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FFCP PHASE1:Mm9::chr3:80606601..80606652,-: Difference between revisions

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(Created page with "{{FFCP |id=chr3:80606601..80606652,- |short_description=p1@Gria2 |description=CAGE_peak_1_at_Gria2_5end |association_with_transcript=60bp_to_ENSMUST00000075316,ENSMUST0000...")
 
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{{FFCP
{{FFCP
|id=chr3:80606601..80606652,-
|DHSsupport=NA
|short_description=p1@Gria2
|DPIdataset=NA
|description=CAGE_peak_1_at_Gria2_5end
|association_with_transcript=60bp_to_ENSMUST00000075316,ENSMUST00000107745,ENSMUST00000107746,NM_001039195,NM_001083806,NM_013540,uc008poa.1,uc008pob.1,uc008poc.1,uc008pod.1,uc008poe.1_5end
|EntrezGene=14800
|EntrezGene=14800
|HGNC=
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=G5E8H1,E9QKC0,P23819,Q4LG64,Q80VM6
|UniProt=G5E8H1,E9QKC0,P23819,Q4LG64,Q80VM6
|association_with_transcript=60bp_to_ENSMUST00000075316,ENSMUST00000107745,ENSMUST00000107746,NM_001039195,NM_001083806,NM_013540,uc008poa.1,uc008pob.1,uc008poc.1,uc008pod.1,uc008poe.1_5end
|cluster_id=chr3:80606601..80606652,-
|description=CAGE_peak_1_at_Gria2_5end
|id=chr3:80606601..80606652,-
|ontology_enrichment_celltype=CL:0000540!9.06e-15!33;CL:0000047!9.06e-15!33;CL:0000031!9.06e-15!33;CL:0000404!9.06e-15!33;CL:0000117!1.00e-13!23;CL:0000337!1.00e-13!23;CL:0000221!5.03e-12!44;CL:0000133!5.03e-12!44;CL:0002319!6.98e-12!43;CL:0000393!5.36e-10!39;CL:0000211!5.36e-10!39;CL:0000055!6.70e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000540,5.22e-18,33;CL:0000047,5.22e-18,33;CL:0000031,5.22e-18,33;CL:0000404,5.22e-18,33;CL:0000117,4.22e-17,23;CL:0000337,4.22e-17,23;CL:0000393,2.11e-13,39;CL:0000211,2.11e-13,39;CL:0000221,4.29e-12,44;CL:0000133,4.29e-12,44;CL:0002319,6.62e-12,43
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!3.14e-30!73;UBERON:0005743!3.14e-30!73;UBERON:0000073!6.01e-30!75;UBERON:0001016!6.01e-30!75;UBERON:0002346!5.52e-29!71;UBERON:0003075!5.52e-29!71;UBERON:0007284!5.52e-29!71;UBERON:0004121!9.33e-28!102;UBERON:0000924!9.33e-28!102;UBERON:0006601!9.33e-28!102;UBERON:0001049!6.58e-25!52;UBERON:0005068!6.58e-25!52;UBERON:0006241!6.58e-25!52;UBERON:0007135!6.58e-25!52;UBERON:0000033!6.84e-24!63;UBERON:0000955!8.38e-24!50;UBERON:0006238!8.38e-24!50;UBERON:0002616!5.44e-23!49;UBERON:0003056!1.14e-21!49;UBERON:0002020!4.08e-20!34;UBERON:0003080!1.02e-19!40;UBERON:0002780!4.65e-19!39;UBERON:0001890!4.65e-19!39;UBERON:0006240!4.65e-19!39;UBERON:0002791!5.35e-17!29;UBERON:0003528!5.35e-17!29;UBERON:0001893!5.35e-17!29;UBERON:0007811!8.87e-13!86;UBERON:0000153!1.46e-12!94;UBERON:0000956!2.36e-12!21;UBERON:0001869!2.36e-12!21;UBERON:0000203!2.36e-12!21;UBERON:0002619!5.62e-10!17;UBERON:0002021!1.54e-08!10;UBERON:0000411!1.54e-08!10;UBERON:0001950!1.54e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0001017,8.32e-35,73;UBERON:0001016,3.37e-33,75;UBERON:0002346,2.82e-32,64;UBERON:0003075,2.82e-32,64;UBERON:0007284,2.82e-32,64;UBERON:0000073,3.77e-31,54;UBERON:0001049,2.20e-29,52;UBERON:0005068,2.20e-29,52;UBERON:0006241,2.20e-29,52;UBERON:0007135,2.20e-29,52;UBERON:0004121,2.44e-29,95;UBERON:0000924,2.44e-29,95;UBERON:0006601,2.44e-29,95;UBERON:0010371,2.23e-26,73;UBERON:0000955,1.61e-25,47;UBERON:0006238,1.61e-25,47;UBERON:0003056,5.53e-25,49;UBERON:0002020,1.11e-24,34;UBERON:0002616,1.60e-24,46;UBERON:0003080,2.48e-23,40;UBERON:0002780,1.68e-22,39;UBERON:0001890,1.68e-22,39;UBERON:0006240,1.68e-22,39;UBERON:0003528,1.06e-20,29;UBERON:0002791,1.06e-20,29;UBERON:0001893,1.06e-20,29;UBERON:0010314,1.12e-20,92;UBERON:0000956,8.83e-15,21;UBERON:0001869,8.83e-15,21;UBERON:0000203,8.83e-15,21;UBERON:0002619,9.32e-12,17;UBERON:0002021,1.78e-10,10;UBERON:0000411,1.78e-10,10;UBERON:0001950,1.78e-10,10;UBERON:0002420,4.30e-07,8;UBERON:0007245,4.30e-07,8;UBERON:0010009,4.30e-07,8;UBERON:0010011,4.30e-07,8;UBERON:0000454,4.30e-07,8
