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FFCP PHASE1:Mm9::chr14:28051204..28051232,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=71704
|EntrezGene=71704
|HGNC=
|HGNC=
|MCL_coexpression_id=2898
|TSSclassifier=NA
|UniProt=Q91X46
|UniProt=Q91X46
|association_with_transcript=0bp_to_ENSMUST00000049206,NM_027871,uc007stp.1_5end
|association_with_transcript=0bp_to_ENSMUST00000049206,NM_027871,uc007stp.1_5end
|cluster_id=chr14:28051204..28051232,+
|description=CAGE_peak_2_at_Arhgef3_5end
|description=CAGE_peak_2_at_Arhgef3_5end
|id=chr14:28051204..28051232,+
|id=chr14:28051204..28051232,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=CL:0000791,8.95e-07,9;CL:0000789,8.95e-07,9;CL:0002420,8.95e-07,9;CL:0002419,8.95e-07,9;CL:0000790,8.95e-07,9
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001004!9.89e-12!42;UBERON:0000065!1.78e-11!41;UBERON:0000926!2.13e-09!193;UBERON:0004120!2.13e-09!193;UBERON:0006603!2.13e-09!193;UBERON:0003104!9.77e-09!131;UBERON:0009142!9.77e-09!131;UBERON:0004177!1.48e-08!29;UBERON:0005157!1.99e-08!27;UBERON:0006562!4.54e-08!24;UBERON:0001557!4.54e-08!24;UBERON:0001042!4.54e-08!24;UBERON:0008814!4.54e-08!24;UBERON:0009145!4.54e-08!24;UBERON:0003408!6.26e-08!24;UBERON:0002370!1.07e-07!23;UBERON:0000974!1.07e-07!23;UBERON:0004807!1.07e-07!23;UBERON:0005058!1.07e-07!23;UBERON:0003351!1.07e-07!23;UBERON:0009113!1.07e-07!23;UBERON:0003295!1.07e-07!23;UBERON:0009722!1.07e-07!23;UBERON:0005562!1.07e-07!23;UBERON:0007690!1.07e-07!23;UBERON:0000077!1.22e-07!97;UBERON:0002048!1.89e-07!14;UBERON:0000117!1.89e-07!14;UBERON:0000171!1.89e-07!14;UBERON:0000170!1.89e-07!14;UBERON:0005597!1.89e-07!14;UBERON:0000118!1.89e-07!14;UBERON:0001041!2.47e-07!92;UBERON:0005153!2.74e-07!17;UBERON:0003081!6.30e-07!88
|ontology_enrichment_uberon_v019_2=UBERON:0001004,1.89e-12,42;UBERON:0000065,3.47e-12,41;UBERON:0000077,1.80e-09,35;UBERON:0004177,3.31e-09,29;UBERON:0005057,3.31e-09,29;UBERON:0006562,1.00e-08,24;UBERON:0001557,1.00e-08,24;UBERON:0001042,1.00e-08,24;UBERON:0008814,1.00e-08,24;UBERON:0009145,1.00e-08,24;UBERON:0003408,1.41e-08,24;UBERON:0002370,2.44e-08,23;UBERON:0000974,2.44e-08,23;UBERON:0004807,2.44e-08,23;UBERON:0005058,2.44e-08,23;UBERON:0003351,2.44e-08,23;UBERON:0009113,2.44e-08,23;UBERON:0003295,2.44e-08,23;UBERON:0009722,2.44e-08,23;UBERON:0005562,2.44e-08,23;UBERON:0007690,2.44e-08,23;UBERON:0001041,1.46e-07,80;UBERON:0002048,2.69e-07,14;UBERON:0000117,2.69e-07,14;UBERON:0000171,2.69e-07,14;UBERON:0000170,2.69e-07,14;UBERON:0005597,2.69e-07,14;UBERON:0000118,2.69e-07,14;UBERON:0005153,3.64e-07,17;UBERON:0003081,7.24e-07,87
|phase1_expression=0,0,0,0,0,0,0,91.2901896731944,40.4063632575284,49.8557441065846,10.9579499664323,8.29630453551499,111.965277375009,109.100662218909,3.66420737997229,5.87178275430495,0,17.192688012024,19.0589062711977,7.21462408056651,13.6919697143222,0.496454756004426,0,0.639969691173627,0.91763712426868,0,0,0,0.380046838912748,1.00812051903972,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04017381807851,106.628234875668,75.9571986061969,0,0.286533439938757,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0.384218305321555,0.311068836925433,0.135005938331691,0.210324961351382,0.571301968807607,0,0,0,0,1.10115880999389,1.65993539510744,1.22885226604995,0.263772575460388,0.457438218012048,1.56274011167028,2.51264699101243,0,1.06958773443767,0,0.284743361598206,0.931997229126503,0.681535739998656,0.0755715601067855,13.6236309689789,4.30211938490693,0,0,0.649776417447669,0.448026887097336,3.93244376368905,0,0,0,0,0,0,0,0.216491041011214,0,0,3.76806803072898,52.0465146130815,17.5161724096493,6.24547176358089,9.74289530598852,9.91646638201052,12.3592565253151,17.6383060703557,8.54532821041793,2.71914464507811,11.1341504828332,4.42305275974937,6.47067399789637,5.96272099843063,8.24287930329878,3.72783522436244,14.0534782565543,10.6817820474862,3.83185582812887,15.4561510612637,4.79922184794726,7.11593271609162,1.9472783122627,0.457500602818626,0.376963056338593,1.04294592115366,0.511430914660661,1.24672826735736,1.46017136760982,2.74966282395854,5.349499736234,3.53811861807145,9.04899980311838,2.73252930221678,0.229902104433473,0.720248519221397,0.90422890701429,1.76894897793452,1.15302348