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FFCP PHASE1:Mm9::chr10:127848786..127848813,+: Difference between revisions

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(Created page with "{{FFCP |id=chr10:127848786..127848813,+ |short_description=p3@Rnf41 |description=CAGE_peak_3_at_Rnf41_5end |association_with_transcript=114bp_to_ENSMUST00000096386,ENSMUST...")
 
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{{FFCP
{{FFCP
|id=chr10:127848786..127848813,+
|DHSsupport=NA
|short_description=p3@Rnf41
|DPIdataset=NA
|description=CAGE_peak_3_at_Rnf41_5end
|association_with_transcript=114bp_to_ENSMUST00000096386,ENSMUST00000171342,NM_001164237,NM_026259,uc007hmr.2,uc007hms.2,uc007hmt.2,uc007hmu.2_5end
|EntrezGene=67588
|EntrezGene=67588
|HGNC=
|HGNC=
|TSSclassifier=NA
|UniProt=Q8BH75
|UniProt=Q8BH75
|association_with_transcript=114bp_to_ENSMUST00000096386,ENSMUST00000171342,NM_001164237,NM_026259,uc007hmr.2,uc007hms.2,uc007hmt.2,uc007hmu.2_5end
|cluster_id=chr10:127848786..127848813,+
|description=CAGE_peak_3_at_Rnf41_5end
|id=chr10:127848786..127848813,+
|ontology_enrichment_celltype=CL:0000034!2.71e-08!97;CL:0000117!1.20e-07!23;CL:0000337!1.20e-07!23;CL:0000221!1.33e-07!44;CL:0000133!1.33e-07!44;CL:0002319!1.37e-07!43;CL:0000540!1.40e-07!33;CL:0000047!1.40e-07!33;CL:0000031!1.40e-07!33;CL:0000404!1.40e-07!33;CL:0000144!8.12e-07!121;CL:0000012!8.12e-07!121
|ontology_enrichment_celltype_v019_2=CL:0000034,2.49e-08,97;CL:0000117,1.20e-07,23;CL:0000337,1.20e-07,23;CL:0000221,1.33e-07,44;CL:0000133,1.33e-07,44;CL:0002319,1.37e-07,43;CL:0000540,1.40e-07,33;CL:0000047,1.40e-07,33;CL:0000031,1.40e-07,33;CL:0000404,1.40e-07,33
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,4.47e-19,75;UBERON:0001017,1.00e-18,73;UBERON:0000073,8.32e-17,54;UBERON:0004121,4.84e-16,95;UBERON:0000924,4.84e-16,95;UBERON:0006601,4.84e-16,95;UBERON:0001049,1.33e-15,52;UBERON:0005068,1.33e-15,52;UBERON:0006241,1.33e-15,52;UBERON:0007135,1.33e-15,52;UBERON:0010371,4.60e-14,73;UBERON:0002346,3.40e-13,64;UBERON:0003075,3.40e-13,64;UBERON:0007284,3.40e-13,64;UBERON:0000955,6.80e-13,47;UBERON:0006238,6.80e-13,47;UBERON:0002616,1.51e-12,46;UBERON:0003080,7.44e-12,40;UBERON:0002780,2.84e-11,39;UBERON:0001890,2.84e-11,39;UBERON:0006240,2.84e-11,39;UBERON:0002020,6.46e-11,34;UBERON:0003056,3.89e-09,49;UBERON:0003528,1.57e-08,29;UBERON:0002791,1.57e-08,29;UBERON:0001893,1.57e-08,29
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5413,2.42755823492677,2.72756403893609,1.57053565190418,1.16653475962614,1.24267862617385,5.6369293868419,5.08356256549528,4.13646226142744,2.33341426012857,3.35815541042101,2.19642963138012,2.11243029562357,3.3853140059427,5.03324853243412,4.59009829569411,3.74439008135225,1.89606672376907,3.44632865993279,5.13554785824136,3.37794139742267,2.32734704367726,3.9736270956253,4.32703618271888,3.39685912501528,2.22126189885925,3.88654713940499,3.62974266492626,3.8983152295901,3.17499077413087,3.50630706544707,1.36038230169127,4.66170502085536,12.5599399253266,6.37961542183498,1.35232715822533,1.87682475451182,1.09890974560359,0.857473516316263,2.50786052017682,6.21227026878773,7.82552902062201,8.02053718815155,8.76451229952807,8.90607275701835,6.0431511791176,5.40018000185445,4.05289082901798,7.70342095273148,7.24864436452548,3.84013186061454,4.78829848081237,3.92687293234509,3.16038732188782,4.19226325255965,4.04455718590031,3.11145418922261,2.47242068686673,3.20919209591815,2.52697211763797,3.54871019846336,2.82939512079114,3.27745276144588,2.11283002936069,3.0440798546475,2.85776214769844,3.94006708212509,2.89363830695558,2.06042950401653,2.50238164228475,3.77156177623957,3.01708870470874,2.62279808942053,2.90692833264657,2.91739079287525,2.876896668317,2.92684756596436,2.63069711437843,4.20992752922171,4.48913817326191,3.91495559809775,3.05363895364247,2.86461730218783,2.47898945897546,4.43685205256625,3.74715866906919,3.50897412668113,3.00819475667618,2.29545998482612,3.52946270591225,3.2461496986859