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.0027273044145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,12.7459370341547,13.2247744818008,12.0427966666174,0,0,0,0,0,0.898800331555214,3.07374644257244,35.1507785725739,16.4707244764663,19.9808713283813,20.2812198926701,23.412065340871,20.4559634688973,14.185129710699,18.3843757322004,25.3266526298594,36.2632040161933,32.2573719838111,12.6610836220986,14.0890971147711,16.6692278578163,13.959149950069,33.7657566019008,45.6866760852662,38.0070875261031,49.830088279686,26.2823218613674,0.302904773332736,0.226714680320357,0,0,0,0.539703191637817,0,0,2.66844398250329,0,0,0,1.54927761754349,0,0,0,0,0,0,2.16949371466214,0,3.26572705942614,1.38788261412909,2.43572382649713,1.15307748628029,2.11011696773672,2.4693628498498,0.879666139307728,0,0,0,0.161766849947409,0,0,0,35.4264764383972,50.4766563420427,0,0,0,0,37.148078572396,93.7876235778184,57.9266563240305,119.069659331709,135.273476927745,41.3498208673525,74.955463537304,0.203678727700633,0.746441823660558,3.28539585963777,4.20883711772948,0.780722657776222,1.14951052216736,1.62055916824814,4.06903008156431,5.71506592871154,6.79002717509704,7.96464658757695,12.1590584247337,0,0.756424320671277,1.05570674498369,1.53437012699302,1.94633074457919,0.696504333044333,0.205782136407943,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,169.914278439815,58.5527244438128,0,0,0.639864751605702,0.696710015581316,0.38660238396628,0,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,12.2018448390722,21.4497386463732,0,0,2.83957397474631,2.73307121007647,6.03185513651837,2.15071918157297,3.34198011123591,2.83076530788832,2.42886421004937,8.18316402151673,5.13874111330481,121.459457607443,0,0.534196811001766,0.325773918707152,0.164970122972535,1.32745138339963,0.485561272309963,0,0.943025398779491,0,0,0.775284879504663,0.363533729477506,2.13898427030833,0.316036757935816,0,0,6.46835250932197,1.08036656418786,0.646793418913773,1.28602221018955,3.54680467284547,2.85390108163313,4.60737257685939,1.2178597964584,0,0,0,0,0,0.0603129249281559,0,0.492422699235184,0.291480836629851,18.913380805072,0,1.23832120777933,0.185194527369712,0.188368457004691,0.136694227721025,0,0.169978429993855,0.139951452323658,0.552799895217695,0.954670618015114,0.158167996790568,1.01659733563424,0.540026704109006,1.04544148007234,0.87345025498471,0.269728692769641,0.743881101528023,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0.201652370273681,0,0.192423683280659,0.467507608726276,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,83.0185208647088,116.462284836316,100.829610365334,90.222920730436,106.87287308422,103.488963942389,110.028667537784,105.825482757692,101.503899612462,104.587582973868,0.62272408550506,6.3843979744165,5.29274177837816,10.6966955510049,4.61148957781561,6.25067928730048,8.00088220085815,8.65347240403356,6.4183841918363,9.6024940470243,10.1391719956096,10.9403278003924,11.7988299412052,11.3964771280667,12.5783677012793,6.66811167796303,10.0819363572024,10.2241886845764,8.24171801606613,9.56792980873583,7.88599280486455,11.3584515941976,10.9680647375768,12.0637525804833,11.7636725519163,8.96914843651771,10.426894453748,12.3642764375786,12.4939784738193,8.41713407486608,8.89762635931306,9.65343927280522,10.6400071224119,12.7048209772492,10.2240503820005,12.7403394748352,7.71974307869848,6.66100267549725,2.29545998482612,1.32354851471709,0.231867835620421
|phase1_expression=0.160148847104794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.0027273044145,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.65407546914134,0,0.58328969722285,0.139986421625363,0,0,0,0,0,0,0,12.7459370341547,13.2247744818008,12.0427966666174,0,0,0,0,0,0.898800331555214,3.07374644257244,35.1507785725739,16.4707244764663,19.9808713283813,20.2812198926701,23.412065340871,20.4559634688973,14.185129710699,18.3843757322004,25.3266526298594,36.2632040161933,32.2573719838111,12.6610836220986,14.0890971147711,16.6692278578163,13.959149950069,33.7657566019008,45.6866760852662,38.0070875261031,49.830088279686,26.2823218613674,0.302904773332736,0.226714680320357,0,0,0,0.539703191637817,0,0,2.66844398250329,0,0,0,1.54927761754349,0,0,0,0,0,0,2.16949371466214,0,3.26572705942614,1.38788261412909,2.43572382649713,1.15307748628029,2.11011696773672,2.4693628498498,0.879666139307728,0,0,0,0.161766849947409,0,0,0,35.4264764383972,50.4766563420427,0,0,0,0,37.148078572396,93.7876235778184,57.9266563240305,119.069659331709,135.273476927745,41.3498208673525,74.955463537304,0.203678727700633,0.746441823660558,3.28539585963777,4.20883711772948,0.780722657776222,1.14951052216736,1.62055916824814,4.06903008156431,5.71506592871154,6.79002717509704,7.96464658757695,12.1590584247337,0,0.756424320671277,1.05570674498369,1.53437012699302,1.94633074457919,0.696504333044333,0.205782136407943,0.995171334092466,0,0,0,0.207125772535502,0.234526059981096,0,0,0,0,0,0,0,0,0,0,0,0,0,169.914278439815,58.5527244438128,0,0,0.639864751605702,0.696710015581316,0.38660238396628,0,0.444756087689741,0.190