FFCP PHASE1:Mm9::chr2:132771660..132771670,-: Difference between revisions
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m (moved FFCP PHASE1 mm9::chr2:132771660..132771670,- to FFCP PHASE1:Mm9::chr2:132771660..132771670,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=241639 | |EntrezGene=241639 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1051 | |||
|TSSclassifier=NA | |||
|UniProt=P59113 | |UniProt=P59113 | ||
|association_with_transcript=-18bp_to_ENSMUST00000038280_5end | |||
|cluster_id=chr2:132771660..132771670,- | |||
|description=CAGE_peak_11_at_Fermt1_5end | |||
|id=chr2:132771660..132771670,- | |||
|ontology_enrichment_celltype=CL:0002076!1.40e-11!15;CL:0002563!1.97e-11!9;CL:0002251!1.97e-11!9;CL:0000066!1.40e-10!25;CL:0000223!2.77e-09!20;CL:0000239!4.54e-08!6;CL:0000677!4.54e-08!6;CL:0000212!4.54e-08!6;CL:0000584!4.54e-08!6;CL:0000075!9.57e-07!7 | |||
|ontology_enrichment_celltype_v019_2=CL:0002076,2.80e-24,15;CL:0002563,5.21e-18,9;CL:0002251,5.21e-18,9;CL:0000223,6.42e-18,20;CL:0000066,2.65e-17,25;CL:0000068,1.54e-15,3;CL:0002202,1.54e-15,3;CL:0000069,1.54e-15,3;CL:0002632,1.54e-15,3;CL:0002368,1.54e-15,3;CL:0000307,1.54e-15,3;CL:0000377,1.54e-15,3;CL:0000239,8.38e-13,6;CL:0000677,8.38e-13,6;CL:0000584,8.38e-13,6;CL:0000075,5.32e-11,7;CL:0002250,8.97e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!3.38e-27!59;UBERON:0000160!4.05e-26!43;UBERON:0000344!2.58e-18!15;UBERON:0001242!8.40e-16!13;UBERON:0000060!8.40e-16!13;UBERON:0001262!8.40e-16!13;UBERON:0004786!8.40e-16!13;UBERON:0001007!1.22e-13!128;UBERON:0001555!1.22e-13!128;UBERON:0007026!1.22e-13!128;UBERON:0004119!3.35e-13!130;UBERON:0000925!3.35e-13!130;UBERON:0006595!3.35e-13!130;UBERON:0004921!3.66e-12!126;UBERON:0004185!3.66e-12!126;UBERON:0003350!1.97e-11!9;UBERON:0004808!1.97e-11!9;UBERON:0001277!1.97e-11!9;UBERON:0004923!1.21e-09!24;UBERON:0000485!6.61e-09!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.21e-23,15;UBERON:0003350,5.21e-18,9;UBERON:0004808,5.21e-18,9;UBERON:0001277,5.21e-18,9;UBERON:0001242,1.21e-16,13;UBERON:0001262,1.21e-16,13;UBERON:0004786,1.21e-16,13;UBERON:0003126,1.54e-15,3;UBERON:0001005,1.54e-15,3;UBERON:0007196,1.54e-15,3;UBERON:0001558,1.54e-15,3;UBERON:0000485,1.15e-14,11;UBERON:0004923,2.40e-14,24;UBERON:0000160,1.12e-13,31;UBERON:0001155,1.44e-10,2;UBERON:0000059,1.44e-10,2;UBERON:0005409,2.35e-10,47;UBERON:0001962,3.06e-10,2;UBERON:0001961,3.06e-10,2;UBERON:0001744,3.06e-10,2;UBERON:0001007,3.05e-09,116;UBERON:0001555,3.05e-09,116;UBERON:0007026,3.05e-09,116;UBERON:0004119,4.85e-09,118;UBERON:0000925,4.85e-09,118;UBERON:0006595,4.85e-09,118;UBERON:0002465,4.17e-07,3;UBERON:0004921,5.58e-07,114 | |||
|phase1_expression=0,1.39590163055744,1.81999695755814,0.30246421130683,0.500895729946347,2.18243053485457,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,1.75991665072747,1.60586496747019,0.57423196411502,0.430761996159075,1.29282739611533,0.950117097281869,0.504060259519861,1.55211357458713,0,0,0,0.866554859253824,1.16364251750945,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46385665617943,3.29367825117628,2.52762222507392,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.29911349687732,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.528901133327089,0,0,0.257734922644187,0.403367049246685,0.444756087689741,0.380451252225118,0.949058123089023,0.494096864172033,0.502670417600539,0.596869416123452,0.974820435595601,3.59527763461689,0.432276099749388,0.597423819763102,0,0,0,0,0.193952487167626,0,0.379419222745544,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.35613120733451,0,0.659880491890142,0,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0.339956859987711,0,0.138199973804424,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.539457385539283,0.578574190077352,0,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0.167884616364078,0,0.375364950902364,4.76194223094889,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,1.39590163055744,1.81999695755814,0.30246421130683,0.500895729946347,2.18243053485457,2.56973904655078,