FFCP PHASE1:Mm9::chr5:148118639..148118715,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=12591 | |EntrezGene=12591 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=489 | |||
|TSSclassifier=NA | |||
|UniProt=P43241,Q543L9 | |UniProt=P43241,Q543L9 | ||
|association_with_transcript=109bp_to_NM_007673,uc009anz.1_5end | |association_with_transcript=109bp_to_NM_007673,uc009anz.1_5end | ||
|cluster_id=chr5:148118639..148118715,- | |||
|description=CAGE_peak_1_at_Cdx2_5end | |description=CAGE_peak_1_at_Cdx2_5end | ||
|id=chr5:148118639..148118715,- | |id=chr5:148118639..148118715,- | ||
|ontology_enrichment_celltype=CL:0002563!1.30e-08!9;CL:0002251!1.30e-08!9 | |ontology_enrichment_celltype=CL:0002563!1.30e-08!9;CL:0002251!1.30e-08!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0002563,4.96e-10,9;CL:0002251,4.96e-10,9;CL:0000239,2.91e-07,6;CL:0000677,2.91e-07,6;CL:0000584,2.91e-07,6 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.57e-22!59;UBERON:0000160!1.88e-20!43;UBERON:0000344!3.71e-14!15;UBERON:0001242!1.60e-12!13;UBERON:0000060!1.60e-12!13;UBERON:0001262!1.60e-12!13;UBERON:0004786!1.60e-12!13;UBERON:0004923!2.24e-11!24;UBERON:0003350!1.30e-08!9;UBERON:0004808!1.30e-08!9;UBERON:0001277!1.30e-08!9;UBERON:0004119!1.97e-08!130;UBERON:0000925!1.97e-08!130;UBERON:0006595!1.97e-08!130;UBERON:0001007!1.34e-07!128;UBERON:0001555!1.34e-07!128;UBERON:0007026!1.34e-07!128;UBERON:0004921!9.45e-07!126;UBERON:0004185!9.45e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.75e-35,31;UBERON:0005409,3.10e-28,47;UBERON:0000344,1.10e-16,15;UBERON:0001242,1.01e-14,13;UBERON:0001262,1.01e-14,13;UBERON:0004786,1.01e-14,13;UBERON:0004923,7.91e-13,24;UBERON:0003350,4.96e-10,9;UBERON:0004808,4.96e-10,9;UBERON:0001277,4.96e-10,9;UBERON:0000485,9.18e-08,11 | |||
|phase1_expression=0,122.141392673776,126.489788550291,71.0790896571051,69.1236107325959,65.3050367737251,67.5140531321069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.9559765032989,86.9461175244574,110.252537110084,96.4906871396328,109.02844373906,246.460375034917,170.876427977233,139.025030180876,0,0,0,65.8581693032906,76.966640800982,76.9718473109131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.26933172869562,0,0,0,0,0,0,0,0,0,0,26.71902785426,0,0,0,0,0.230615497256059,0,0,0,9.64060374164058,0,0,0,0,0,356.008263926613,0,0,194.913733124155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,132.497931976503,143.067756564977,15.9966187901425,24.1526138734856,61.5986465119606,100.236711737801,126.088350860041,141.147414575519,169.406874971391,153.664124757502,135.972347960946,119.771796168773,140.764070900005,140.215827750059,133.357176772686,159.313018603494,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0.763877555344259,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.848725428875941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,2.72091201268276,0,0,0,26.6181141963268,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,16.8963629805871,48.0858800860872,0,0,0,0,0,0,140.493763255588,0,0,0,0,0,0.136694227721025,0,0.169978429993855,0,0,1.90934123603023,0.632671987162271,2.43983360552218,12.2046035128635,2.50905955217362,5.45906409365444,0.269728692769641,0.991841468704031,0.523511883968059,302.262117716461,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0,0.233753804363138,0,29.5241317987506,99.582380836518,26.6936540018885,0,3.37828455812128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,1.19707462020309,0.170733605754134,3.40349403895612,1.46729213839588,7.90527086335061,6.44515510624684,4.94484137373346,3.20919209591815,5.05394423527595,6.08350319736575,6.79054828989874,4.68207537349412,6.53056554529667,4.65227298540468,5.71552429539688,6.14186927507734,5.40145817298374,9.06588981767275,7.21274708658547,6.17164654293748,6.56660482789549,5.48403236878838,6.24989591519013,6.21121910741182,6.17686637609238,5.67076715905595,3.94604567156764,6.79020569229309,7.85599180320834,6.8808310512021,6.40279135441163,6.13846564754534,6.04253680625267,5.20847849649082,0,7.25187986180766,10.3138105943183,0,0,0 | |phase1_expression=0,122.141392673776,126.489788550291,71.0790896571051,69.1236107325959,65.3050367737251,67.5140531321069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,84.9559765032989,86.9461175244574,110.252537110084,96.4906871396328,109.02844373906,246.460375034917,170.876427977233,139.025030180876,0,0,0,65.8581693032906,76.966640800982,76.9718473109131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.26933172869562,0,0,0,0,0,0,0,0,0,0,26.71902785426,0,0,0,0,0.230615497256059,0,0,0,9.64060374164058,0,0,0,0,0,356.008263926613,0,0,194.913733124155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215567992932842,0,0,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,132.497931976503,143.067756564977,15.9966187901425,24.1526138734856,61.5986465119606,100.236711737801,126.088350860041,141.147414575519,169.406874971391,153.664124757502,135.972347960946,119.771796168773,140.764070900005,140.215827750059,133.357176772686,159.313018603494,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0.333690211432188,0.196558995113203,0,0.202860121388503,0,0.763877555344259,0,0,0,0,0,0,0,0,0,0,0,0.162964976442026,0.848725428875941,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,0,0,2.72091201268276,0,0,0,26.6181141963268,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0,0,16.8963629805871,48.0858800860872,0,0,0,0,0,0,140.493763255588,0,0,0,0,0,0.136694227721025,0,0.169978429993855,0,0,1.90934123603023,0.632671987162271,2.43983360552218,12.2046035128635,2.50905955217362,5.45906409365444,0.269728692769641,0.991841468704031,0.523511883968059,302.262117716461,0,0,0,0,0,0,0,0,0,0,0.241584120826006,0,0,0,0,0.129920822977795,0,0.198681354781265,0.120195449519969,0,0.100966449948148,0,0,0,0,0.233753804363138,0,29.5241317987506,99.582380836518,26.6936540018885,0,3.37828455812128,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,1.19707462020309,0.170733605754134,3.40349403895612,1.46729213839588,7.90527086335061,6.44515510624684,4.94484137373346,3.20919209591815,5.05394423527595,6.08350319736575,6.79054828989874,4.68207537349412,6.53056554529667,4.65227298540468,5.71552429539688,6.14186927507734,5.40145817298374,9.06588981767275,7.21274708658547,6.17164654293748,6.56660482789549,5.48403236878838,6.24989591519013,6.21121910741182,6.17686637609238,5.67076715905595,3.94604567156764,6.79020569229309,7.85599180320834,6.8808310512021,6.40279135441163,6.13846564754534,6.04253680625267,5.20847849649082,0,7.25187986180766,10.3138105943183,0,0,0 | ||
|short_description=p1@Cdx2 | |short_description=p1@Cdx2 | ||
}} | }} |
Latest revision as of 18:04, 25 September 2015
Short description: | p1@Cdx2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cdx2_5end |
Coexpression cluster: | MCL_coexpression_mm9:489 |
Association with transcript: | 109bp_to_NM_007673, uc009anz.1_5end |
EntrezGene: | Cdx2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 4.96e-10 | 9 |
epithelial cell of alimentary canal | 4.96e-10 | 9 |
brush border epithelial cell | 2.91e-07 | 6 |
gut absorptive cell | 2.91e-07 | 6 |
enterocyte | 2.91e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
intestine | 1.75e-35 | 31 |
gastrointestinal system | 3.10e-28 | 47 |
mucosa | 1.10e-16 | 15 |
intestinal mucosa | 1.01e-14 | 13 |
wall of intestine | 1.01e-14 | 13 |
gastrointestinal system mucosa | 1.01e-14 | 13 |
organ component layer | 7.91e-13 | 24 |
epithelium of mucosa | 4.96e-10 | 9 |
gastrointestinal system epithelium | 4.96e-10 | 9 |
intestinal epithelium | 4.96e-10 | 9 |
simple columnar epithelium | 9.18e-08 | 11 |