|phase1_expression=5.12476310735341,3.14077866875425,4.54999239389536,4.53696316960245,3.00537437967808,2.68606835059024,2.10251376535973,2.96983643915625,5.77233760821834,7.72412936862578,2.73948749160808,2.47293692885543,1.36960583944965,2.88487327982691,0.333109761815663,3.03712901084739,3.49780939064073,6.46697438984387,6.44437837946972,10.1853516431527,2.21112554392781,6.35462087685666,4.4403964153619,2.87986361028132,3.21172993494038,2.8711598205751,5.59990595006797,4.09395342103189,0.760093677825496,2.01624103807945,3.32595765982957,5.08024538767705,3.69038872550742,0,1.44425809875637,0.166234645358492,0.204169356262369,14.2300754450549,12.5013655123808,7.32933241563318,13.5293242247133,12.9778642142105,18.4493934151838,4.15459499319405,2.02753862439029,5.68994931701213,7.04152209913235,2.61630187656536,4.17403747195497,2.72201858703997,1.39986421625363,5.75010257459886,10.4025215755797,3.62681071005672,4.03312558970957,3.08711323243136,0.85960031981627,4.12537673821954,3.64169629547276,10.0508286061686,5.70448263155561,4.40497891689872,2.66788438833342,8.99899717281399,11.8663963508037,10.6572017241915,6.5912024314049,4.2264013585371,4.56234294157302,2.8351247049655,4.83747411108179,8.85518051651791,10.3808214247258,4.40966877173835,2.68367318851062,3.67687514644008,13.2139057199266,7.40586560894089,10.2916377281683,5.40733779693795,4.84884511092771,7.8137005583514,7.81712397203867,16.3201156909187,12.9878510610289,6.18720029494702,6.69146899755784,9.13357284543973,5.14938114665652,4.00529268565963,4.92769630792852,0.860423876981386,2.03991400112325,0.539703191637817,0,0.448026887097336,1.54488862144927,3.40860645156115,5.19572009205738,2.12003744706204,3.94361575374705,10.2661181931454,2.54805239706646,0,1.5154372870785,1.52015919285059,1.01104889002957,1.25602267690966,5.95557132388495,2.22663208597237,5.37804512975021,2.13125834818499,4.38169444786511,2.41156224884196,2.4693628498498,3.01599819191221,4.6967043869531,1.15679485535929,3.5384422077995,3.07357014900077,3.75430581382669,2.42437626567611,0,4.09893115816166,3.35114730901528,1.27728527604296,3.83408398418945,5.39912457894067,5.71816021828791,10.9347166765521,5.49000723382352,11.0575829859321,7.30062144807561,7.41574826257959,3.94797284663164,6.97637431191358,3.1570202793598,4.47865094196335,6.06534620240819,2.10441855886474,2.73252930221678,2.98872735763515,3.06105620669094,3.61691562805716,3.12967896096108,3.33095672740609,3.46696380870997,3.10444044886819,3.44908788692548,4.34943984385984,3.87092473160687,2.84954452155847,4.72680323683516,4.52727816478817,3.2925141825271,3.98068533636986,2.80885274925294,5.40430604940902,4.83077948972507,3.52113813310353,4.22146907965973,2.16074473753218,3.31442629819294,2.36117078096885,3.70241070929708,1.62773761325285,2.41446061259657,3.03589890154641,1.6455984991348,2.13417703302824,1.62137619091711,1.46199987425332,1.3173006917463,1.74468344388483,6.72927835405207,7.61494131606705,0.330418782983798,0.793351699990633,4.26576501070468,3.94802342162745,3.73715637834071,4.23535401709019,2.2237804384487,2.85338439168839,2.37264530772256,2.14108641141214,2.26201687920243,3.18330355265841,3.50935356814416,0.898819408654221,1.29682829924817,2.58883655230677,5.31070122668629,3.99869794134051,2.25415471346161,2.44381593414377,4.65485969202302,6.10181633045771,4.61626721007078,2.06654207171443,1.72698600625512,3.57851775373222,0.296452627087149,1.50160595144485,0.982794975566015,2.02375901146368,1.82574109249653,2.17059443777175,1.01850340712568,0.863088412352432,3.72911021582581,1.64736847912849,4.31304619582064,1.86070473834252,0.624075346229121,1.01031551178845,0.358794827043824,0,2.21703828199926,3.22135400009824,1.46668478797823,4.2436271443797,3.98973422090454,2.34508760418542,2.61848004974615,3.51240566144038,2.04925687338048,2.87904096543407,4.78364305972461,2.13022309130459,2.24490476425664,2.02508682014116,9.04747703635634,5.98296252200581,5.90117127622843,6.62248191131358,7.86697890940181,7.97039468826982,4.75411341592359,1.26235463602186,5.04813151066011,3.12350995437311,7.75524231838076,2.86762557543062,4.01037613348309,2.83076530788832,6.07216052512342,3.21481443702443,4.34816555741176,5.78378369559253,2.2710413633323,6.7664929393557,6.35259141478947,2.8044920905331,0,3.39892890616974,2.41858845571801,2.07465587731488,2.06711325016541,3.68922177532713,3.6179961043551,2.54473610634254,3.20847640546249,2.52829406348653,1.05418608574999