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,1.75991665072747,1.60586496747019,0.57423196411502,0.430761996159075,1.29282739611533,0.950117097281869,0.504060259519861,1.55211357458713,0,0,0,0.866554859253824,1.16364251750945,1.42918549383658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869593466105033,0,0,0,0,0,0,0,0,0,0,0,0,0,3.46385665617943,3.29367825117628,2.52762222507392,0.45673551887624,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.86391761218122,0,0,2.29911349687732,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0.258703370739016,0.215567992932842,0,0,0,0,0,0,0.59710280045548,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.991256348951394,0.528901133327089,0,0,0.257734922644187,0.403367049246685,0.444756087689741,0.380451252225118,0.949058123089023,0.494096864172033,0.502670417600539,0.596869416123452,0.974820435595601,3.59527763461689,0.432276099749388,0.597423819763102,0,0,0,0,0.193952487167626,0,0.379419222745544,0.147610147979602,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,1.43768206527355,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567760340833074,0.35613120733451,0,0.659880491890142,0,0.485561272309963,0,0,0.295301892880773,0.307435147943927,0,0,0.356497378384721,0.316036757935816,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161464426695906,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0.339956859987711,0,0.138199973804424,0.954670618015114,0,0.203319467126849,0.216010681643603,0.209088296014469,0.218362563746178,0.539457385539283,0.578574190077352,0,1.42576470620972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.358053391334963,0,0,0,0,0,0.100826185136841,0,0,0,0,0,0,0.167884616364078,0,0.375364950902364,4.76194223094889,0.857473516316263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0.412085900803307,0,0,0,0,0,0,0,0,0,0,0,0.118635018124174,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@Fermt1 | |||
}} | }} |
Latest revision as of 19:02, 25 September 2015
Short description: | p11@Fermt1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_11_at_Fermt1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1051 |
Association with transcript: | -18bp_to_ENSMUST00000038280_5end |
EntrezGene: | Fermt1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 2.80e-24 | 15 |
intestinal epithelial cell | 5.21e-18 | 9 |
epithelial cell of alimentary canal | 5.21e-18 | 9 |
endodermal cell | 6.42e-18 | 20 |
epithelial cell | 2.65e-17 | 25 |
duct epithelial cell | 1.54e-15 | 3 |
epithelial cell of tracheobronchial tree | 1.54e-15 | 3 |
branched duct epithelial cell | 1.54e-15 | 3 |
epithelial cell of lower respiratory tract | 1.54e-15 | 3 |
respiratory epithelial cell | 1.54e-15 | 3 |
tracheal epithelial cell | 1.54e-15 | 3 |
tracheoblast | 1.54e-15 | 3 |
brush border epithelial cell | 8.38e-13 | 6 |
gut absorptive cell | 8.38e-13 | 6 |
enterocyte | 8.38e-13 | 6 |
columnar/cuboidal epithelial cell | 5.32e-11 | 7 |
intestinal crypt stem cell | 8.97e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.21e-23 | 15 |
epithelium of mucosa | 5.21e-18 | 9 |
gastrointestinal system epithelium | 5.21e-18 | 9 |
intestinal epithelium | 5.21e-18 | 9 |
intestinal mucosa | 1.21e-16 | 13 |
wall of intestine | 1.21e-16 | 13 |
gastrointestinal system mucosa | 1.21e-16 | 13 |
trachea | 1.54e-15 | 3 |
respiratory airway | 1.54e-15 | 3 |
tracheobronchial tree | 1.54e-15 | 3 |
lower respiratory tract | 1.54e-15 | 3 |
simple columnar epithelium | 1.15e-14 | 11 |
organ component layer | 2.40e-14 | 24 |
intestine | 1.12e-13 | 31 |
colon | 1.44e-10 | 2 |
large intestine | 1.44e-10 | 2 |
gastrointestinal system | 2.35e-10 | 47 |
gut-associated lymphoid tissue | 3.06e-10 | 2 |
mucosa-associated lymphoid tissue | 3.06e-10 | 2 |
lymphoid tissue | 3.06e-10 | 2 |
digestive system | 3.05e-09 | 116 |
digestive tract | 3.05e-09 | 116 |
primitive gut | 3.05e-09 | 116 |
endoderm-derived structure | 4.85e-09 | 118 |
endoderm | 4.85e-09 | 118 |
presumptive endoderm | 4.85e-09 | 118 |
lymphoid system | 4.17e-07 | 3 |
subdivision of digestive tract | 5.58e-07 | 114 |