FFCP PHASE1:Mm9::chr10:128241409..128241430,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr10:128241409..128241430,- to FFCP PHASE1:Mm9::chr10:128241409..128241430,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=73827 | |EntrezGene=73827 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CFU0 | |UniProt=Q8CFU0 | ||
|association_with_transcript=0bp_to_ENSMUST00000051011,NM_178066,uc007hoi.1_5end | |||
|cluster_id=chr10:128241409..128241430,- | |||
|description=CAGE_peak_5_at_Tmem198b_5end | |||
|id=chr10:128241409..128241430,- | |||
|ontology_enrichment_celltype=CL:0000221!9.94e-15!44;CL:0000133!9.94e-15!44;CL:0002319!1.14e-14!43;CL:0000055!1.01e-13!50;CL:0000540!3.97e-09!33;CL:0000047!3.97e-09!33;CL:0000031!3.97e-09!33;CL:0000404!3.97e-09!33;CL:0000393!4.39e-09!39;CL:0000211!4.39e-09!39;CL:0002321!2.91e-08!70;CL:0000220!2.91e-08!70;CL:0000107!5.96e-08!9;CL:0000333!3.44e-07!10;CL:0000095!3.44e-07!10;CL:0000243!3.44e-07!10;CL:0000123!3.44e-07!10;CL:0000125!3.44e-07!10;CL:0000030!3.44e-07!10;CL:0000339!3.44e-07!10 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,3.98e-20,43;CL:0000221,1.61e-19,44;CL:0000133,1.61e-19,44;CL:0000107,1.19e-18,9;CL:0002453,3.92e-14,8;CL:0000333,5.52e-14,10;CL:0000095,5.52e-14,10;CL:0000243,5.52e-14,10;CL:0000123,5.52e-14,10;CL:0000125,5.52e-14,10;CL:0000030,5.52e-14,10;CL:0000339,5.52e-14,10;CL:0002321,2.70e-13,70;CL:0000128,1.14e-10,6;CL:0000126,1.14e-10,6;CL:0000127,1.14e-10,6;CL:0000540,7.90e-10,33;CL:0000047,7.90e-10,33;CL:0000031,7.90e-10,33;CL:0000404,7.90e-10,33;CL:0000034,2.99e-09,97;CL:0000393,9.55e-08,39;CL:0000211,9.55e-08,39;CL:0000723,1.08e-07,91;CL:0000048,1.08e-07,91;CL:0000219,9.81e-07,54 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.16e-12!75;UBERON:0001016!1.16e-12!75;UBERON:0004121!1.95e-12!102;UBERON:0000924!1.95e-12!102;UBERON:0006601!1.95e-12!102;UBERON:0001017!9.09e-12!73;UBERON:0005743!9.09e-12!73;UBERON:0000010!7.36e-09!11;UBERON:0002410!5.96e-08!9;UBERON:0002346!1.54e-07!71;UBERON:0003075!1.54e-07!71;UBERON:0007284!1.54e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002410,1.19e-18,9;UBERON:0000010,3.42e-18,11;UBERON:0001016,1.78e-14,75;UBERON:0001017,9.16e-14,73;UBERON:0004121,7.51e-10,95;UBERON:0000924,7.51e-10,95;UBERON:0006601,7.51e-10,95;UBERON:0000011,1.85e-07,3;UBERON:0000013,3.20e-07,3;UBERON:0010313,3.83e-07,3;UBERON:0002342,3.83e-07,3;UBERON:0002005,3.83e-07,3;UBERON:0005428,3.83e-07,3;UBERON:0005062,3.83e-07,3 | |||
|phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.755380907853464,0.202753862439029,0.734187008646726,7.04152209913235,1.52617609466313,1.97717564461025,1.74986909166855,2.09979632438044,2.87505128729943,0,0,0,0.257259436035947,0,0.515672092277442,0.809265843438391,0.528990979272033,0,3.72728985276045,5.33576877666684,0.449949858640699,0,0,4.79360176829448,4.2264013585371,0,0.675029691658453,0.420649922702764,1.71390590642282,1.32521124570968,0.489963196859816,0.575072826109418,1.83843757322004,0,0.383062014255563,0.46081959976873,0.263772575460388,0.182975287204819,1.04182674111352,0.837548997004143,1.12552522006336,0.15279824777681,1.76777151284201,0.996601765593721,0.745597783301202,0.832988126665025,2.72057616384428,0.579728977403356,0,0,0,0,0,0.140444420131752,0.511290967734173,0.779358013808606,1.06001872353102,0.422530259330042,2.56652954828636,5.09610479413291,0,0,0,1.01104889002957,0,0,0.593768556259299,1.21439728736295,0.913396434936424,0,1.05505848386836,1.17588707135705,0,0,0,0,0.647067399789637,0.220841518460394,0,0,0.878342391034642,0,0.255457055208591,2.03685711660064,3.59941638596045,1.77898317902291,0.149790639404823,0,0.125654352112864,0.347648640384553,0,0.20778804455956,0.162241263067758,0.712875546952214,0,0.252722758433675,0.210441855886474,0.650602214813519,0.689706313300419,0.540186389416048,0,0.544291993210623,0.640568601424249,0.281105173679186,0,0.862271971731369,0.567318240503458,0.879755620819744,1.09597866213787,0,0.696504333044333,1.64625709126355,0.199034266818493,2.80885274925294,0.772043721344145,1.13665399758237,0,0.469052119962192,0.540186184383045,0.23674473558521,0.196764231747404,0.308534225774757,0.465067889500816,0.268273401399619,0.350296027101508,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,0.420579897128254,0.308