FFCP PHASE1:Mm9::chr7:112703013..112703028,+: Difference between revisions
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{{FFCP|EntrezGene=20597|HGNC=|UniProt=Q04519,Q3UEE0|association_with_transcript=139bp_to_ENSMUST00000046983,NM_011421,uc009iyf.2,uc009iyg.2_5end|description=CAGE_peak_2_at_Smpd1_5end|id=chr7:112703013..112703028,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0002453,6.30e-07,8|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000025!1.34e-15!114;UBERON:0004111!8.51e-15!122;UBERON:0004121!1.53e-14!102;UBERON:0000924!1.53e-14!102;UBERON:0006601!1.53e-14!102;UBERON:0001017!6.97e-13!73;UBERON:0005743!6.97e-13!73;UBERON:0000073!1.41e-12!75;UBERON:0001016!1.41e-12!75;UBERON:0000033!1.80e-12!63;UBERON:0002346!3.07e-12!71;UBERON:0003075!3.07e-12!71;UBERON:0007284!3.07e-12!71;UBERON:0001049!4.63e-11!52;UBERON:0005068!4.63e-11!52;UBERON:0006241!4.63e-11!52;UBERON:0007135!4.63e-11!52;UBERON:0000955!9.80e-10!50;UBERON:0006238!9.80e-10!50;UBERON:0002616!1.44e-09!49;UBERON:0004872!9.17e-09!33;UBERON:0004535!2.24e-08!23;UBERON:0001009!2.24e-08!23;UBERON:0003056!2.65e-08!49;UBERON:0007100!1.34e-07!18;UBERON:0000948!1.34e-07!18;UBERON:0005498!1.34e-07!18;UBERON:0004140!1.34e-07!18;UBERON:0009881!1.34e-07!18;UBERON:0004141!1.34e-07!18;UBERON:0003084!1.34e-07!18;UBERON:0007005!1.34e-07!18;UBERON:0004139!1.34e-07!18;UBERON:0004291!1.34e-07!18;UBERON:0003103!2.07e-07!43;UBERON:0003076!4.28e-07!12;UBERON:0003057!4.28e-07!12;UBERON:0003914!8.41e-07!47|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.66e-21,92;UBERON:0004121,8.83e-17,95;UBERON:0000924,8.83e-17,95;UBERON:0006601,8.83e-17,95;UBERON:0002346,1.61e-16,64;UBERON:0003075,1.61e-16,64;UBERON:0007284,1.61e-16,64;UBERON:0000025,3.25e-16,114;UBERON:0010371,2.16e-15,73;UBERON:0004111,2.80e-15,122;UBERON:0001017,7.99e-15,73;UBERON:0000073,2.22e-14,54;UBERON:0001016,4.85e-14,75;UBERON:0001049,9.44e-14,52;UBERON:0005068,9.44e-14,52;UBERON:0006241,9.44e-14,52;UBERON:0007135,9.44e-14,52;UBERON:0003076,2.65e-10,12;UBERON:0003057,2.65e-10,12;UBERON:0002616,2.92e-10,46;UBERON:0000483,4.78e-10,174;UBERON:0000955,7.56e-10,47;UBERON:0006238,7.56e-10,47;UBERON:0000119,1.07e-09,176;UBERON:0003103,1.14e-09,43;UBERON:0003056,2.00e-09,49;UBERON:0004535,2.84e-08,23;UBERON:0001009,2.84e-08,23;UBERON:0007100,7.53e-08,18;UBERON:0000948,7.53e-08,18;UBERON:0005498,7.53e-08,18;UBERON:0004140,7.53e-08,18;UBERON:0009881,7.53e-08,18;UBERON:0004141,7.53e-08,18;UBERON:0003084,7.53e-08,18;UBERON:0007005,7.53e-08,18;UBERON:0004139,7.53e-08,18;UBERON:0004291,7.53e-08,18;UBERON:0002021,1.51e-07,10;UBERON:0000411,1.51e-07,10;UBERON:0001950,1.51e-07,10;UBERON:0002020,6.56e-07,34|phase1_expression=0.320297694209588,0,0,0,0,0.33575854382378,0,0.129123323441576,0,0,0,0,0,0.0874204024189974,0.666219523631325,0.809901069559304,0,0.315462165358238,0,0,1.19060606211498,0.297872853602656,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0.288851619751275,0.166234645358492,0,0,0,0.523523743973798,0,0,0,1.6366586336825,1.21652317463417,0.550640256485045,4.69434806608824,1.96222640742402,3.51497892375155,4.27745777963423,0.699932108126813,2.87505128729943,0,0,0.336093799142464,0.257259436035947,0.85960031981627,2.06268836910977,1.21389876515759,2.64495489636016,1.90149421051854,0.338844532069132,0,0,1.97773272513395,0.7104801149461,3.59520132622086,4.99483796918021,0.311068836925433,0.135005938331691,0.210324961351382,2.57085885963423,2.20868540951614,0.367472397644862,0.0958454710182364,0,1.10115880999389,1.27687338085188,1.53606533256243,0.659431438650969,0.823388792421687,0.52091337055676,1.3959149950069,3.93933827022176,0.916789486660861,1.76777151284201,1.28134512719193,1.1183966749518,0.37863096666592,0.453429360640713,0.579728977403356,0,0.679971333707751,1.07940638327563,0.649776417447669,0,0.702222100658759,1.1930122580464,0,1.06001872353102,1.12674735821344,0,0,0,0,0,0,0.91347103775248,0.258937883647172,0.445326417194474,0.693941307064543,0.304465478312141,0.691846491768175,0.301445281105245,0.470354828542819,0.502666365318702,0.494389935468748,1.87979163995885,2.65383165584962,0.647067399789637,0.883366073841574,0,0,3.80615036115011,1.46