FFCP PHASE1:Mm9::chr14:122874718..122874729,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr14:122874718..122874729,+
|short_description=p3@Zic2
|description=CAGE_peak_3_at_Zic2_5end
|association_with_transcript=61bp_to_ENSMUST00000075888_5end
|Ent...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=22772 | |EntrezGene=22772 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1661 | |||
|TSSclassifier=NA | |||
|UniProt=F8VPV3 | |UniProt=F8VPV3 | ||
|association_with_transcript=61bp_to_ENSMUST00000075888_5end | |||
|cluster_id=chr14:122874718..122874729,+ | |||
|description=CAGE_peak_3_at_Zic2_5end | |||
|id=chr14:122874718..122874729,+ | |||
|ontology_enrichment_celltype=CL:0002319!1.77e-16!43;CL:0000221!7.86e-16!44;CL:0000133!7.86e-16!44;CL:0000117!2.00e-15!23;CL:0000337!2.00e-15!23;CL:0000055!2.30e-13!50;CL:0000540!1.20e-09!33;CL:0000047!1.20e-09!33;CL:0000031!1.20e-09!33;CL:0000404!1.20e-09!33;CL:0000333!8.25e-09!10;CL:0000095!8.25e-09!10;CL:0000243!8.25e-09!10;CL:0000123!8.25e-09!10;CL:0000125!8.25e-09!10;CL:0000030!8.25e-09!10;CL:0000339!8.25e-09!10;CL:0002453!8.45e-09!8;CL:0000393!1.03e-07!39;CL:0000211!1.03e-07!39;CL:0000128!7.28e-07!6;CL:0000126!7.28e-07!6;CL:0000127!7.28e-07!6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.05e-17,43;CL:0000221,3.60e-17,44;CL:0000133,3.60e-17,44;CL:0000117,2.06e-13,23;CL:0000337,2.06e-13,23;CL:0002453,3.24e-13,8;CL:0000333,2.63e-10,10;CL:0000095,2.63e-10,10;CL:0000243,2.63e-10,10;CL:0000123,2.63e-10,10;CL:0000125,2.63e-10,10;CL:0000030,2.63e-10,10;CL:0000339,2.63e-10,10;CL:0000540,8.60e-10,33;CL:0000047,8.60e-10,33;CL:0000031,8.60e-10,33;CL:0000404,8.60e-10,33;CL:0000128,1.80e-09,6;CL:0000126,1.80e-09,6;CL:0000127,1.80e-09,6;CL:0002321,9.98e-09,70;CL:0000393,9.29e-08,39;CL:0000211,9.29e-08,39;CL:0002613,2.02e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.42e-33!75;UBERON:0001016!1.42e-33!75;UBERON:0001017!5.54e-33!73;UBERON:0005743!5.54e-33!73;UBERON:0000033!5.66e-29!63;UBERON:0001049!7.38e-29!52;UBERON:0005068!7.38e-29!52;UBERON:0006241!7.38e-29!52;UBERON:0007135!7.38e-29!52;UBERON:0000955!7.04e-28!50;UBERON:0006238!7.04e-28!50;UBERON:0002616!6.71e-27!49;UBERON:0004121!4.23e-26!102;UBERON:0000924!4.23e-26!102;UBERON:0006601!4.23e-26!102;UBERON:0002346!2.53e-24!71;UBERON:0003075!2.53e-24!71;UBERON:0007284!2.53e-24!71;UBERON:0003056!1.16e-21!49;UBERON:0003080!3.19e-19!40;UBERON:0002780!1.00e-18!39;UBERON:0001890!1.00e-18!39;UBERON:0006240!1.00e-18!39;UBERON:0000153!2.46e-17!94;UBERON:0007811!4.54e-17!86;UBERON:0002020!1.23e-14!34;UBERON:0002791!3.39e-11!29;UBERON:0003528!3.39e-11!29;UBERON:0001893!3.39e-11!29;UBERON:0003076!2.69e-10!12;UBERON:0003057!2.69e-10!12;UBERON:0001894!3.58e-09!10;UBERON:0006222!3.58e-09!10;UBERON:0002420!8.90e-08!8;UBERON:0007245!8.90e-08!8;UBERON:0010009!8.90e-08!8;UBERON:0010011!8.90e-08!8;UBERON:0000454!8.90e-08!8;UBERON:0000007!1.51e-07!8;UBERON:0003296!1.51e-07!8;UBERON:0010133!1.51e-07!8 