713837137853,0,0,1.2797295032114,0.928946687441754,0,0.201683524623343,0,0.190225626112559,0.474529061544512,0.329397909448022,0,0,0.19496408711912,0,0,0,0.758671603812327,0,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.442655759869801,0.147610147979602,0.156998727841375,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0.509235257325564,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.315270288212382,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.468846746368813,0.491804836130026,0.504941854408746,7.88770548540642,5.85658116444958,11.6328634775711,11.9484398976276,12.0311284004493,12.7384438854975,10.5250782435473,10.5212108848072,8.30104333687699,2.57057053137446,0.567760340833074,0.890328018336276,0.488660878060728,0.659880491890142,0,0.485561272309963,0,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0,0,0,0,1.8006109403131,3.23396709456886,2.35770738534752,2.30542303734956,0.713475270408282,0.329098041204242,0.608929898229199,0.23467170806371,0,0,0.16488625294148,0.322928853391811,0.663442174209714,0.477489376012546,0,0,0.741701208042039,0,0.82554747185289,0.185194527369712,0,0,0.228778173206523,2.20971958992012,1.39951452323658,2.07299960706636,0,0.790839983952838,0.203319467126849,0.540026704109006,0,0.436725127492355,0,0.330613822901344,0.523511883968059,0.129614973291793,0,0,0,0.330916980914195,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0.680191150845634,0,0.179427713218951,0,0.19318959403219,0.93841237725591,0.183151624267265,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.518936737920883,0.798049746802062,0.170733605754134,0.486213434136588,0,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.468207537349412,0.320125762024346,0.402048282689293,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0.70990322463735,0.238436189947321,0.436039249896986,0.376437521661322,0.507687647350059,0.73171189149109,1.05227884575137,0.271608227691724,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.578719832943424,0.499621155875892,0.935726433781634,0.214871054048298,1.14772999241306,0.882365676478062,0.231867835620421 | |phase1_expression=0.320297694209588,0,0,0,0,0,0,0,0,0.234064526321993,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0.22940928106717,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0.755380907853464,0.202753862439029,0.734187008646726,7.04152209913235,1.52617609466313,1.97717564461025,1.74986909166855,2.09979632438044,2.87505128729943,0,0,0,0.257259436035947,0,0.515672092277442,0.809265843438391,0.528990979272033,0,3.72728985276045,5.33576877666684,0.449949858640699,0,0,4.79360176829448,4.2264013585371,0,0.675029691658453,0.420649922702764,1.71390590642282,1.32521124570968,0.489963196859816,0.575072826109418,1.83843757322004,0,0.383062014255563,0.46081959976873,0.263772575460388,0.182975287204819,1.04182674111352,0.837548997004143,1.12552522006336,0.15279824777681,1.76777151284201,0.996601765593721,0.745597783301202,0.832988126665025,2.72057616384428,0.579728977403356,0,0,0,0,0,0.140444420131752,0.511290967734173,0.779358013808606,1.06001872353102,0.422530259330042,2.56652954828636,5.09610479413291,0,0,0,1.01104889002957,0,0,0.593768556259299,1.21439728736295,0.913396434936424,0,1.05505848386836,1.17588707135705,0,0,0,0,0.647067399789637,0.220841518460394,0,0,0.878342391034642,0,0.255457055208591,2.03685711660064,3.59941638596045,1.77898317902291,0.149790639404823,0,0.125654352112864,0.347648640384553,0,0.20778804455956,0.162241263067758,0.712875546952214,0,0.252722758433675,0.210441855886474,0.650602214813519,0.689706313300419,0.540186389416048,0,0.544291993210623,0.640568601424249,0.281105173679186,0,0.862271971731369,0.567318240503458,0.879755620819744,1.09597866213787,0,0.696504333044333,1.64625709126355,0.199034266818493,2.80885274925294,0.772043721344145,1.13665399758237,0,0.469052119962192,0.540186184383045,0.23674473558521,0.196764231747404,0.308534225774757,0.465067889500816,0.268273401399619,0.350296027101508,0,0.164167464079095,0.0810688095458557,0,0.219550115291051,0.134206418760372,0.420579897128254,0.308713837137853,0,0,1.2797295032114,0.928946687441754,0,0.201683524623343,0,0.190225626112559,0.474529061544512,0.329397909448022,0,0,0.19496408711912,0,0,0,0.758671603812327,0,0,0.203651327845