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FFCP PHASE1:Mm9::chr7:112703013..112703028,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=20597
|EntrezGene=20597
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q04519,Q3UEE0
|UniProt=Q04519,Q3UEE0
|association_with_transcript=139bp_to_ENSMUST00000046983,NM_011421,uc009iyf.2,uc009iyg.2_5end
|association_with_transcript=139bp_to_ENSMUST00000046983,NM_011421,uc009iyf.2,uc009iyg.2_5end
|cluster_id=chr7:112703013..112703028,+
|description=CAGE_peak_2_at_Smpd1_5end
|description=CAGE_peak_2_at_Smpd1_5end
|id=chr7:112703013..112703028,+
|id=chr7:112703013..112703028,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0002453,6.30e-07,8
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000025!1.34e-15!114;UBERON:0004111!8.51e-15!122;UBERON:0004121!1.53e-14!102;UBERON:0000924!1.53e-14!102;UBERON:0006601!1.53e-14!102;UBERON:0001017!6.97e-13!73;UBERON:0005743!6.97e-13!73;UBERON:0000073!1.41e-12!75;UBERON:0001016!1.41e-12!75;UBERON:0000033!1.80e-12!63;UBERON:0002346!3.07e-12!71;UBERON:0003075!3.07e-12!71;UBERON:0007284!3.07e-12!71;UBERON:0001049!4.63e-11!52;UBERON:0005068!4.63e-11!52;UBERON:0006241!4.63e-11!52;UBERON:0007135!4.63e-11!52;UBERON:0000955!9.80e-10!50;UBERON:0006238!9.80e-10!50;UBERON:0002616!1.44e-09!49;UBERON:0004872!9.17e-09!33;UBERON:0004535!2.24e-08!23;UBERON:0001009!2.24e-08!23;UBERON:0003056!2.65e-08!49;UBERON:0007100!1.34e-07!18;UBERON:0000948!1.34e-07!18;UBERON:0005498!1.34e-07!18;UBERON:0004140!1.34e-07!18;UBERON:0009881!1.34e-07!18;UBERON:0004141!1.34e-07!18;UBERON:0003084!1.34e-07!18;UBERON:0007005!1.34e-07!18;UBERON:0004139!1.34e-07!18;UBERON:0004291!1.34e-07!18;UBERON:0003103!2.07e-07!43;UBERON:0003076!4.28e-07!12;UBERON:0003057!4.28e-07!12;UBERON:0003914!8.41e-07!47
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.66e-21,92;UBERON:0004121,8.83e-17,95;UBERON:0000924,8.83e-17,95;UBERON:0006601,8.83e-17,95;UBERON:0002346,1.61e-16,64;UBERON:0003075,1.61e-16,64;UBERON:0007284,1.61e-16,64;UBERON:0000025,3.25e-16,114;UBERON:0010371,2.16e-15,73;UBERON:0004111,2.80e-15,122;UBERON:0001017,7.99e-15,73;UBERON:0000073,2.22e-14,54;UBERON:0001016,4.85e-14,75;UBERON:0001049,9.44e-14,52;UBERON:0005068,9.44e-14,52;UBERON:0006241,9.44e-14,52;UBERON:0007135,9.44e-14,52;UBERON:0003076,2.65e-10,12;UBERON:0003057,2.65e-10,12;UBERON:0002616,2.92e-10,46;UBERON:0000483,4.78e-10,174;UBERON:0000955,7.56e-10,47;UBERON:0006238,7.56e-10,47;UBERON:0000119,1.07e-09,176;UBERON:0003103,1.14e-09,43;UBERON:0003056,2.00e-09,49;UBERON:0004535,2.84e-08,23;UBERON:0001009,2.84e-08,23;UBERON:0007100,7.53e-08,18;UBERON:0000948,7.53e-08,18;UBERON:0005498,7.53e-08,18;UBERON:0004140,7.53e-08,18;UBERON:0009881,7.53e-08,18;UBERON:0004141,7.53e-08,18;UBERON:0003084,7.53e-08,18;UBERON:0007005,7.53e-08,18;UBERON:0004139,7.53e-08,18;UBERON:0004291,7.53e-08,18;UBERON:0002021,1.51e-07,10;UBERON:0000411,1.51e-07,10;UBERON:0001950,1.51e-07,10;UBERON:0002020,6.56e-07,34
|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,0.666219523631325,0.809901069559304,0,0.315462165358238,0,0,1.19060606211498,0.297872853602656,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0,0,0,0.523523743973798,0,0,0,1.6366586336825,1.21652317463417,0.550640256485045,4.69434806608824,1.96222640742402,3.51497892375155,4.27745777963423,0.699932108126813,2.87505128729943,0,0,0.336093799142464,0.257259436035947,0.85960031981627,2.06268836910977,1.21389876515759,2.64495489636016,1.90149421051854,0.338844532069132,0,0,1.97773272513395,0.7104801149461,3.59520132622086,4.99483796918021,0.311068836925433,0.135005938331691,0.210324961351382,2.57085885963423,2.20868540951614,0.367472397644862,0.0958454710182364,0,1.10115880999389,1.27687338085188,1.53606533256243,0.659431438650969,0.823388792421687,0.52091337055676,1.3959149950069,3.93933827022176,0.916789486660861,1.76777151284201,1.28134512719193,1.1183966749518,0.37863096666592,0.453429360640713,0.579728977403356,0,0.679971333707751,1.07940638327563,0.649776417447669,0,0.702222100658759,1.1930122580464,0,1.06001872353102,1.12674735821344,0,0,0,0,0,0,0.91347103775248,0.258937883647172,0.445326417194474,0.693941307064543,0.304465478312141,0.691846491768175,0.301445281105245,0.470354828542819,0.502666365318702,0.494389935468748,1.87979163995885,2.65383165584962,0.647067399789637,0.883366073841574,0,0,3.80615036115011,1.46612694769419,0,0,0,0.127070227073065,2.54644086988199,0,0.376963056338593,2.43354048269187,1.27857728665165,2.28566849015516,1.29793010454206,0.407357455401265,1.11966273549084,0.505445516867349,1.26265113531884,1.43132487258974,1.14951052216736,1.0803727788321,0.60281927134286,1.15662048557257,1.2811372028485