,1.03135543248187,5.10659408630682,4.68158844481407,4.65691261617916,5.78709994585299,4.96552654198366,6.59964625127661,5.10101963866575,13.3964577610424,4.92810586933792,2.96564899209348,2.8668691747145,1.31909002353184,4.84393280087717,4.1012788951146,4.77489376012546,3.93938159388147,3.20628920292836,8.34413859047294,4.27177201994632,4.95328483111734,2.77791791054568,2.63715839806567,3.2806614653046,3.43167259809784,6.96911562974807,5.03825228365169,9.25939824489639,0.954670618015114,3.79603192297362,2.23651413839534,1.62008011232702,2.71814784818809,2.62035076495413,2.42755823492677,2.72756403893609,1.57053565190418,1.16653475962614,1.24267862617385,5.6369293868419,5.08356256549528,4.13646226142744,2.33341426012857,3.35815541042101,2.19642963138012,2.11243029562357,3.3853140059427,5.03324853243412,4.59009829569411,3.74439008135225,1.89606672376907,3.44632865993279,5.13554785824136,3.37794139742267,2.32734704367726,3.9736270956253,4.32703618271888,3.39685912501528,2.22126189885925,3.88654713940499,3.62974266492626,3.8983152295901,3.17499077413087,3.50630706544707,1.36038230169127,4.66170502085536,12.5599399253266,6.37961542183498,1.35232715822533,1.87682475451182,1.09890974560359,0.857473516316263,2.50786052017682,6.21227026878773,7.82552902062201,8.02053718815155,8.76451229952807,8.90607275701835,6.0431511791176,5.40018000185445,4.05289082901798,7.70342095273148,7.24864436452548,3.84013186061454,4.78829848081237,3.92687293234509,3.16038732188782,4.19226325255965,4.04455718590031,3.11145418922261,2.47242068686673,3.20919209591815,2.52697211763797,3.54871019846336,2.82939512079114,3.27745276144588,2.11283002936069,3.0440798546475,2.85776214769844,3.94006708212509,2.89363830695558,2.06042950401653,2.50238164228475,3.77156177623957,3.01708870470874,2.62279808942053,2.90692833264657,2.91739079287525,2.876896668317,2.92684756596436,2.63069711437843,4.20992752922171,4.48913817326191,3.91495559809775,3.05363895364247,2.86461730218783,2.47898945897546,4.43685205256625,3.74715866906919,3.50897412668113,3.00819475667618,2.29545998482612,3.52946270591225,3.2461496986859
|short_description=p3@Rnf41
}}
}}

Latest revision as of 18:56, 25 September 2015

Short description:p3@Rnf41
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Rnf41_5end
Coexpression cluster:NA
Association with transcript: 114bp_to_ENSMUST00000096386, ENSMUST00000171342, NM_001164237, NM_026259, uc007hmr.2, uc007hms.2, uc007hmt.2, uc007hmu.2_5end
EntrezGene:Rnf41
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p3@Rnf41

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.12
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I53.14
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I64.55
CD326+ enterocyte, pool1.CNhs13542.11848-124I34.54
CD326+ enterocyte, pool2.CNhs13197.11849-124I43.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I72.69
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I82.10
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E92.97
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E75.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F27.72
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E62.74
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F12.47
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E41.37
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E82.88
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.33
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A33.04
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A53.50
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.47
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A46.44
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A610.19
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A32.21
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H26.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.44
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D12.88
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.21
GP2+ M cell, pool1.CNhs13228.11845-124H92.87
GP2+ M cell, pool2.CNhs13231.11846-124I15.60
GP2+ M cell, pool3.CNhs13240.11847-124I24.09
Ileum epithelium, pool1.CNhs13199.10252-104B90.76
Ileum epithelium, pool2.CNhs13232.10253-104C12.02