256365,0.937017245597288,3.3631438196072,0.646703978798527,1.13463648100692,0.703804496655795,0.876782929710299,2.22437799380478,2.43776516565517,2.88094990971121,2.18937693500343,3.51106593656617,1.02939162845886,0.852490498186778,2.69263504296152,3.75241695969754,4.68161359798639,4.7348947117042,5.1158700254325,3.85667782218446,8.8362899005155,8.31647544338819,7.47298191149885,8.3925523455875,21.8342727225197,22.7803354823855,21.3451981640985,19.7595103761946,22.4124719329821,3.15434922846191,0.308713837137853,2.64335026387038,1.32225283331772,5.33220626338085,3.0190767341857,2.83508414908605,2.01683524623343,2.00140239460383,3.04361001780095,6.64340686162316,4.28217282282428,5.27803938480566,5.17286827306992,3.11942539390592,2.69645822596266,3.8904848977445,3.58454291857861,6.2590407314517,6.85491075658373,10.1436962105772,12.0154283428735,11.6371492300575,12.764719220038,19.5400899713955,17.4179974615931,15.8568715119789,13.4502908674763,1.77871576252289,0.83422552858047,2.35870794135844,1.79889689907883,0.811440485554012,0.964708639009667,1.01850340712568,4.31544206176216,1.94562272130042,1.09824565275233,0,6.32639611036456,2.80833905803104,2.27320990152401,1.97337154874103,1.4473305640901,99.9514758801331,0.947457058852424,5.0519142697028,6.45031325945715,11.2651319178481,23.618382299296,50.7032955087209,37.4656603886974,68.8865579744055,70.868700687608,59.4766287092427,113.065687153859,80.1258315857756,85.3429445630918,0,0,6.88469982226651,6.07060841870411,2.56880943980467,1.05490517932983,0,12.1186045058099,2.2085575359138,2.34263246577983,0.646270193198397,0.477937595905104,0.222798674082394,0.566153061577665,0,2.33804686329049,0.790575555893047,0.963963949265421,2.98074178937364,1.6025904330053,4.0721739838394,3.29940245945071,5.30980553359851,1.45668381692989,0.906970670894253,1.13163047853539,0.885905678642318,3.68922177532713,3.6179961043551,7.27067458955011,7.48644494607915,3.47640433729398,1.05418608574999,3.09406629744561,1.02131881726136,1.08036656418786,0.776152102696527,1.07168517515796,2.30542303734956,3.56737635204141,1.97458824722545,1.522324745573,7.04015124191131,9.32061111800809,1.54369878638473,3.46261131177108,4.35953952078945,3.1362720962641,2.50681922406587,2.46211349617592,4.08073171281791,1.66882771809459,11.4483490134561,3.92135049130123,3.1483069652851,5.65105371014073,7.10809984149331,6.17701067657611,42.1546506384761,34.5680087239435,29.2983944465378,3.81868247206045,3.16335993581135,2.84647253977588,2.48412283890143,3.3454127362315,2.62035076495413,2.83215127408124,3.88471241909079,2.87931536182433,3.36998930558661,6.83473244395618,0,1.64468200648377,0.66183396182839,0.777804753376191,0.258319646955462,0.844780627453891,0.117357238645754,0.651021924219751,0.104859344425711,0.241584120826006,1.15212002503146,23.7008340471134,12.3662381327,12.9415806027682,17.0196278100911,14.3221356533985,15.8945083825012,13.9426721443164,15.8027794076798,16.7604306913925,18.518254017165,14.7206230299787,18.516997340553,19.5310038529869,21.8559807079534,11.789979947991,0.221985953374065,0.269141569828427,2.18250001273302,3.86379188064381,4.31669693537719,5.49454872801795,1.2862102744744,3.51100472824754,0,0.920650473014354,0,0.343706364687375,0.685082519770642,1.5107877947794,0.675022500231806,0,0,1.55328093525546,1.14166082342594,2.79317411380722,0.853668028770671,1.45864030240976,1.0480658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|phase1_expression=0,0,0,0,0,0,0,91.2901896731944,40.4063632575284,49.8557441065846,10.9579499664323,8.29630453551499,111.965277375009,109.100662218909,3.66420737997229,5.87178275430495,0,17.192688012024,19.0589062711977,7.21462408056651,13.6919697143222,0.496454756004426,0,0.639969691173627,0.91763712426868,0,0,0,0.380046838912748,1.00812051903972,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.04017381807851,106.628234875668,75.9571986061969,0,0.286533439938757,0,0,0,0,0,0,0,0.988866362566974,0.7104801149461,0,0.384218305321555,0.311068836925433,0.135005938331691,0.210324961351382,0.571301968807607,0,0,0,0,1.10115880999389,1.65993539510744,1.22885226604995,0.263772575460388,0.457438218012048,1.56274011167028,2.51264699101243,0,1.06958773443767,0,0.284743361598206,0.931997229126503,0.681535739