,1.49922759295566,1.55222022443409,0.215567992932842,0,0,1.31517439456545,0,0,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0.621377317606506,1.40715635988658,0.720248245844059,0.946978942340841,1.18058539048442,1.54267112887378,2.79040733700489,3.75582761959467,3.15266424391358,2.30383789878873,4.10418660197738,6.08016071593918,6.28659945928929,5.48875288227627,8.32079796314305,1.26173969138476,0.720332286654991,0,0,0,0,0.128867461322093,0.605050573870028,0.22237804384487,0.380451252225118,0,0.494096864172033,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.228497025219458,2.25415471346161,0.610953983535943,1.16371492300575,0.631222379012867,1.20149420536089,1.47610147979602,1.41298855057237,3.33172342588861,0,1.00107063429656,0.982794975566015,2.47348323623339,1.82574109249653,0.964708639009667,1.52775511068852,0.863088412352432,0.324270453550071,0.274561413188081,1.43768206527355,1.11642284300551,1.24815069245824,0.252578877947112,0.179397413521912,0,0.369506380333209,0.568474235311454,0.325929952884052,0,0,0,0.476087281772027,1.17080188714679,0.630540576424764,0.44292937929755,0.318909537314974,0.327726629431476,1.20879487306127,0.578596234326046,0,0.54390568381871,0,0,2.24770825982909,2.81308047821288,0.655739781506702,1.00988370881749,0.315508219416257,1.17131623288992,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0.963963949265421,0.283880170416537,0.534196811001766,0.651547837414304,0.164970122972535,0,0.242780636154981,0.604647113929502,0.377210159511796,0.590603785761546,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,2.7235168460303,0.900305470156551,0.388076051348264,0,0.709360934569094,1.24858172321449,1.15184314421485,3.04464949114599,7.50949465803873,1.48282449604674,0.441056796109924,0.65954501176592,0.322928853391811,0.542816324353403,1.55184047204077,1.47726809770555,0,3.15223013417866,0.854354403989263,0.412773735926445,0.740778109478847,0.565105371014073,0.683471138605126,0.457556346413045,0.169978429993855,0.69975726161829,0.138199973804424,0,0.316335993581135,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0.539457385539283,0.41326727862668,0.26175594198403,0,0.621339313086926,0,0,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.352071715937262,0,0.104859344425711,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0.240390899039938,0.147689527174577,0,0,0,0.0974578807397524,0,0,1.36038230169127,0.665957860122194,0,0.335769232728157,0,0.375364950902364,0.73260649706906,0.428736758158132,0,1.12950368523413,1.84130094602871,4.58316410751517,2.06223818812425,1.37016503954128,1.5107877947794,2.02506750069542,1.35096360967266,2.71885445390523,1.03552062350364,0.103787347584177,0.798049746802062,0.341467211508268,0.972426868273176,0.838452650511929,0.367687016900028,0.44449345560323,0.618105171716683,0.962757628775446,1.51618327058278,1.52087579934144,0.943131706930381,0.468207537349412,0.768301828858431,0.689225627467359,0.476293691283074,0.463537303779422,0.192909220463705,1.23625770240992,1.03039244094078,1.028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|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,0.666219523631325,0.809901069559304,0,0.315462165358238,0,0,1.19060606211498,0.297872853602656,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0,0,0,0.523523743973798,0,0,0,1.6366586336825,1.21652317463417,0.550640256485045,4.69434806608824,1.96222640742402,3.51497892375155,4.27745777963423,0.699932108126813,2.87505128729943,0,0,0.336093799142464,0.257259436035947,0.85960031981627,2.06268836910977,1.21389876515759,2.64495489636016,1.90149421051854,0.338844532069132,0,0,1.97773272513395,0.7104801149461,3.59520132622086,4.99483796918021,0.311068836925433,0.135005938331691,0.210324961351382,2.57085885963423,2.20868540951614,0.367472397644862,0.0958454710182364,0,1.10115880999389,1.27687338085188,1.53606533256243,0.659431438650969,0.823388792421687,0.52091337055676,1.3959149950069,3.93933827022176,0.916789486660861,1.76777151284201,1.28134512719193,1.1183966749518,0.37863096666592,0.453429360640713,0.579728977403356,0,0.679971333707751,1.07940638327563,0.649776417447669,0,0.702222100658759,1.1930122580464,0,1.06001872353102,1.12674735821344,0,0,0,0,0,0,0.91347103775248,0.258937883647172,0.445326417194474,0.693941307064543,0.304465478312141,0.691846491768175,0.301445281105245,0.470354828542819,0.502666365318702,0.494389935468748,1.87979163995885,2.65383165584962,0.647067399789637,0.883366073841574,0,0,3.80615036115011,1.46612694769419,0,0,0,0.127070227073065,2.54644086988199,0,0.376963056338593,2.43354048269187,1.27857728665165,2.28566849015516,1.29793010454206,0.407357455401265,1.11966273549084,0.505445516867