FFCP PHASE1:Mm9::chr5:139853670..139853699,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=80290,320197 | |EntrezGene=80290,320197 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=480 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENSMUST00000137254,uc012efy.1_5end | |association_with_transcript=0bp_to_ENSMUST00000137254,uc012efy.1_5end | ||
|cluster_id=chr5:139853670..139853699,+ | |||
|description=CAGE_peak_1_at_D830046C22Rik_5end,CAGE_peak_3_at_Gpr146_5end | |description=CAGE_peak_1_at_D830046C22Rik_5end,CAGE_peak_3_at_Gpr146_5end | ||
|id=chr5:139853670..139853699,+ | |id=chr5:139853670..139853699,+ | ||
|ontology_enrichment_celltype=CL:0000988!3.84e-08!32;CL:0002032!3.84e-08!32;CL:0000037!3.84e-08!32;CL:0000566!3.84e-08!32;CL:0000837!3.84e-08!32;CL:0002031!6.51e-08!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000084,1.24e-12,11;CL:0000827,1.24e-12,11;CL:0000838,2.06e-11,12;CL:0000542,2.22e-10,13;CL:0000051,2.22e-10,13;CL:0002031,2.88e-10,25;CL:0000791,1.36e-09,9;CL:0000789,1.36e-09,9;CL:0002420,1.36e-09,9;CL:0002419,1.36e-09,9;CL:0000790,1.36e-09,9;CL:0000738,3.39e-09,17;CL:0002087,3.39e-09,17;CL:0002320,4.51e-09,46;CL:0000134,4.51e-09,46;CL:0000988,1.62e-08,32;CL:0002032,1.62e-08,32;CL:0000037,1.62e-08,32;CL:0000837,1.62e-08,32;CL:0000624,2.33e-08,8;CL:0000764,3.41e-07,3;CL:0000765,3.41e-07,3;CL:0000038,3.41e-07,3;CL:0000547,3.41e-07,3;CL:0000219,4.68e-07,54 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:2531,3.41e-07,3;DOID:0060083,3.41e-07,3;DOID:1240,3.41e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0003081!9.14e-10!88;UBERON:0002405!1.61e-08!70;UBERON:0002390!4.09e-08!45;UBERON:0003061!4.09e-08!45;UBERON:0000926!2.25e-07!193;UBERON:0004120!2.25e-07!193;UBERON:0006603!2.25e-07!193;UBERON:0002193!2.67e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.51e-09,46;UBERON:0003081,1.77e-08,87;UBERON:0001048,1.67e-07,134;UBERON:0003914,7.96e-07,47;UBERON:0007100,9.74e-07,18;UBERON:0000948,9.74e-07,18;UBERON:0005498,9.74e-07,18;UBERON:0004140,9.74e-07,18;UBERON:0009881,9.74e-07,18;UBERON:0004141,9.74e-07,18;UBERON:0003084,9.74e-07,18;UBERON:0007005,9.74e-07,18;UBERON:0004139,9.74e-07,18;UBERON:0004291,9.74e-07,18 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,1.80772652818207,1.40788722151667,2.57470978954193,0,0.319088635981346,2.9104124088305,2.36035086531293,0.999329285446988,0.404950534779652,0.699561878128147,0,0.137114433605739,0,0.425216450755349,1.78723712161594,2.08959831311148,0,0,0,0,0,0,0,0,8.25539875497521,3.07532393792285,15.8481681015439,0,0,0,0,1.5626706890476,0,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0.439372365468944,0,0,0,0,6.5282592781021,1.34437519656986,0,0,0,0,0,0,0,0,2.2497492932035,1.97773272513395,1.4209602298922,0.599200221036809,0.768436610643109,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,6.08715426273523,0.860423876981386,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0.247194967734374,0,3.5384422077995,0.323533699894818,1.10420759230197,0,0,0,0,0,0.838705871541442,0,0.762421362438388,0,0.457500602818626,0,0.347648640384553,0,0.20778804455956,0,0.101839363850316,0.995255764880744,0.252722758433675,0,0.260240885925407,0,0.180062129805349,0,0,0,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0.696504333044333,0,0,1.40442637462647,0.772043721344145,0,0,0,0.36012412292203,0.473489471170421,0.196764231747404,0.925602677324269,1.86027155800326,1.3413670069981,1.63471479314037,1.48103864922132,1.64167464079095,2.59420190546738,5.4093995347373,1.97595103761946,1.8788898626452,0,0,0,0,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0.379335801906163,0,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0.442830443938806,0.627994911365499,0.123397163921801,0,1.00107063429656,1.57247196090562,0.899448449539415,1.62288097110802,1.20588579876208,1.01850340