612694769419,0,0,0,0.127070227073065,2.54644086988199,0,0.376963056338593,2.43354048269187,1.27857728665165,2.28566849015516,1.29793010454206,0.407357455401265,1.11966273549084,0.505445516867349,1.26265113531884,1.43132487258974,1.14951052216736,1.0803727788321,0.60281927134286,1.15662048557257,1.2811372028485,1.49922759295566,1.55222022443409,0.215567992932842,0,0,1.31517439456545,0,0,0.411564272815887,0.199034266818493,0,0.257347907114715,0,0.621377317606506,1.40715635988658,0.720248245844059,0.946978942340841,1.18058539048442,1.54267112887378,2.79040733700489,3.75582761959467,3.15266424391358,2.30383789878873,4.10418660197738,6.08016071593918,6.28659945928929,5.48875288227627,8.32079796314305,1.26173969138476,0.720332286654991,0,0,0,0,0.128867461322093,0.605050573870028,0.22237804384487,0.380451252225118,0,0.494096864172033,0.502670417600539,0.198956472041151,0.38992817423824,0,0,0.199141273254367,0.1896679009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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20597 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q04519,Q3UEE0 | |||
|association_with_transcript=139bp_to_ENSMUST00000046983,NM_011421,uc009iyf.2,uc009iyg.2_5end | |||
|cluster_id=chr7:112703013..112703028,+ | |||
|description=CAGE_peak_2_at_Smpd1_5end | |||
|id=chr7:112703013..112703028,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002453,6.30e-07,8 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000025!1.34e-15!114;UBERON:0004111!8.51e-15!122;UBERON:0004121!1.53e-14!102;UBERON:0000924!1.53e-14!102;UBERON:0006601!1.53e-14!102;UBERON:0001017!6.97e-13!73;UBERON:0005743!6.97e-13!73;UBERON:0000073!1.41e-12!75;UBERON:0001016!1.41e-12!75;UBERON:0000033!1.80e-12!63;UBERON:0002346!3.07e-12!71;UBERON:0003075!3.07e-12!71;UBERON:0007284!3.07e-12!71;UBERON:0001049!4.63e-11!52;UBERON:0005068!4.63e-11!52;UBERON:0006241!4.63e-11!52;UBERON:0007135!4.63e-11!52;UBERON:0000955!9.80e-10!50;UBERON:0006238!9.80e-10!50;UBERON:0002616!1.44e-09!49;UBERON:0004872!9.17e-09!33;UBERON:0004535!2.24e-08!23;UBERON:0001009!2.24e-08!23;UBERON:0003056!2.65e-08!49;UBERON:0007100!1.34e-07!18;UBERON:0000948!1.34e-07!18;UBERON:0005498!1.34e-07!18;UBERON:0004140!1.34e-07!18;UBERON:0009881!1.34e-07!18;UBERON:0004141!1.34e-07!18;UBERON:0003084!1.34e-07!18;UBERON:0007005!1.34e-07!18;UBERON:0004139!1.34e-07!18;UBERON:0004291!1.34e-07!18;UBERON:0003103!2.07e-07!43;UBERON:0003076!4.28e-07!12;UBERON:0003057!4.28e-07!12;UBERON:0003914!8.41e-07!47 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.66e-21,92;UBERON:0004121,8.83e-17,95;UBERON:0000924,8.83e-17,95;UBERON:0006601,8.83e-17,95;UBERON:0002346,1.61e-16,64;UBERON:0003075,1.61e-16,64;UBERON:0007284,1.61e-16,64;UBERON:0000025,3.25e-16,114;UBERON:0010371,2.16e-15,73;UBERON:0004111,2.80e-15,122;UBERON:0001017,7.99e-15,73;UBERON:0000073,2.22e-14,54;UBERON:0001016,4.85e-14,75;UBERON:0001049,9.44e-14,52;UBERON:0005068,9.44e-14,52;UBERON:0006241,9.44e-14,52;UBERON:0007135,9.44e-14,52;UBERON:0003076,2.65e-10,12;UBERON:0003057,2.65e-10,12;UBERON:0002616,2.92e-10,46;UBERON:0000483,4.78e-10,174;UBERON:0000955,7.56e-10,47;UBERON:0006238,7.56e-10,47;UBERON:0000119,1.07e-09,176;UBERON:0003103,1.14e-09,43;UBERON:0003056,2.00e-09,49;UBERON:0004535,2.84e-08,23;UBERON:0001009,2.84e-08,23;UBERON:0007100,7.53e-08,18;UBERON:0000948,7.53e-08,18;UBERON:0005498,7.53e-08,18;UBERON:0004140,7.53e-08,18;UBERON:0009881,7.53e-08,18;UBERON:0004141,7.53e-08,18;UBERON:0003084,7.53e-08,18;UBERON:0007005,7.53e-08,18;UBERON:0004139,7.53e-08,18;UBERON:0004291,7.53e-08,18;UBERON:0002021,1.51e-07,10;UBERON:0000411,1.51e-07,10;UBERON:0001950,1.51e-07,10;UBERON:0002020,6.56e-07,34 | |||
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| |||
|short_description=p2@Smpd1 | |||
}} |
Latest revision as of 16:28, 25 September 2015
Short description: | p2@Smpd1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Smpd1_5end |
Coexpression cluster: | NA |
Association with transcript: | 139bp_to_ENSMUST00000046983, NM_011421, uc009iyf.2, uc009iyg.2_5end |
EntrezGene: | Smpd1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
oligodendrocyte precursor cell | 6.30e-07 | 8 |