349,1.26265113531884,1.43132487258974,1.14951052216736,1.0803727788321,0.60281927134286,1.15662048557257,1.2811372028485,1.49922759295566,1.55222022443409,0.215567992932842,0,0,1.31517439456545,0,0,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0.621377317606506,1.40715635988658,0.720248245844059,0.946978942340841,1.18058539048442,1.54267112887378,2.79040733700489,3.75582761959467,3.15266424391358,2.30383789878873,4.10418660197738,6.08016071593918,6.28659945928929,5.48875288227627,8.32079796314305,1.26173969138476,0.720332286654991,0,0,0,0,0.128867461322093,0.605050573870028,0.22237804384487,0.380451252225118,0,0.494096864172033,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.189667900953082,0.228497025219458,2.25415471346161,0.610953983535943,1.16371492300575,0.631222379012867,1.20149420536089,1.47610147979602,1.41298855057237,3.33172342588861,0,1.00107063429656,0.982794975566015,2.47348323623339,1.82574109249653,0.964708639009667,1.52775511068852,0.863088412352432,0.324270453550071,0.274561413188081,1.43768206527355,1.11642284300551,1.24815069245824,0.252578877947112,0.179397413521912,0,0.369506380333209,0.568474235311454,0.325929952884052,0,0,0,0.476087281772027,1.17080188714679,0.630540576424764,0.44292937929755,0.318909537314974,0.327726629431476,1.20879487306127,0.578596234326046,0,0.54390568381871,0,0,2.24770825982909,2.81308047821288,0.655739781506702,1.00988370881749,0.315508219416257,1.17131623288992,0.215423397732799,0.238968797952552,0.222798674082394,0.283076530788832,0.404810701674894,0.584511715822624,0.395287777946524,0.963963949265421,0.283880170416537,0.534196811001766,0.651547837414304,0.164970122972535,0,0.242780636154981,0.604647113929502,0.377210159511796,0.590603785761546,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,1.05418608574999,0,2.7235168460303,0.900305470156551,0.388076051348264,0,0.709360934569094,1.24858172321449,1.15184314421485,3.04464949114599,7.50949465803873,1.48282449604674,0.441056796109924,0.65954501176592,0.322928853391811,0.542816324353403,1.55184047204077,1.47726809770555,0,3.15223013417866,0.854354403989263,0.412773735926445,0.740778109478847,0.565105371014073,0.683471138605126,0.457556346413045,0.169978429993855,0.69975726161829,0.138199973804424,0,0.316335993581135,0.203319467126849,0.108005340821801,0.418176592028937,0.218362563746178,0.539457385539283,0.41326727862668,0.26175594198403,0,0.621339313086926,0,0,0.330916980914195,0.583353565032143,0.387479470433193,0.337912250981556,0.352071715937262,0,0.104859344425711,0.241584120826006,0,0,0,0.102710957164827,0,0,0,0.240390899039938,0.147689527174577,0,0,0,0.0974578807397524,0,0,1.36038230169127,0.665957860122194,0,0.335769232728157,0,0.375364950902364,0.73260649706906,0.428736758158132,0,1.12950368523413,1.84130094602871,4.58316410751517,2.06223818812425,1.37016503954128,1.5107877947794,2.02506750069542,1.35096360967266,2.71885445390523,1.03552062350364,0.103787347584177,0.798049746802062,0.341467211508268,0.972426868273176,0.838452650511929,0.367687016900028,0.44449345560323,0.618105171716683,0.962757628775446,1.51618327058278,1.52087579934144,0.943131706930381,0.468207537349412,0.768301828858431,0.689225627467359,0.476293691283074,0.463537303779422,0.192909220463705,1.23625770240992,1.03039244094078,1.028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|short_description=p2@Smpd1
|short_description=p2@Smpd1
}}
}}

Latest revision as of 16:28, 25 September 2015

Short description:p2@Smpd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Smpd1_5end
Coexpression cluster:NA
Association with transcript: 139bp_to_ENSMUST00000046983, NM_011421, uc009iyf.2, uc009iyg.2_5end
EntrezGene:Smpd1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Smpd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.34
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.09
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.81
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.32
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.30
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.64
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.29
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D81.64
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D91.22
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.55
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B74.69
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.96
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B83.51
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C34.28
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.70
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.34