998656,0.0755715601067855,13.6236309689789,4.30211938490693,0,0,0.649776417447669,0.448026887097336,3.93244376368905,0,0,0,0,0,0,0,0.216491041011214,0,0,3.76806803072898,52.0465146130815,17.5161724096493,6.24547176358089,9.74289530598852,9.91646638201052,12.3592565253151,17.6383060703557,8.54532821041793,2.71914464507811,11.1341504828332,4.42305275974937,6.47067399789637,5.96272099843063,8.24287930329878,3.72783522436244,14.0534782565543,10.6817820474862,3.83185582812887,15.4561510612637,4.79922184794726,7.11593271609162,1.9472783122627,0.457500602818626,0.376963056338593,1.04294592115366,0.511430914660661,1.24672826735736,1.46017136760982,2.74966282395854,5.349499736234,3.53811861807145,9.04899980311838,2.73252930221678,0.229902104433473,0.720248519221397,0.90422890701429,1.76894897793452,1.15302348256365,0.937017245597288,3.3631438196072,0.646703978798527,1.13463648100692,0.703804496655795,0.876782929710299,2.22437799380478,2.43776516565517,2.88094990971121,2.18937693500343,3.51106593656617,1.02939162845886,0.852490498186778,2.69263504296152,3.75241695969754,4.68161359798639,4.7348947117042,5.1158700254325,3.85667782218446,8.8362899005155,8.31647544338819,7.47298191149885,8.3925523455875,21.8342727225197,22.7803354823855,21.3451981640985,19.7595103761946,22.4124719329821,3.15434922846191,0.308713837137853,2.64335026387038,1.32225283331772,5.33220626338085,3.0190767341857,2.83508414908605,2.01683524623343,2.00140239460383,3.04361001780095,6.64340686162316,4.28217282282428,5.27803938480566,5.17286827306992,3.11942539390592,2.69645822596266,3.8904848977445,3.58454291857861,6.2590407314517,6.85491075658373,10.1436962105772,12.0154283428735,11.6371492300575,12.764719220038,19.5400899713955,17.4179974615931,15.8568715119789,13.4502908674763,1.77871576252289,0.83422552858047,2.35870794135844,1.79889689907883,0.811440485554012,0.964708639009667,1.01850340712568,4.31544206176216,1.94562272130042,1.09824565275233,0,6.32639611036456,2.80833905803104,2.27320990152401,1.97337154874103,1.4473305640901,99.9514758801331,0.947457058852424,5.0519142697028,6.45031325945715,11.2651319178481,23.618382299296,50.7032955087209,37.4656603886974,68.8865579744055,70.868700687608,59.4766287092427,113.065687153859,80.1258315857756,85.3429445630918,0,0,6.88469982226651,6.07060841870411,2.56880943980467,1.05490517932983,0,12.1186045058099,2.2085575359138,2.34263246577983,0.646270193198397,0.477937595905104,0.222798674082394,0.566153061577665,0,2.33804686329049,0.790575555893047,0.963963949265421,2.98074178937364,1.6025904330053,4.0721739838394,3.29940245945071,5.30980553359851,1.45668381692989,0.906970670894253,1.13163047853539,0.885905678642318,3.68922177532713,3.6179961043551,7.27067458955011,7.48644494607915,3.47640433729398,1.05418608574999,3.09406629744561,1.02131881726136,1.08036656418786,0.776152102696527,1.07168517515796,2.30542303734956,3.56737635204141,1.97458824722545,1.522324745573,7.04015124191131,9.32061111800809,1.54369878638473,3.46261131177108,4.35953952078945,3.1362720962641,2.50681922406587,2.46211349617592,4.08073171281791,1.66882771809459,11.4483490134561,3.92135049130123,3.1483069652851,5.65105371014073,7.10809984149331,6.17701067657611,42.1546506384761,34.5680087239435,29.2983944465378,3.81868247206045,3.16335993581135,2.84647253977588,2.48412283890143,3.3454127362315,2.62035076495413,2.83215127408124,3.88471241909079,2.87931536182433,3.36998930558661,6.83473244395618,0,1.64468200648377,0.66183396182839,0.777804753376191,0.258319646955462,0.844780627453891,0.117357238645754,0.651021924219751,0.104859344425711,0.241584120826006,1.15212002503146,23.7008340471134,12.3662381327,12.9415806027682,17.0196278100911,14.3221356533985,15.8945083825012,13.9426721443164,15.8027794076798,16.7604306913925,18.518254017165,14.7206230299787,18.516997340553,19.5310038529869,21.8559807079534,11.789979947991,0.221985953374065,0.269141569828427,2.18250001273302,3.86379188064381,4.31669693537719,5.49454872801795,1.2862102744744,3.51100472824754,0,0.920650473014354,0,0.343706364687375,0.685082519770642,1.5107877947794,0.675022500231806,0,0,1.55328093525546,1.14166082342594,2.79317411380722,0.853668028770671,1.45864030240976,1.0480658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|short_description=p2@Arhgef3