712568,2.01387296215567,0.972811360650212,0.549122826376163,1.43768206527355,0.372140947668503,0,0,0,0,1.47802552133284,0.189491411770485,0.162964976442026,0.509235257325564,0.704070744865506,1.17254380209271,0.238043640886014,0.390267295715598,0.630540576424764,0.8858587585951,1.2756381492599,1.80249646187312,1.03610989119537,1.15719246865209,1.50791283939272,0.54390568381871,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0.809621403349789,0,0,0,0,0.35613120733451,0,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.540183282093931,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0,0,0.42366414172764,0.220528398054962,0,0.161464426695906,0.180938774784468,0,0,0,0.18542530201051,1.53783792718067,0.412773735926445,0.370389054739423,2.82552685507037,0.546776910884101,1.14389086603261,1.01987057996313,1.25956307091292,0.829199842826543,0,0.158167996790568,0.203319467126849,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0.405450430580328,0.205421914329655,0,0,0.198681354781265,1.20195449519969,0.590758108698309,0.403865799792591,0.228620419965,0.806609481094724,0.974578807397524,2.02044867444692,1.28564592399726,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0.952587382566147,0,0.38581844092741,1.64834360321323,0.588795680537589,0,0,0.715308569841963,0.290692833264657,0.188218760830661,0.0846146078916765,0,0.263069711437843,1.08643291076689,0.561142271657738,0.355905054372522,0.197008964751127,0,0.309873682371932,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0.882365676478062,0.695603506861264 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,1.80772652818207,1.40788722151667,2.57470978954193,0,0.319088635981346,2.9104124088305,2.36035086531293,0.999329285446988,0.404950534779652,0.699561878128147,0,0.137114433605739,0,0.425216450755349,1.78723712161594,2.08959831311148,0,0,0,0,0,0,0,0,8.25539875497521,3.07532393792285,15.8481681015439,0,0,0,0,1.5626706890476,0,0.588231488031014,0.683045484958446,0,0,0,0,0,0,0.439372365468944,0,0,0,0,6.5282592781021,1.34437519656986,0,0,0,0,0,0,0,0,2.2497492932035,1.97773272513395,1.4209602298922,0.599200221036809,0.768436610643109,0.103689612308478,0.135005938331691,0,0,0,0.122490799214954,0,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0.0755715601067855,6.08715426273523,0.860423876981386,0,0,0,0,0.702222100658759,0,0,0,0.14084341977668,0,0,0,0,0,0,0.11418387971906,0.258937883647172,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.150722640552623,0.117588707135705,0.251333182659351,0.247194967734374,0,3.5384422077995,0.323533699894818,1.10420759230197,0,0,0,0,0,0.838705871541442,0,0.762421362438388,0,0.457500602818626,0,0.347648640384553,0,0.20778804455956,0,0.101839363850316,0.995255764880744,0.252722758433675,0,0.260240885925407,0,0.180062129805349,0,0,0,0,0,0.215567992932842,0.189106080167819,0.175951124163949,0.219195732427575,0,0.696504333044333,0,0,1.40442637462647,0.772043721344145,0,0,0,0.36012412292203,0.473489471170421,0.196764231747404,0.925602677324269,1.86027155800326,1.3413670069981,1.63471479314037,1.48103864922132,1.64167464079095,2.59420190546738,5.4093995347373,1.97595103761946,1.8788898626452,0,0,0,0,0.213288250535234,0,0,0,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0,0,0,0.199141273254367,0.379335801906163,0,0,0.203651327845314,0,0.0701358198903186,0.189709611372772,0.442830443938806,0.627994911365499,0.123397163921801,0,1.00107063429656,1.57247196090562,0.899448449539415,1.62288097110802,1.20588579876208,1.01850340712568,2.01387296215567,0.972811360650212,0.549122826376163,1.43768206527355,0.372140947668503,0,0,0,0,1.47802552133284,0.189491411770485,0.162964976442026,0.509235257325564,0.704070744865506,1.17254380209271,0.238043640886014,0.390267295715598,0.630540576424764,0.8858587585951,1.2756381492599,1.80249646187312,1.03610989119537,1.15719246865