FFCP PHASE1:Mm9::chr11:72363757..72363766,-: Difference between revisions
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{{FFCP|EntrezGene=77577|HGNC=|MCL_coexpression_id=1986|UniProt=Q9D232|association_with_transcript=-9bp_to_NM_029932,uc007jzb.1,uc011xyk.1_5end|description=CAGE_peak_4_at_Spns3_5end|id=chr11:72363757..72363766,-|ontology_enrichment_celltype=CL:0000988!8.83e-08!32;CL:0002032!8.83e-08!32;CL:0000037!8.83e-08!32;CL:0000566!8.83e-08!32;CL:0000837!8.83e-08!32;CL:0000049!2.33e-07!19|ontology_enrichment_celltype_v019_2=CL:0000049,9.93e-12,19;CL:0000988,1.25e-11,32;CL:0002032,1.25e-11,32;CL:0000037,1.25e-11,32;CL:0000837,1.25e-11,32;CL:0002320,2.41e-07,46;CL:0000134,2.41e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002193!5.86e-21!48;UBERON:0002390!1.74e-18!45;UBERON:0003061!1.74e-18!45;UBERON:0002405!2.25e-17!70;UBERON:0004177!2.93e-15!29;UBERON:0005057!2.80e-11!51;UBERON:0003081!3.48e-10!88;UBERON:0002370!3.55e-10!23;UBERON:0000974!3.55e-10!23;UBERON:0004807!3.55e-10!23;UBERON:0005058!3.55e-10!23;UBERON:0003351!3.55e-10!23;UBERON:0009113!3.55e-10!23;UBERON:0003295!3.55e-10!23;UBERON:0009722!3.55e-10!23;UBERON:0005562!3.55e-10!23;UBERON:0007690!3.55e-10!23;UBERON:0006562!1.43e-09!24;UBERON:0003408!1.43e-09!24;UBERON:0001557!1.43e-09!24;UBERON:0001042!1.43e-09!24;UBERON:0008814!1.43e-09!24;UBERON:0009145!1.43e-09!24;UBERON:0000072!4.89e-08!27;UBERON:0002106!6.49e-07!6;UBERON:0004457!6.49e-07!6;UBERON:0000042!6.49e-07!6;UBERON:0004854!6.49e-07!6;UBERON:0009034!6.49e-07!6;UBERON:0002095!6.49e-07!6;UBERON:0004782!6.49e-07!6;UBERON:0003281!6.49e-07!6;UBERON:0009664!6.49e-07!6;UBERON:0002296!6.49e-07!6;UBERON:0005602!6.49e-07!6;UBERON:0001179!6.49e-07!6;UBERON:0006293!6.49e-07!6|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.23e-18,48;UBERON:0002405,6.23e-18,48;UBERON:0002390,2.53e-17,45;UBERON:0003061,2.53e-17,45;UBERON:0002370,5.62e-13,23;UBERON:0000974,5.62e-13,23;UBERON:0004807,5.62e-13,23;UBERON:0005058,5.62e-13,23;UBERON:0003351,5.62e-13,23;UBERON:0009113,5.62e-13,23;UBERON:0003295,5.62e-13,23;UBERON:0009722,5.62e-13,23;UBERON:0005562,5.62e-13,23;UBERON:0007690,5.62e-13,23;UBERON:0006562,2.38e-12,24;UBERON:0003408,2.38e-12,24;UBERON:0001557,2.38e-12,24;UBERON:0001042,2.38e-12,24;UBERON:0008814,2.38e-12,24;UBERON:0009145,2.38e-12,24;UBERON:0004177,1.01e-11,29;UBERON:0005057,1.01e-11,29;UBERON:0000072,9.56e-11,27;UBERON:0000077,2.57e-09,35;UBERON:0003081,4.13e-08,87;UBERON:0007811,1.51e-07,36;UBERON:0002384,2.41e-07,46|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0.809901069559304,0.699561878128147,3.3123527362615,1.91960207048034,2.54633791078818,0.0850432901510698,2.38298282882125,2.61199789138935,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,2.09409497589519,1.17646297606203,0,0.971020706062307,0,0,0,0,0,0,0,0,0,2.51673909086605,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0.883366073841574,0.969750506270444,0,0,0,0,1.67741174308288,2.39961092397363,2.28726408731516,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0,0,2.80885274925294,1.28673953557358,2.55747149456033,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0.224862112384854,0.405720242777006,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318909537314974,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