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.26
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C52.06
Mouse Granule cells, donor1.CNhs12131.11713-123C31.21
Mouse Granule cells, donor2.CNhs12357.11731-123E32.64
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.34
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C83.60
Mouse Microglia, donor2.CNhs12634.11736-123E84.99
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.21
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.28
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.54
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.82
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E41.40
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E53.94
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I60.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D61.77
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E11.12
Mouse Schwann, donor1.CNhs12507.11728-123D90.38
Mouse Schwann, donor2.CNhs12573.11746-123F90.45
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.58
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.08
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I71.19
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I81.06
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.13
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.91
accessory axillary lymph node, adult.CNhs10475.1063-29H90.26
adrenal gland, adult.CNhs10508.49-24D70.45
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.69
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.50
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H11.88
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F50.65
bone (os femoris), neonate N16.CNhs11225.1525-43A60.88
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.81
cerebellum, neonate N30.CNhs11135.1395-42I21.47
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A42.55
corpus striatum, adult.CNhs10487.19-21D80.00
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D52.43
cortex, neonate N30.CNhs11107.1392-42F21.28
diencephalon, adult.CNhs10482.20-12F22.29
diencephalon, neonate N30.CNhs11201.1388-42B21.30
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A21.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.08
eyeball, embryo E17.CNhs11023.1261-18D40.60
eyeball, neonate N00.CNhs11207.633-15C61.16
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G81.50
eyeball, neonate N16.CNhs11188.777-19A21.55
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.41
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.62
heart, embryo E12.CNhs11015.353-12F51.41
heart, embryo E13.CNhs11013.376-3I90.72
heart, embryo E14.CNhs10597.403-26D40.95
heart, embryo E15.CNhs11017.431-16C81.18
heart, embryo E16.CNhs11021.457-17C61.54
heart, embryo E17.CNhs11025.479-18E52.79
heart, embryo E18.CNhs11030.1283-20G33.76
heart, neonate N00.CNhs11213.639-21E33.15
heart, neonate N03.CNhs11221.1349-25I22.30
heart, neonate N10.CNhs11118.749-24G14.10
heart, neonate N16.CNhs11209.782-15G16.08
heart, neonate N20.CNhs11127.821-26I66.29
heart, neonate N25.CNhs11196.1351-25D35.49
heart, neonate N30.CNhs11202.1390-42D28.32
hippocampus, adult.CNhs10478.13-16E81.26
hippocampus, neonate N00.CNhs11228.627-43G10.72
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.61
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.20
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I20.61
kidney, embryo E18.CNhs11001.1288-20C71.16
kidney, neonate N00.CNhs11214.646-21G70.63
kidney, neonate N10.CNhs11206.758-6D51.20
kidney, neonate N20.CNhs11113.832-19I11.48
kidney, neonate N25.CNhs11122.1353-25F31.41
kidney, neonate N30.CNhs11203.1385-42H13.33
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F81.00
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E12.47
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.53
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F40.32
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A81.44
liver, neonate N07.CNhs11103.716-20H21.12
liver, neonate N10.CNhs11115.751-24B91.25
liver, neonate N20.CNhs11220.823-25A30.25
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.57
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.48
lung, neonate N00.CNhs11224.640-42C61.17
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A40.33
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H20.58
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.54
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C22.25
medulla oblongata, neonate N30.CNhs11200.1396-42A32.81
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.66
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.01