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.08e-36,73;UBERON:0001016,1.44e-34,75;UBERON:0000073,4.11e-30,54;UBERON:0004121,7.04e-27,95;UBERON:0000924,7.04e-27,95;UBERON:0006601,7.04e-27,95;UBERON:0001049,3.71e-25,52;UBERON:0005068,3.71e-25,52;UBERON:0006241,3.71e-25,52;UBERON:0007135,3.71e-25,52;UBERON:0000955,1.02e-22,47;UBERON:0006238,1.02e-22,47;UBERON:0002616,2.95e-21,46;UBERON:0002346,1.36e-20,64;UBERON:0003075,1.36e-20,64;UBERON:0007284,1.36e-20,64;UBERON:0010371,1.28e-18,73;UBERON:0002780,3.63e-17,39;UBERON:0001890,3.63e-17,39;UBERON:0006240,3.63e-17,39;UBERON:0003080,1.33e-16,40;UBERON:0001894,2.17e-14,10;UBERON:0006222,2.17e-14,10;UBERON:0003056,5.93e-14,49;UBERON:0010314,3.40e-13,92;UBERON:0000007,3.22e-11,8;UBERON:0003296,3.22e-11,8;UBERON:0010133,3.22e-11,8;UBERON:0002420,3.34e-11,8;UBERON:0007245,3.34e-11,8;UBERON:0010009,3.34e-11,8;UBERON:0010011,3.34e-11,8;UBERON:0000454,3.34e-11,8;UBERON:0002020,9.27e-11,34;UBERON:0000369,3.90e-10,5;UBERON:0002435,3.90e-10,5;UBERON:0000204,3.90e-10,5;UBERON:0010082,3.90e-10,5;UBERON:0003076,2.10e-09,12;UBERON:0003057,2.10e-09,12;UBERON:0011216,1.14e-07,194;UBERON:0000025,1.32e-07,114;UBERON:0004111,2.09e-07,122;UBERON:0003528,3.04e-07,29;UBERON:0002791,3.04e-07,29;UBERON:0001893,3.04e-07,29 | |||
|phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,24.2541316747892,0.436050312760893,7.68901639570651,10.304784650937,4.4795654920116,5.75010257459886,0,0,0,0,0,0,0.809265843438391,2.11596391708813,3.1691570175309,6.43804610931351,11.5608323494448,0,0,0,5.09320187881288,5.76327457982332,0.725827286159344,0.810035629990144,0.841299845405528,1.71390590642282,0.883474163806454,0.122490799214954,0.0958454710182364,0,1.10115880999389,4.46905683298157,2.15049146558741,4.87979264601717,6.31264740856627,7.8137005583514,1.95428099300967,0.56276261003168,1.06958773443767,1.17851434189467,1.42371680799103,1.86399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3957246326466,17.1746299587033,0,0,0,0,0.449371918214468,1.83000241127451,1.00523481690292,1.04294592115366,0,2.70124457927428,1.78465389374533,0,0,0,0,1.30120442962704,0.229902104433473,0.360124259610698,0.753524089178575,0.884474488967262,0,0.843315521037559,0.776110112217047,0.862271971731369,0.756424320671277,0.351902248327898,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,2.6755199218614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,3.85585579706168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,1.8006109403131,2.71653235943784,2.7863814554107,2.48276327099183,4.10248280484762,1.48094118541909,1.8267896946876,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,1.25599399253266,0.335769232728157,0,0,0,0,0,0,0.920650473014354,0,0.171853182343688,0,0,0,0.900642406448441,0.453142408984205,0.51776031175182,0.415149390336707,1.59609949360412,0.853668028770671,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.448176066834085,0.459483751644906,0.476293691283074,0.463537303779422,0.38581844092741,0.412085900803307,0.441596760403192,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.423073039458382,0.548783918618318,0,0.271608227691724,0,0.237270036248348,0.29551344712669,0.409231043169689,0.464810523557898,0.385813221962283,1.99848462350357,0,0.429742108096597,0,0.220591419119515,0 | |phase1_expression=2.24208385946712,0,0,0,0,0,0,0,0.281577444303333,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251793635951155,0,0,24.2541316747892,0.436050312760893,7.68901639570651,10.304784650937,4.4795654920116,5.75010257459886,0,0,0,0,0,0,0.809265843438391,2.11596391708813,3.1691570175309,6.43804610931351,11.5608323494448,0,0,0,5.09320187881288,5.76327457982332,0.725827286159344,0.810035629990144,0.841299845405528,1.71390590642282,0.883474163806454,0.122490799214954,0.0958454710182364,0,1.10115880999389,4.46905683298157,2.15049146558741,4.87979264601717,6.31264740856627,7.8137005583514,1.95428099300967,0.56276261003168,1.06958773443767,1.17851434189467,1.42371680799103,1.86399445825301,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0.421333260395256,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3957246326466,17.1746299587033,0,0,0,0,0.449371918214468,1.83000241127451,1.00523481690292,1.04294592115366,0,2.70124457927428,1.78465389374533,0,0,0,0,1.30120442962704,0.229902104433473,0.360124259610698,0.753524089178575,0.884474488967262,0,0.843315521037559,0.776110112217047,0.862271971731369,0.756424320671277,0.351902248327898,0.219195732427575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47202963994889,2.6755199218614,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.963303539926752,1.17211686592203,0,0,0,0,0,0,0,0,0,0,0,3.85585579706168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,1.8006109403131,2.71653235943784,2.7863814554107,2.48276327099183,4.10248280484762,1.48094118541909,1.8267896946876,0,0,0,0,0,0,0,0,0,0.556275906031529,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10992976687032,1.25599399253266,0.335769232728157,0,0,0,0,0,0,0.920650473014354,0,0.171853182343688,0,0,0,0.900642406448441,0.453142408984205,0.51776031175182,0.415149390336707,1.59609949360412,0.853668028770671,0.243106717068294,0.419226325255965,0.367687016900028,0.222246727801615,0.412070114477788,0,0,0,0.188626341386076,0.0936415074698824,0.448176066834085,0.459483751644906,0.476293691283074,0.463537303779422,0.38581844092741,0.412085900803307,0.441596760403192,0,0.177475806159338,0.238436189947321,0.145346416632329,0,0.423073039458382,0.548783918618318,0,0.271608227691724,0,0.237270036248348,0.29551344712669,0.409231043169689,0.464810523557898,0.385813221962283,1.99848462350357,0,0.429742108096597,0,0.220591419119515,0 | ||
|short_description=p3@Zic2 | |||
}} | }} |
Latest revision as of 17:17, 25 September 2015
Short description: | p3@Zic2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Zic2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1661 |
Association with transcript: | 61bp_to_ENSMUST00000075888_5end |
EntrezGene: | Zic2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.05e-17 | 43 |
ectodermal cell | 3.60e-17 | 44 |
neurectodermal cell | 3.60e-17 | 44 |
CNS neuron (sensu Vertebrata) | 2.06e-13 | 23 |
neuroblast (sensu Vertebrata) | 2.06e-13 | 23 |
oligodendrocyte precursor cell | 3.24e-13 | 8 |
migratory neural crest cell | 2.63e-10 | 10 |
neuron associated cell | 2.63e-10 | 10 |
glial cell (sensu Vertebrata) | 2.63e-10 | 10 |
neuron associated cell (sensu Vertebrata) | 2.63e-10 | 10 |
glial cell | 2.63e-10 | 10 |
glioblast | 2.63e-10 | 10 |
glioblast (sensu Vertebrata) | 2.63e-10 | 10 |
neuron | 8.60e-10 | 33 |
neuronal stem cell | 8.60e-10 | 33 |
neuroblast | 8.60e-10 | 33 |
electrically signaling cell | 8.60e-10 | 33 |
oligodendrocyte | 1.80e-09 | 6 |
macroglial cell | 1.80e-09 | 6 |
astrocyte | 1.80e-09 | 6 |
embryonic cell | 9.98e-09 | 70 |
electrically responsive cell | 9.29e-08 | 39 |
electrically active cell | 9.29e-08 | 39 |
striatum neuron | 2.02e-07 | 3 |