0,1.02522528478712,0.412773735926445,0.185194527369712,0.376736914009382,0.956859594047176,0.457556346413045,2.71965487990169,2.09927178485487,1.24379976423981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.405450430580328,1.02710957164827,1.03936658382236,0.895133478337407,1.39076948346885,1.44234539423963,1.18151621739662,1.41353029927407,2.66723823292499,1.10908803650525,1.46186821109629,1.6356013078856,3.27255326108393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421|short_description=p4@Spns3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=77577 | |||
|HGNC= | |||
|MCL_coexpression_id=1986 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D232 | |||
|association_with_transcript=-9bp_to_NM_029932,uc007jzb.1,uc011xyk.1_5end | |||
|cluster_id=chr11:72363757..72363766,- | |||
|description=CAGE_peak_4_at_Spns3_5end | |||
|id=chr11:72363757..72363766,- | |||
|ontology_enrichment_celltype=CL:0000988!8.83e-08!32;CL:0002032!8.83e-08!32;CL:0000037!8.83e-08!32;CL:0000566!8.83e-08!32;CL:0000837!8.83e-08!32;CL:0000049!2.33e-07!19 | |||
|ontology_enrichment_celltype_v019_2=CL:0000049,9.93e-12,19;CL:0000988,1.25e-11,32;CL:0002032,1.25e-11,32;CL:0000037,1.25e-11,32;CL:0000837,1.25e-11,32;CL:0002320,2.41e-07,46;CL:0000134,2.41e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!5.86e-21!48;UBERON:0002390!1.74e-18!45;UBERON:0003061!1.74e-18!45;UBERON:0002405!2.25e-17!70;UBERON:0004177!2.93e-15!29;UBERON:0005057!2.80e-11!51;UBERON:0003081!3.48e-10!88;UBERON:0002370!3.55e-10!23;UBERON:0000974!3.55e-10!23;UBERON:0004807!3.55e-10!23;UBERON:0005058!3.55e-10!23;UBERON:0003351!3.55e-10!23;UBERON:0009113!3.55e-10!23;UBERON:0003295!3.55e-10!23;UBERON:0009722!3.55e-10!23;UBERON:0005562!3.55e-10!23;UBERON:0007690!3.55e-10!23;UBERON:0006562!1.43e-09!24;UBERON:0003408!1.43e-09!24;UBERON:0001557!1.43e-09!24;UBERON:0001042!1.43e-09!24;UBERON:0008814!1.43e-09!24;UBERON:0009145!1.43e-09!24;UBERON:0000072!4.89e-08!27;UBERON:0002106!6.49e-07!6;UBERON:0004457!6.49e-07!6;UBERON:0000042!6.49e-07!6;UBERON:0004854!6.49e-07!6;UBERON:0009034!6.49e-07!6;UBERON:0002095!6.49e-07!6;UBERON:0004782!6.49e-07!6;UBERON:0003281!6.49e-07!6;UBERON:0009664!6.49e-07!6;UBERON:0002296!6.49e-07!6;UBERON:0005602!6.49e-07!6;UBERON:0001179!6.49e-07!6;UBERON:0006293!6.49e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.23e-18,48;UBERON:0002405,6.23e-18,48;UBERON:0002390,2.53e-17,45;UBERON:0003061,2.53e-17,45;UBERON:0002370,5.62e-13,23;UBERON:0000974,5.62e-13,23;UBERON:0004807,5.62e-13,23;UBERON:0005058,5.62e-13,23;UBERON:0003351,5.62e-13,23;UBERON:0009113,5.62e-13,23;UBERON:0003295,5.62e-13,23;UBERON:0009722,5.62e-13,23;UBERON:0005562,5.62e-13,23;UBERON:0007690,5.62e-13,23;UBERON:0006562,2.38e-12,24;UBERON:0003408,2.38e-12,24;UBERON:0001557,2.38e-12,24;UBERON:0001042,2.38e-12,24;UBERON:0008814,2.38e-12,24;UBERON:0009145,2.38e-12,24;UBERON:0004177,1.01e-11,29;UBERON:0005057,1.01e-11,29;UBERON:0000072,9.56e-11,27;UBERON:0000077,2.57e-09,35;UBERON:0003081,4.13e-08,87;UBERON:0007811,1.51e-07,36;UBERON:0002384,2.41e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,0,0.809901069559304,0.699561878128147,3.3123527362615,1.91960207048034,2.54633791078818,0.0850432901510698,2.38298282882125,2.61199789138935,0.159992422793407,0.22940928106717,0,0,0,0,0,0,0,0,0,0,0,0,0.837