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.32
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.17
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.65
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.60
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.59
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.72
pituitary gland, embryo E12.CNhs11018.346-16E60.90
pituitary gland, embryo E13.CNhs11009.370-44C70.39
pituitary gland, embryo E14.CNhs11037.398-44A50.00
pituitary gland, embryo E15.CNhs10592.427-16B90.71
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.15
pituitary gland, neonate N00.CNhs11190.1308-22E93.04
placenta, adult pregnant day10.CNhs10472.539-13I77.51
placenta, adult pregnant day17.CNhs10464.577-18G31.48
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.66
skin, neonate N00.CNhs11124.650-25G40.32
skin, neonate N03.CNhs11215.662-22H30.54
skin, neonate N06.CNhs11097.693-20I51.55
skin, neonate N10.CNhs11108.762-6C41.48
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C93.15
spleen, adult.CNhs10465.25-2G20.85
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.74
spleen, neonate N10.CNhs11116.752-24D10.57
spleen, neonate N20.CNhs11112.824-19H10.68
spleen, neonate N25.CNhs11099.1354-25G30.46
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.70
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.20
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.42
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.54
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.33
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.39
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.35
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.00
thymus, embryo E15.CNhs11005.430-45I20.10
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.24
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.67
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.34
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.38
uterus, adult.CNhs10509.92-27E50.73
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.13
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A21.84
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D72.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A62.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.35
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A82.72
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.10
whole body, embryo E12.CNhs10587.857-27C90.80
whole body, embryo E13.CNhs10512.372-23H20.34
whole body, embryo E14.5.CNhs10578.420-27D20.97
whole body, embryo E14.CNhs10519.395-14B10.84
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G51.52
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.47
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.77
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.03
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.73
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.55
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.30
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.62
whole body, embryo E17.5.CNhs10513.490-9F90.19
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.23
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.96
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.93





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
oligodendrocyte precursor cell6.30e-078

Uber anatomy
Ontology termp-valuen
structure with developmental contribution from neural crest1.66e-2192
ectoderm-derived structure8.83e-1795
ectoderm8.83e-1795
presumptive ectoderm8.83e-1795
neurectoderm1.61e-1664
neural plate1.61e-1664
presumptive neural plate1.61e-1664
tube3.25e-16114
ecto-epithelium2.16e-1573
anatomical conduit2.80e-15122
central nervous system7.99e-1573
regional part of nervous system2.22e-1454
nervous system4.85e-1475
neural tube9.44e-1452
neural rod9.44e-1452
future spinal cord9.44e-1452
neural keel9.44e-1452
posterior neural tube2.65e-1012
chordal neural plate2.65e-1012
regional part of brain2.92e-1046
epithelium4.78e-10174
brain7.56e-1047
future brain7.56e-1047
cell layer1.07e-09176
compound organ1.14e-0943
pre-chordal neural plate2.00e-0949
cardiovascular system2.84e-0823
circulatory system2.84e-0823
primary circulatory organ7.53e-0818
heart7.53e-0818
primitive heart tube7.53e-0818
primary heart field7.53e-0818
anterior lateral plate mesoderm7.53e-0818
heart tube7.53e-0818
heart primordium7.53e-0818
cardiac mesoderm7.53e-0818
cardiogenic plate7.53e-0818
heart rudiment7.53e-0818
occipital lobe1.51e-0710
visual cortex1.51e-0710
neocortex1.51e-0710
gray matter6.56e-0734
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