927191189,0,0,0,0,0.513653904676515,0.159544317990673,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.608261587317087,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0.85960031981627,0,0.404632921719196,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0.311068836925433,0.270011876663381,0.210324961351382,0.571301968807607,0.662605622854841,0.61245399607477,0,0,2.20231761998777,1.14918604276669,1.99688493233117,0.527545150920775,0.548925861614458,1.56274011167028,2.51264699101243,0.56276261003168,1.5279824777681,0.589257170947335,1.85083185038834,0.372798891650601,0.681535739998656,0.68014404096107,0,0,0,0,0,0,0.561777680527007,0.170430322578058,0.259786004602869,0.35333957451034,1.12674735821344,1.28326477414318,0,0,0,0,0,0.34255163915718,0.517875767294343,0.742210695324124,0.346970653532272,0.304465478312141,0.230615497256059,0,0.23517741427141,0.376999773989026,0,0,0,0.485300549842228,0.220841518460394,0,0,1.46390398505774,1.8850203613211,0,0,0,0,1.49790639404823,0.915001205637253,0.251308704225729,2.43354048269187,1.02286182932132,2.0778804455956,0.973447578406546,0.407357455401265,0.373220911830279,0,0.631325567659422,0.130120442962704,0,0.720248519221397,0.753524089178575,0.544291993210623,0.384341160854549,0.937017245597288,0,0,0.189106080167819,0,0.43839146485515,0.556094498451196,1.39300866608867,0.411564272815887,0.199034266818493,0,0,0,0.621377317606506,0,0.36012412292203,0.473489471170421,0.983821158737019,1.23413690309903,1.16266972375204,1.07309360559848,0,0.658239399653922,0.164167464079095,0.405344047729279,0.146199987425332,0.219550115291051,0.536825675041487,2.73376933133365,1.64647379806855,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.571242563048644,2.25415471346161,0.814605311381257,0.387904974335251,0.280543279561274,0.632365371242573,0.442830443938806,0.941992367048249,0.863780147452604,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0.312037673114561,0,0.358794827043824,0.482443521363367,0,0.189491411770485,0.488894929326078,0.169745085775188,0.704070744865506,0,0,0,0,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.275936746304732,3.05046120976805,1.87538698547525,0,0.252470927204373,0.631016438832513,0.780877488593277,0.646270193198397,0.238968797952552,0.445597348164788,0.849229592366497,0.404810701674894,0.584511715822624,0.790575555893047,1.92792789853084,0.283880170416537,0.534196811001766,0.488660878060728,0.164970122972535,0,0.485561272309963,0.302323556964751,0.565815239267694,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0,0.532020700926821,0.713475270408282,0.493647061806363,0.608929898229199,0.23467170806371,0,0.220528398054962,0.16488625294148,0,0.301564624640779,0.238744688006273,0.328281799490123,0,3.52308073819968,0,0.206386867963223,0.185194527369712,0.376736914009382,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0.269728692769641,0.165306911450672,0,0.129614973291793,1.24267862617385,0,1.04661582230785,0.330916980914195,0.388902376688095,0.516639293910924,0.337912250981556,0.234714477291508,0.911430693907651,0.419437377702843,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0.179026695667481,0,0.240390899039938,0,0.302899349844443,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0.453460767230423,0,0.0897138566094757,0,0.19318959403219,0.375364950902364,0.36630324853453,0.428736758158132,0,1.12950368523413,2.30162618253588,1.71868654031819,3.78077001156113,0.685082519770642,1.5107877947794,1.35004500046361,0.45032120322422,1.81256963593682,0.51776031175182,0.207574695168353,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0,0.206035057238894,1.28367683836726,0.758091635291392,0.760437899670719,0.565879024158229,0.842773567228942,0.384150914429216,0.976402972245426,0.476293691283074,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0.726732083161643,0.564656282491984,0.592302255241736,0.365855945745545,0.526139422875686,0.407412341537585,0,0.474540072496697,0.591026894253381,0,0.464810523557898,0.385813221962283,0.999242311751784,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0.231867835620421 | |phase1_expression=1.28119077683835,0,0,0,0,0.16787927191189,0,0,0,0,0.513653904676515,0.159544317990673,0,0,0,0,0,0,0,0,0.680346321208558,0,0,0,0,0,0,0,0.190023419456374,0.252030129759931,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0.629484089877886,0.608261587317087,0,0,0,0,0,0.279972843250725,0,0,0,0,0,0.85960031981627,0,0.404632921719196,0.528990979272033,0,0.338844532069132,0,0,0,0,0,0.384218305321555,0.311068836925433,0.270011876663381,0.210324961351382,0.571301968807607,0.662605622854841,0.61245399607477,0,0,2.20231761998777,1.14918604276669,1.99688493233117,0.527545150920775,0.548925861614458,1.56274011167028,2.51264699101243,0.56276261003168,1.5279824777681,0.589257170947335,1.85083185038834,0.372798891650601,0.681535739998656,0.68014404096107,0,0,0,0,0,0,0.561777680527007,0.170430322578058,0.259786004602869,0.35333957451034,1.12674735821344,1.28326477414318,0,0,0,0,0,0.34255163915718,0.517875767294343,0.742210695324124,0.346970653532272,0.304465478312141,0.230615497256059,0,0.23517741427141,0.376999773989026,0,0,0,0.485300549842228,0.220841518460394,0,0,1.46390398505774,1.8850203613211,0,0,0,0,1.49790639404823,0.915001205637253,0.251308704225729,2.43354048269187,1.02286182932132,2.0778804455956,0.973447578406546,0.407357455401265,0.373220911830279,0,0.631325567659422,0.130120442962704,0,0.720248519221397,0.753524089178575,0.544291993210623,0.384341160854549,0.937017245597288,0,0,0.189106080167819,0,0.43839146485515,0.556094498451196,1.39300866608867,0.411564272815887,0.199034266818493,0,0,0,0.621377317606506,0,0.36012412292203,0.473489471170421,0.983821158737019,1.23413690309903,1.16266972375204,1.07309360559848,0,0.658239399653922,0.164167464079095,0.405344047729279,0.146199987425332,0.219550115291051,0.536825675041487,2.73376933133365,1.64647379806855,0,0,0.426576501070468,0,0.128867461322093,0.201683524623343,0,0,0,0.164698954724011,0.251335208800269,0.198956472041151,0.19496408711912,0,0,0,0.189667900953082,0.571242563048644,2.25415471346161,0.814605311381257,0.387904974335251,0.280543279561274,0.632365371242573,0.442830443938806,0.941992367048249,0.863780147452604,0,0.333690211432188,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0.312037673114561,0,0.358794827043824,0.482443521363367,0,0.189491411770485,0.488894929326078,0.169745085775188,0.704070744865506,0,0,0,0,0.221464689648775,0.318909537314974,0.163863314715738,0.172684981865896,0.144649058581512,0,0,0.491764273019036,0.275936746304732,3.05046120976805,1.87538698547525,0,0.252470927204373,0.631016438832513,0.780877488593277,0.646270193198397,0.238968797952552,0.445597348164788,0.849229592366497,0.404810701674894,0.584511715822624,0.790575555893047,1.92792789853084,0.283880170416537,0.534196811001766,0.488660878060728,0.164970122972535,0,0.485561272309963,0.302323556964751,0.565815239267694,0,0.307435147943927,0.258428293168221,0.363533729477506,0,0.316036757935816,0,0,0.680879211507576,0.36012218806262,0.129358683782755,0,0.532020700926821,0.713475270408282,0.493647061806363,0.608929898229199,0.23467170806371,0,0.220528398054962,0.16488625294148,0,0.301564624640779,0.238744688006273,0.328281799490123,0,3.52308073819968,0,0.206386867963223,0.185194527369712,0.376736914009382,0,0,0,0,0,0,0,0.406638934253697,0.108005340821801,0.209088296014469,0,0.269728692769641,0.165306911450672,0,0.129614973291793,1.24267862617385,0,1.04661582230785,0.330916980914195,0.388902376688095,0.516639293910924,0.337912250981556,0.234714477291508,0.911430693907651,0.419437377702843,0.241584120826006,0,0,0.202725215290164,0.102710957164827,0.25984164595559,0.179026695667481,0,0.240390899039938,0,0.302899349844443,0.0762068066549998,0.100826185136841,0,0.0962118416403295,0,0.453460767230423,0,0.0897138566094757,0,0.19318959403219,0.375364950902364,0.36630324853453,0.428736758158132,0,1.12950368523413,2.30162618253588,1.71868654031819,3.78077001156113,0.685082519770642,1.5107877947794,1.35004500046361,0.45032120322422,1.81256963593682,0.51776031175182,0.207574695168353,0,0.341467211508268,0,0.209613162627982,0.183843508450014,0,0.206035057238894,1.28367683836726,0.758091635291392,0.760437899670719,0.565879024158229,0.842773567228942,0.384150914429216,0.976402972245426,0.476293691283074,0.115884325944855,0.192909220463705,0,0.147198920134397,0.342869252385415,0.354951612318675,0.476872379894642,0.726732083161643,0.564656282491984,0.592302255241736,0.365855945745545,0.526139422875686,0.407412341537585,0,0.474540072496697,0.591026894253381,0,0.464810523557898,0.385813221962283,0.999242311751784,0.233931608445408,0.429742108096597,0.191288332068843,0.661774257358546,0.231867835620421 | ||
|short_description=p20@Mbnl1 | |short_description=p20@Mbnl1 | ||
}} | }} |
Latest revision as of 15:23, 25 September 2015
Short description: | p20@Mbnl1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_20_at_Mbnl1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -499bp_to_uc008pjg.1, uc008pjh.1_5end |
EntrezGene: | Mbnl1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 3.47e-08 | 3 |