063261473815,0,2.09409497589519,1.17646297606203,0,0.971020706062307,0,0,0,0,0,0,0,0,0,2.51673909086605,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.11418387971906,1.03575153458869,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0.883366073841574,0.969750506270444,0,0,0,0,1.67741174308288,2.39961092397363,2.28726408731516,0,0,0,0,0,0,0,0,1.11966273549084,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0.278047249225598,0,0,0,2.80885274925294,1.28673953557358,2.55747149456033,0,0,0.180062061461015,0,0,0,0,0,0,0,0,0,0,0,0.134206418760372,0,0,0,0,0,0,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0,0,0,0,0.224862112384854,0.405720242777006,0,0,0,0.162135226775035,0.274561413188081,0,0.372140947668503,0.312037673114561,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318909537314974,0,0.172684981865896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0.291480836629851,0,1.02522528478712,0.412773735926445,0.185194527369712,0.376736914009382,0.956859594047176,0.457556346413045,2.71965487990169,2.09927178485487,1.24379976423981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.948033361884535,0.405450430580328,1.02710957164827,1.03936658382236,0.895133478337407,1.39076948346885,1.44234539423963,1.18151621739662,1.41353029927407,2.66723823292499,1.10908803650525,1.46186821109629,1.6356013078856,3.27255326108393,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170733605754134,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0.214871054048298,0,0,0.231867835620421 | |||
|short_description=p4@Spns3 | |||
}} |
Latest revision as of 15:35, 25 September 2015
Short description: | p4@Spns3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Spns3_5end |
Coexpression cluster: | MCL_coexpression_mm9:1986 |
Association with transcript: | -9bp_to_NM_029932, uc007jzb.1, uc011xyk.1_5end |
EntrezGene: | Spns3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
common myeloid progenitor | 9.93e-12 | 19 |
hematopoietic cell | 1.25e-11 | 32 |
hematopoietic oligopotent progenitor cell | 1.25e-11 | 32 |
hematopoietic stem cell | 1.25e-11 | 32 |
hematopoietic multipotent progenitor cell | 1.25e-11 | 32 |
connective tissue cell | 2.41e-07 | 46 |
mesenchymal cell | 2.41e-07 | 46 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.23e-18 | 48 |
immune system | 6.23e-18 | 48 |
hematopoietic system | 2.53e-17 | 45 |
blood island | 2.53e-17 | 45 |
thymus | 5.62e-13 | 23 |
neck | 5.62e-13 | 23 |
respiratory system epithelium | 5.62e-13 | 23 |
hemolymphoid system gland | 5.62e-13 | 23 |
pharyngeal epithelium | 5.62e-13 | 23 |
thymic region | 5.62e-13 | 23 |
pharyngeal gland | 5.62e-13 | 23 |
entire pharyngeal arch endoderm | 5.62e-13 | 23 |
thymus primordium | 5.62e-13 | 23 |
early pharyngeal endoderm | 5.62e-13 | 23 |
pharynx | 2.38e-12 | 24 |
gland of gut | 2.38e-12 | 24 |
upper respiratory tract | 2.38e-12 | 24 |
chordate pharynx | 2.38e-12 | 24 |
pharyngeal arch system | 2.38e-12 | 24 |
pharyngeal region of foregut | 2.38e-12 | 24 |
hemopoietic organ | 1.01e-11 | 29 |
immune organ | 1.01e-11 | 29 |
segment of respiratory tract | 9.56e-11 | 27 |
mixed endoderm/mesoderm-derived structure | 2.57e-09 | 35 |
lateral plate mesoderm | 4.13e-08 | 87 |
craniocervical region | 1.51e-07 | 36 |
connective tissue | 2.41e-07 | 46 |