225626112559,0.474529061544512,0.164698954724011,0.502670417600539,0.198956472041151,0.19496408711912,0,0,0,0,0.342745537829186,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0.162964976442026,0.169745085775188,0,0.167506257441816,0,0.195133647857799,0,0,0,0.163863314715738,0.172684981865896,0,0,0,0,0,12.2018448390722,21.4497386463732,0,0,2.83957397474631,2.73307121007647,6.03185513651837,2.15071918157297,3.34198011123591,2.83076530788832,2.42886421004937,8.18316402151673,5.13874111330481,121.459457607443,0,0.534196811001766,0.325773918707152,0.164970122972535,1.32745138339963,0.485561272309963,0,0.943025398779491,0,0,0.775284879504663,0.363533729477506,2.13898427030833,0.316036757935816,0,0,6.46835250932197,1.08036656418786,0.646793418913773,1.28602221018955,3.54680467284547,2.85390108163313,4.60737257685939,1.2178597964584,0,0,0,0,0,0.0603129249281559,0,0.492422699235184,0.291480836629851,18.913380805072,0,1.23832120777933,0.185194527369712,0.188368457004691,0.136694227721025,0,0.169978429993855,0.139951452323658,0.552799895217695,0.954670618015114,0.158167996790568,1.01659733563424,0.540026704109006,1.04544148007234,0.87345025498471,0.269728692769641,0.743881101528023,0.26175594198403,0.129614973291793,0,0,0,0,0,0,0.168956125490778,0,0.13020438484395,0.209718688851422,0,0,0.316011120628178,0.202725215290164,0,0,0,0.198681354781265,0,0,0.100966449948148,0,0.201652370273681,0,0.192423683280659,0.467507608726276,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,83.0185208647088,116.462284836316,100.829610365334,90.222920730436,106.87287308422,103.488963942389,110.028667537784,105.825482757692,101.503899612462,104.587582973868,0.62272408550506,6.3843979744165,5.29274177837816,10.6966955510049,4.61148957781561,6.25067928730048,8.00088220085815,8.65347240403356,6.4183841918363,9.6024940470243,10.1391719956096,10.9403278003924,11.7988299412052,11.3964771280667,12.5783677012793,6.66811167796303,10.0819363572024,10.2241886845764,8.24171801606613,9.56792980873583,7.88599280486455,11.3584515941976,10.9680647375768,12.0637525804833,11.7636725519163,8.96914843651771,10.426894453748,12.3642764375786,12.4939784738193,8.41713407486608,8.89762635931306,9.65343927280522,10.6400071224119,12.7048209772492,10.2240503820005,12.7403394748352,7.71974307869848,6.66100267549725,2.29545998482612,1.32354851471709,0.231867835620421
|short_description=p1@Gria2
}}
}}

Latest revision as of 17:45, 25 September 2015

Short description:p1@Gria2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Gria2_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: 60bp_to_ENSMUST00000075316, ENSMUST00000107745, ENSMUST00000107746, NM_001039195, NM_001083806, NM_013540, uc008poa.1, uc008pob.1, uc008poc.1, uc008pod.1, uc008poe.1_5end
EntrezGene:Gria2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Gria2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.16
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A325.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.65
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.14
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C312.75
Mouse Granule cells, donor2.CNhs12357.11731-123E313.22
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.90
Mouse Microglia, donor2.CNhs12634.11736-123E83.07
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D535.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F516.47
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D919.98
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F120.28
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D523.41
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.46
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.19
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D618.38
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D325.33
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F336.26
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D732.26
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F414.09
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D816.67
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E413.96
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E533.77
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I645.69
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D638.01
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F649.83
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E126.28
Mouse Schwann, donor1.CNhs12507.11728-123D90.30