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.33
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I35.08
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G63.69
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.44
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.17
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G814.23
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H112.50
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H37.33
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G913.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H212.98
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H418.45
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D84.15
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D92.03
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B35.69
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B77.04
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C22.62
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B84.17
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.72
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.40
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A210.40
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I93.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A14.03
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C13.09
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.13
Mouse Granule cells, donor1.CNhs12131.11713-123C33.64
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C64.40
Mouse Meningeal cells, donor3.CNhs12109.11639-122D12.67
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C79.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D210.66
Mouse Microglia, donor1.CNhs12629.11718-123C86.59
Mouse Microglia, donor2.CNhs12634.11736-123E84.23
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.56
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.84
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.84
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D510.38
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D24.41
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.68
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D313.21
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D710.29
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D45.41
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F44.85
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.81
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E47.82
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I612.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D66.19
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F66.69
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E19.13
Mouse Schwann, donor1.CNhs12507.11728-123D95.15
Mouse Schwann, donor2.CNhs12573.11746-123F94.01
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G34.93
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.86
Mouse hepatocyte, donor1.CNhs13078.11714-123C42.04
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A71.54
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I73.41
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E35.20
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I82.12
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G63.94
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H110.27
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I82.55
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G11.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G21.52
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G31.01
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B61.26
accessory axillary lymph node, adult.CNhs10475.1063-29H95.96
adrenal gland, adult.CNhs10508.49-24D72.23
adrenal gland, embryo E14.CNhs11038.406-44C55.38
adrenal gland, embryo E16.CNhs11004.1254-43D62.13
adrenal gland, embryo E17.CNhs11043.1263-45I14.38
adrenal gland, embryo E18.CNhs11026.1262-18F52.41
adrenal gland, neonate N00.CNhs11191.1311-23C12.47
adrenal gland, neonate N25.CNhs11223.1377-27I33.02
amnion, adult pregnant day17.5.CNhs10488.583-22A84.70
aorta, adult.CNhs10498.46-23H11.16