209,1.50791283939272,0.54390568381871,0,0,0,0.117211686592203,0,0,0,0,0.215423397732799,0.238968797952552,0,0.283076530788832,0.809621403349789,0,0,0,0,0.35613120733451,0,0.494910368917606,0,0.242780636154981,0,0,0,0,0,0,0,0.316036757935816,0,0,0.680879211507576,0.540183282093931,0.129358683782755,0,0.177340233642274,0,0.164549020602121,0,0,0.42366414172764,0.220528398054962,0,0.161464426695906,0.180938774784468,0,0,0,0.18542530201051,1.53783792718067,0.412773735926445,0.370389054739423,2.82552685507037,0.546776910884101,1.14389086603261,1.01987057996313,1.25956307091292,0.829199842826543,0,0.158167996790568,0.203319467126849,0,0,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0.165458490457098,0,0,0,0.117357238645754,0,0,0,0,0.316011120628178,0.405450430580328,0.205421914329655,0,0,0.198681354781265,1.20195449519969,0.590758108698309,0.403865799792591,0.228620419965,0.806609481094724,0.974578807397524,2.02044867444692,1.28564592399726,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,0,0,0,0.171853182343688,0,0,0,0,0,0,0.207574695168353,0.399024873401031,0.512200817262403,0.243106717068294,0.209613162627982,0.183843508450014,0.222246727801615,0,0.320919209591815,0.252697211763798,0.50695859978048,0.188626341386076,0.280924522409647,0.256100609619477,0.287177344778066,0.952587382566147,0,0.38581844092741,1.64834360321323,0.588795680537589,0,0,0.715308569841963,0.290692833264657,0.188218760830661,0.0846146078916765,0,0.263069711437843,1.08643291076689,0.561142271657738,0.355905054372522,0.197008964751127,0,0.309873682371932,0,0.249810577937946,0.467863216890817,0.214871054048298,0,0.882365676478062,0.695603506861264 | ||
|short_description=p1@D830046C22Rik,p3@Gpr146 | |short_description=p1@D830046C22Rik,p3@Gpr146 | ||
}} | }} |
Latest revision as of 15:50, 25 September 2015
Short description: | p1@D830046C22Rik, p3@Gpr146 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_D830046C22Rik_5end, CAGE_peak_3_at_Gpr146_5end |
Coexpression cluster: | MCL_coexpression_mm9:480 |
Association with transcript: | 0bp_to_ENSMUST00000137254, uc012efy.1_5end |
EntrezGene: | 80290,320197 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
T cell | 1.24e-12 | 11 |
pro-T cell | 1.24e-12 | 11 |
lymphoid lineage restricted progenitor cell | 2.06e-11 | 12 |
lymphocyte | 2.22e-10 | 13 |
common lymphoid progenitor | 2.22e-10 | 13 |
hematopoietic lineage restricted progenitor cell | 2.88e-10 | 25 |
mature alpha-beta T cell | 1.36e-09 | 9 |
alpha-beta T cell | 1.36e-09 | 9 |
immature T cell | 1.36e-09 | 9 |
mature T cell | 1.36e-09 | 9 |
immature alpha-beta T cell | 1.36e-09 | 9 |
leukocyte | 3.39e-09 | 17 |
nongranular leukocyte | 3.39e-09 | 17 |
connective tissue cell | 4.51e-09 | 46 |
mesenchymal cell | 4.51e-09 | 46 |
hematopoietic cell | 1.62e-08 | 32 |
hematopoietic oligopotent progenitor cell | 1.62e-08 | 32 |
hematopoietic stem cell | 1.62e-08 | 32 |
hematopoietic multipotent progenitor cell | 1.62e-08 | 32 |
CD4-positive, alpha-beta T cell | 2.33e-08 | 8 |
erythroid lineage cell | 3.41e-07 | 3 |
erythroblast | 3.41e-07 | 3 |
erythroid progenitor cell | 3.41e-07 | 3 |
proerythroblast | 3.41e-07 | 3 |
motile cell | 4.68e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.51e-09 | 46 |
lateral plate mesoderm | 1.77e-08 | 87 |
primordium | 1.67e-07 | 134 |
epithelial tube | 7.96e-07 | 47 |
primary circulatory organ | 9.74e-07 | 18 |
heart | 9.74e-07 | 18 |
primitive heart tube | 9.74e-07 | 18 |
primary heart field | 9.74e-07 | 18 |
anterior lateral plate mesoderm | 9.74e-07 | 18 |
heart tube | 9.74e-07 | 18 |
heart primordium | 9.74e-07 | 18 |
cardiac mesoderm | 9.74e-07 | 18 |
cardiogenic plate | 9.74e-07 | 18 |
heart rudiment | 9.74e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 3.41e-07 | 3 |
immune system cancer | 3.41e-07 | 3 |
leukemia | 3.41e-07 | 3 |