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A72.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.55
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B62.17
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.27
adrenal gland, embryo E14.CNhs11038.406-44C51.39
adrenal gland, embryo E16.CNhs11004.1254-43D62.44
adrenal gland, embryo E17.CNhs11043.1263-45I11.15
adrenal gland, embryo E18.CNhs11026.1262-18F52.11
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I30.88
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B235.43
cerebellum, neonate N30.CNhs11135.1395-42I250.48
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A437.15
corpus striatum, adult.CNhs10487.19-21D893.79
corpus striatum, neonate N00.CNhs11226.630-43F157.93
cortex, adult.CNhs10473.12-14D5119.07
cortex, neonate N30.CNhs11107.1392-42F2135.27
diencephalon, adult.CNhs10482.20-12F241.35
diencephalon, neonate N30.CNhs11201.1388-42B274.96
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.20
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.75
epididymis, adult.CNhs10490.58-23B23.29
eyeball, adult.CNhs10484.31-12G44.21
eyeball, embryo E12.CNhs11016.345-16C60.78
eyeball, embryo E14.CNhs10521.399-16E21.15
eyeball, embryo E15.CNhs10593.426-16C91.62
eyeball, embryo E17.CNhs11023.1261-18D44.07
eyeball, neonate N00.CNhs11207.633-15C65.72
eyeball, neonate N01.CNhs11140.1532-43E76.79
eyeball, neonate N02.CNhs11205.1551-44G87.96
eyeball, neonate N16.CNhs11188.777-19A212.16
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.76
forelimb, embryo E13.CNhs10589.384-1E21.06
forelimb, embryo E14.CNhs10577.413-26A81.53
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C40.70
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I61.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E8169.91
hippocampus, neonate N00.CNhs11228.627-43G158.55
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.64
intestine, embryo E13.CNhs11010.381-16D50.70
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.19
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.50
intestine, neonate N07.CNhs11095.720-20F20.20
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.34
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.19
kidney, neonate N00.CNhs11214.646-21G70.14
kidney, neonate N10.CNhs11206.758-6D50.06
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.16
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C212.20
medulla oblongata, neonate N30.CNhs11200.1396-42A321.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.84
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.73
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E36.03
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.15
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D83.34
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I9121.46
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.53
ovary, neonate N00.CNhs11217.1299-22I40.33
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E41.33
pancreas, embryo E14.CNhs11012.405-44F40.49
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.94
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.78
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D82.14
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G86.47
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.65
pituitary gland, embryo E14.CNhs11037.398-44A51.29
pituitary gland, embryo E15.CNhs10592.427-16B93.55
pituitary gland, embryo E16.CNhs11036.449-43F62.85
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E91.22
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.49
small intestine, neonate N16.CNhs11114.790-21I10.29
spinal cord, adult.CNhs10505.24-13C918.91
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C11.24
spleen, embryo E18.CNhs11011.1271-21F20.19
spleen, neonate N10.CNhs11116.752-24D10.19
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.55
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E30.16
stomach, embryo E15.CNhs10603.1252-16G81.02
stomach, embryo E16.CNhs11022.459-17D40.54
stomach, embryo E17.CNhs11006.1035-18D51.05
stomach, embryo E18.CNhs10999.1286-20C60.87
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.74
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.13
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.17
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.13
testis, neonate N10.CNhs11204.763-44D90.21
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.32
thymus, embryo E14.CNhs11041.402-44I40.20