bone (os femoris), adult.CNhs10483.56-12G23.54
bone (os femoris), neonate N02.CNhs11227.1985-43F53.07
bone (os femoris), neonate N16.CNhs11225.1525-43A63.75
bone (os femoris), neonate N20.CNhs11195.1350-25C32.42
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B24.10
cerebellum, neonate N30.CNhs11135.1395-42I23.35
colon, adult.CNhs10468.36-18H71.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C73.83
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D15.40
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D45.72
corpora quadrigemina, adult.CNhs10501.16-22A410.93
corpus striatum, adult.CNhs10487.19-21D85.49
corpus striatum, neonate N00.CNhs11226.630-43F111.06
cortex, adult.CNhs10473.12-14D57.30
cortex, neonate N30.CNhs11107.1392-42F27.42
diencephalon, adult.CNhs10482.20-12F23.95
diencephalon, neonate N30.CNhs11201.1388-42B26.98
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B13.16
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A24.48
epididymis, adult.CNhs10490.58-23B26.07
eyeball, adult.CNhs10484.31-12G42.10
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E22.99
eyeball, embryo E15.CNhs10593.426-16C93.06
eyeball, embryo E17.CNhs11023.1261-18D43.62
eyeball, neonate N00.CNhs11207.633-15C63.13
eyeball, neonate N01.CNhs11140.1532-43E73.33
eyeball, neonate N02.CNhs11205.1551-44G83.47
eyeball, neonate N16.CNhs11188.777-19A23.10
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H24.35
forelimb, embryo E13.CNhs10589.384-1E23.87
forelimb, embryo E14.CNhs10577.413-26A82.85
forelimb, embryo E15.CNhs11007.437-20E74.73
forelimb, embryo E17.CNhs10598.1517-43C44.53
forelimb, embryo E18.CNhs11008.1520-43B53.29
gonad, embryo E13.CNhs11044.1564-45I63.98
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C82.81
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D25.40
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D54.83
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I92.16
heart, embryo E14.CNhs10597.403-26D43.31
heart, embryo E15.CNhs11017.431-16C82.36
heart, embryo E16.CNhs11021.457-17C63.70
heart, embryo E17.CNhs11025.479-18E51.63
heart, embryo E18.CNhs11030.1283-20G32.41
heart, neonate N00.CNhs11213.639-21E33.04
heart, neonate N03.CNhs11221.1349-25I21.65
heart, neonate N10.CNhs11118.749-24G12.13
heart, neonate N16.CNhs11209.782-15G11.62
heart, neonate N20.CNhs11127.821-26I61.46
heart, neonate N25.CNhs11196.1351-25D31.32
heart, neonate N30.CNhs11202.1390-42D21.74
hippocampus, adult.CNhs10478.13-16E86.73
hippocampus, neonate N00.CNhs11228.627-43G17.61
intestinal mucosa, adult.CNhs10506.860-29I30.33
intestine, adult.CNhs10496.178-9A30.79
intestine, embryo E12.CNhs11019.1251-16I54.27
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D83.74
intestine, embryo E16.CNhs10585.463-22H44.24
intestine, embryo E17.CNhs10582.482-18D32.22
intestine, embryo E18.CNhs10526.1289-20F72.85
intestine, neonate N00.CNhs11126.644-26D12.37
intestine, neonate N01.CNhs11192.1322-23E92.14
intestine, neonate N06.CNhs11102.688-20B82.26
intestine, neonate N07.CNhs11095.720-20F23.18
intestine, neonate N10.CNhs11098.755-23A53.51
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E31.30
intestine, neonate N30.CNhs11131.1384-42G12.59
kidney, embryo E14.CNhs10606.411-4I95.31
kidney, embryo E15.CNhs10997.434-16F84.00
kidney, embryo E16.CNhs10584.464-22A52.25
kidney, embryo E17.CNhs11028.483-18I22.44
kidney, embryo E18.CNhs11001.1288-20C74.65
kidney, neonate N00.CNhs11214.646-21G76.10
kidney, neonate N10.CNhs11206.758-6D54.62
kidney, neonate N20.CNhs11113.832-19I12.07
kidney, neonate N25.CNhs11122.1353-25F31.73
kidney, neonate N30.CNhs11203.1385-42H13.58
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F81.50
liver, embryo E13.CNhs10524.378-3H60.98
liver, embryo E14.CNhs10594.409-16E12.02
liver, embryo E15.CNhs10520.433-16D71.83
liver, embryo E16.CNhs10523.462-17F52.17
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G40.86
liver, neonate N00.CNhs11117.641-24F43.73
liver, neonate N03.CNhs11123.1345-25G21.65
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H21.86
liver, neonate N10.CNhs11115.751-24B90.62
liver, neonate N20.CNhs11220.823-25A31.01
liver, neonate N25.CNhs11198.1368-26H10.36
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B12.22