314,0.387904974335251,0.0701358198903186,0.442655759869801,0.147610147979602,0.156998727841375,0,0,0,0.196558995113203,0.224862112384854,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0.184753190166605,0.37898282354097,0.162964976442026,0.509235257325564,0.234690248288502,0.167506257441816,0.476087281772027,0.195133647857799,0.315270288212382,0,0,0,0,0.144649058581512,0,0,0,0,0.481651769963376,0.468846746368813,0.491804836130026,0.504941854408746,7.88770548540642,5.85658116444958,11.6328634775711,11.9484398976276,12.0311284004493,12.7384438854975,10.5250782435473,10.5212108848072,8.30104333687699,2.57057053137446,0.567760340833074,0.890328018336276,0.488660878060728,0.659880491890142,0,0.485561272309963,0,0.188605079755898,0,0.614870295887855,0,0.363533729477506,0.356497378384721,0,0,0,0,1.8006109403131,3.23396709456886,2.35770738534752,2.30542303734956,0.713475270408282,0.329098041204242,0.608929898229199,0.23467170806371,0,0,0.16488625294148,0.322928853391811,0.663442174209714,0.477489376012546,0,0,0.741701208042039,0,0.82554747185289,0.185194527369712,0,0,0.228778173206523,2.20971958992012,1.39951452323658,2.07299960706636,0,0.790839983952838,0.203319467126849,0.540026704109006,0,0.436725127492355,0,0.330613822901344,0.523511883968059,0.129614973291793,0,0,0,0.330916980914195,0,0.129159823477731,0.168956125490778,0,0.13020438484395,0,0,0,0,0.202725215290164,0.102710957164827,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0.0974578807397524,0,0,0.680191150845634,0,0.179427713218951,0,0.19318959403219,0.93841237725591,0.183151624267265,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0.171853182343688,0,0,0,0.45032120322422,0,0,0.518936737920883,0.798049746802062,0.170733605754134,0.486213434136588,0,0.183843508450014,0.666740183404846,0.206035057238894,0.320919209591815,0.252697211763798,0,0.188626341386076,0.468207537349412,0.320125762024346,0.402048282689293,0,0.231768651889711,0.192909220463705,0,0.294397840268795,0.342869252385415,0.70990322463735,0.238436189947321,0.436039249896986,0.376437521661322,0.507687647350059,0.73171189149109,1.05227884575137,0.271608227691724,0,0.118635018124174,0.197008964751127,0.409231043169689,0.154936841185966,0.578719832943424,0.499621155875892,0.935726433781634,0.214871054048298,1.14772999241306,0.882365676478062,0.231867835620421 | ||
|short_description=p5@Tmem198b | |||
}} | }} |
Latest revision as of 19:23, 25 September 2015
Short description: | p5@Tmem198b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_5_at_Tmem198b_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | 0bp_to_ENSMUST00000051011, NM_178066, uc007hoi.1_5end |
EntrezGene: | Tmem198b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 3.98e-20 | 43 |
ectodermal cell | 1.61e-19 | 44 |
neurectodermal cell | 1.61e-19 | 44 |
autonomic neuron | 1.19e-18 | 9 |
oligodendrocyte precursor cell | 3.92e-14 | 8 |
migratory neural crest cell | 5.52e-14 | 10 |
neuron associated cell | 5.52e-14 | 10 |
glial cell (sensu Vertebrata) | 5.52e-14 | 10 |
neuron associated cell (sensu Vertebrata) | 5.52e-14 | 10 |
glial cell | 5.52e-14 | 10 |
glioblast | 5.52e-14 | 10 |
glioblast (sensu Vertebrata) | 5.52e-14 | 10 |
embryonic cell | 2.70e-13 | 70 |
oligodendrocyte | 1.14e-10 | 6 |
macroglial cell | 1.14e-10 | 6 |
astrocyte | 1.14e-10 | 6 |
neuron | 7.90e-10 | 33 |
neuronal stem cell | 7.90e-10 | 33 |
neuroblast | 7.90e-10 | 33 |
electrically signaling cell | 7.90e-10 | 33 |
stem cell | 2.99e-09 | 97 |
electrically responsive cell | 9.55e-08 | 39 |
electrically active cell | 9.55e-08 | 39 |
somatic stem cell | 1.08e-07 | 91 |
multi fate stem cell | 1.08e-07 | 91 |
motile cell | 9.81e-07 | 54 |
Ontology term | p-value | n |
---|---|---|
autonomic nervous system | 1.19e-18 | 9 |
peripheral nervous system | 3.42e-18 | 11 |
nervous system | 1.78e-14 | 75 |
central nervous system | 9.16e-14 | 73 |
ectoderm-derived structure | 7.51e-10 | 95 |
ectoderm | 7.51e-10 | 95 |
presumptive ectoderm | 7.51e-10 | 95 |
parasympathetic nervous system | 1.85e-07 | 3 |
sympathetic nervous system | 3.20e-07 | 3 |
neural crest-derived structure | 3.83e-07 | 3 |
neural crest | 3.83e-07 | 3 |
enteric nervous system | 3.83e-07 | 3 |
vagal neural crest | 3.83e-07 | 3 |
neural fold | 3.83e-07 | 3 |