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.20
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.10
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.20
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.19
thymus, neonate N30.CNhs11132.1393-42G20.47
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A183.02
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A2116.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A3100.83
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D790.22
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4106.87
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5103.49
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6110.03
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A7105.83
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8101.50
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9104.59
whole body, embryo E11.CNhs11014.324-5I80.62
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H25.29
whole body, embryo E14.5.CNhs10578.420-27D210.70
whole body, embryo E14.CNhs10519.395-14B14.61
whole body, embryo E16.CNhs10514.453-14F26.25
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G58.65
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.42
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G510.14
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G510.94
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.80
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.40
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.58
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G56.67
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.08
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G510.22
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G58.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.57
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G57.89
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.36
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G510.97
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.06
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G511.76
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G58.97
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.43
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G512.36
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G512.49
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G58.90
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G59.65
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G510.64
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G512.70
whole body, embryo E17.5.CNhs10513.490-9F910.22
whole body, embryo E17.CNhs10517.475-3I512.74
whole body, embryo E18.CNhs10516.493-3B37.72
whole body, neonate N00.CNhs10525.657-19C26.66
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D11.32
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
neuron5.22e-1833
neuronal stem cell5.22e-1833
neuroblast5.22e-1833
electrically signaling cell5.22e-1833
CNS neuron (sensu Vertebrata)4.22e-1723
neuroblast (sensu Vertebrata)4.22e-1723
electrically responsive cell2.11e-1339
electrically active cell2.11e-1339
ectodermal cell4.29e-1244
neurectodermal cell4.29e-1244
neural cell6.62e-1243

Uber anatomy
Ontology termp-valuen
central nervous system8.32e-3573
nervous system3.37e-3375
neurectoderm2.82e-3264
neural plate2.82e-3264
presumptive neural plate2.82e-3264
regional part of nervous system3.77e-3154
neural tube2.20e-2952
neural rod2.20e-2952
future spinal cord2.20e-2952
neural keel2.20e-2952
ectoderm-derived structure2.44e-2995
ectoderm2.44e-2995
presumptive ectoderm2.44e-2995
ecto-epithelium2.23e-2673
brain1.61e-2547
future brain1.61e-2547
pre-chordal neural plate5.53e-2549
gray matter1.11e-2434
regional part of brain1.60e-2446
anterior neural tube2.48e-2340
regional part of forebrain1.68e-2239
forebrain1.68e-2239
future forebrain1.68e-2239
brain grey matter1.06e-2029
regional part of telencephalon1.06e-2029
telencephalon1.06e-2029
structure with developmental contribution from neural crest1.12e-2092
cerebral cortex8.83e-1521
cerebral hemisphere8.83e-1521
pallium8.83e-1521
regional part of cerebral cortex9.32e-1217
occipital lobe1.78e-1010
visual cortex1.78e-1010
neocortex1.78e-1010
basal ganglion4.30e-078
nuclear complex of neuraxis4.30e-078
aggregate regional part of brain4.30e-078
collection of basal ganglia4.30e-078
cerebral subcortex4.30e-078
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