lung, embryo E12.CNhs10522.354-16G23.22
lung, embryo E14.CNhs10604.404-26F81.47
lung, embryo E15.CNhs11020.432-17C54.24
lung, embryo E16.CNhs10998.458-17B63.99
lung, embryo E17.CNhs10605.480-44A62.35
lung, embryo E18.CNhs10583.1287-20I62.62
lung, neonate N00.CNhs11224.640-42C63.51
lung, neonate N06.CNhs11212.683-20E52.05
lung, neonate N07.CNhs11111.715-19A32.88
lung, neonate N10.CNhs11219.750-23E64.78
lung, neonate N20.CNhs11109.822-18A42.13
lung, neonate N25.CNhs11119.1359-25C72.24
lung, neonate N30.CNhs11133.1394-42H22.03
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A19.05
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B65.90
mammary gland, adult pregnant day19.CNhs10476.588-5H26.62
medulla oblongata, adult.CNhs10477.17-12C27.87
medulla oblongata, neonate N30.CNhs11200.1396-42A37.97
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C74.75
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C21.26
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E23.12
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.76
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D72.87
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D84.01
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D92.83
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D46.07
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D53.21
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D64.35
olfactory brain, adult.CNhs10489.18-22I95.78
ovary, adult.CNhs10507.91-2I72.27
ovary, embryo E18.CNhs11040.505-44H76.77
ovary, neonate N00.CNhs11217.1299-22I46.35
oviduct, adult pregnant day01.CNhs10500.988-6G62.80
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F43.40
pancreas, embryo E15.CNhs11042.1556-45F22.42
pancreas, embryo E16.CNhs11003.460-26E52.07
pancreas, embryo E17.CNhs10599.1558-45G32.07
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D72.54
pancreas, neonate N02.CNhs11139.1539-43D83.21
pancreas, neonate N16.CNhs11136.787-43B62.53
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H51.03
pituitary gland, adult.CNhs10493.21-1G85.11
pituitary gland, embryo E12.CNhs11018.346-16E64.68
pituitary gland, embryo E13.CNhs11009.370-44C74.66
pituitary gland, embryo E14.CNhs11037.398-44A55.79
pituitary gland, embryo E15.CNhs10592.427-16B94.97
pituitary gland, embryo E16.CNhs11036.449-43F66.60
pituitary gland, embryo E17.CNhs11039.1265-44F55.10
pituitary gland, neonate N00.CNhs11190.1308-22E913.40
placenta, adult pregnant day10.CNhs10472.539-13I74.93
placenta, adult pregnant day17.CNhs10464.577-18G32.97
prostate, adult.CNhs10470.859-1F82.87
skin, adult.CNhs10492.30-1C31.32
skin, neonate N00.CNhs11124.650-25G44.84
skin, neonate N03.CNhs11215.662-22H34.10
skin, neonate N06.CNhs11097.693-20I54.77
skin, neonate N10.CNhs11108.762-6C43.94
small intestine, neonate N16.CNhs11114.790-21I13.21
spinal cord, adult.CNhs10505.24-13C98.34
spleen, adult.CNhs10465.25-2G24.27
spleen, embryo E16.CNhs11035.461-43C14.95
spleen, embryo E18.CNhs11011.1271-21F22.78
spleen, neonate N10.CNhs11116.752-24D12.64
spleen, neonate N20.CNhs11112.824-19H13.28
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.97
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C95.04
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.26
stomach, adult.CNhs10503.33-1H60.95
stomach, embryo E12.CNhs10588.356-43E33.80
stomach, embryo E15.CNhs10603.1252-16G82.24
stomach, embryo E16.CNhs11022.459-17D41.62
stomach, embryo E17.CNhs11006.1035-18D52.72
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B82.43
stomach, neonate N07.CNhs11210.718-18A92.73
stomach, neonate N25.CNhs11104.1355-25E41.57
stomach, neonate N30.CNhs11134.1386-42I11.17
submandibular gland, adult.CNhs10469.59-29C11.24
testis, adult.CNhs10504.57-7G55.64
testis, embryo E13.CNhs11031.389-23F55.08
testis, embryo E15.CNhs11034.443-27C54.14
testis, embryo E16.CNhs11033.470-26G52.33
testis, embryo E17.CNhs11029.486-18I53.36
testis, embryo E18.CNhs11027.503-18G52.20
testis, neonate N00.CNhs11189.1300-22B72.11
testis, neonate N07.CNhs11222.726-26I43.39
testis, neonate N10.CNhs11204.763-44D95.03
testis, neonate N20.CNhs11110.839-18H34.59
testis, neonate N30.CNhs11130.1391-42E23.74
thymus, adult.CNhs10471.38-12B51.90
thymus, embryo E14.CNhs11041.402-44I43.45
thymus, embryo E15.CNhs11005.430-45I25.14
thymus, embryo E16.CNhs11002.456-26C53.38
thymus, embryo E17.CNhs10581.478-18C12.33
thymus, embryo E18.CNhs10595.1273-19G43.97
thymus, neonate N02.CNhs11181.1541-43F84.33
thymus, neonate N03.CNhs11137.2104-43C73.40
thymus, neonate N06.CNhs11197.681-26C42.22
thymus, neonate N07.CNhs11211.713-19D33.89
thymus, neonate N10.CNhs11194.748-24E43.63
thymus, neonate N20.CNhs11186.820-7A23.90
thymus, neonate N25.CNhs11125.1362-25G73.17
thymus, neonate N30.CNhs11132.1393-42G23.51
tongue, adult.CNhs10499.32-1B41.36
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H34.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F712.56
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G56.38
urinary bladder, adult.CNhs10481.879-12E41.35
uterus, adult pregnant day19.CNhs10497.590-15F51.88
uterus, adult.CNhs10509.92-27E51.10
vagina, adult.CNhs10502.89-27D50.86
vesicular gland, adult.CNhs10491.51-27F82.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A16.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A27.83
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A38.02
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D78.76
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.91
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A56.04
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A65.40
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.05
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A87.70
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A97.25
whole body, embryo E11.CNhs11014.324-5I83.84
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H23.93
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B14.19
whole body, embryo E16.CNhs10514.453-14F24.04
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G52.53
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G52.83
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G53.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G52.11
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.04
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.94
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.50
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G53.77
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.62
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G52.91
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.92
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.88
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G52.93
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G52.63
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.21
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G53.05
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G52.48
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I53.75
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C23.01
whole body, neonate N01.CNhs10576.659-23C62.30
whole body, neonate N06.CNhs10515.692-21D13.53
whole body, neonate N10.CNhs10518.761-6B43.25





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
stem cell2.49e-0897
CNS neuron (sensu Vertebrata)1.20e-0723
neuroblast (sensu Vertebrata)1.20e-0723
ectodermal cell1.33e-0744
neurectodermal cell1.33e-0744
neural cell1.37e-0743
neuron1.40e-0733
neuronal stem cell1.40e-0733
neuroblast1.40e-0733
electrically signaling cell1.40e-0733

Uber anatomy
Ontology termp-valuen
nervous system4.47e-1975
central nervous system1.00e-1873
regional part of nervous system8.32e-1754
ectoderm-derived structure4.84e-1695
ectoderm4.84e-1695
presumptive ectoderm4.84e-1695
neural tube1.33e-1552
neural rod1.33e-1552
future spinal cord1.33e-1552
neural keel1.33e-1552
ecto-epithelium4.60e-1473
neurectoderm3.40e-1364
neural plate3.40e-1364
presumptive neural plate3.40e-1364
brain6.80e-1347
future brain6.80e-1347
regional part of brain1.51e-1246
anterior neural tube7.44e-1240
regional part of forebrain2.84e-1139
forebrain2.84e-1139
future forebrain2.84e-1139
gray matter6.46e-1134
pre-chordal neural plate3.89e-0949
brain grey matter1.57e-0829
regional part of telencephalon1.57e-0829
telencephalon1.57e-0829
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