|short_description=p2@Arhgef3
}}
}}

Latest revision as of 20:14, 25 September 2015

Short description:p2@Arhgef3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Arhgef3_5end
Coexpression cluster:MCL_coexpression_mm9:2898
Association with transcript: 0bp_to_ENSMUST00000049206, NM_027871, uc007stp.1_5end
EntrezGene:Arhgef3
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Arhgef3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E991.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E740.41
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F249.86
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E610.96
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F18.30
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E4111.97
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E8109.10
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A13.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A35.87
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A217.19
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A419.06
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A67.21
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A313.69
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.50
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.64
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.92
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.38
Ileum epithelium, pool2.CNhs13232.10253-104C11.01
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A26.04
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9106.63
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A175.96
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C30.00
Mouse Granule cells, donor2.CNhs12357.11731-123E30.00
Mouse Granule cells, donor3.CNhs12108.11636-122C70.00
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.71
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.31
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.14
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.21
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.00
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.00
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.00
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D31.10
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.66
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.23
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D40.26
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F40.46
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E42.51
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.00
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.28
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.68
Mouse Schwann, donor2.CNhs12573.11746-123F90.08
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G313.62
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F74.30
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.65
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A73.93
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.00
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B63.77
accessory axillary lymph node, adult.CNhs10475.1063-29H952.05
adrenal gland, adult.CNhs10508.49-24D717.52
adrenal gland, embryo E14.CNhs11038.406-44C56.25
adrenal gland, embryo E16.CNhs11004.1254-43D69.74
adrenal gland, embryo E17.CNhs11043.1263-45I19.92
adrenal gland, embryo E18.CNhs11026.1262-18F512.36
adrenal gland, neonate N00.CNhs11191.1311-23C117.64
adrenal gland, neonate N25.CNhs11223.1377-27I38.55
amnion, adult pregnant day17.5.CNhs10488.583-22A82.72
aorta, adult.CNhs10498.46-23H111.13
bone (os femoris), adult.CNhs10483.56-12G24.42
bone (os femoris), neonate N02.CNhs11227.1985-43F56.47
bone (os femoris), neonate N16.CNhs11225.1525-43A65.96
bone (os femoris), neonate N20.CNhs11195.1350-25C38.24
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B214.05
cerebellum, neonate N30.CNhs11135.1395-42I210.68
colon, adult.CNhs10468.36-18H73.83
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C715.46
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D47.12
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D80.46
corpus striatum, neonate N00.CNhs11226.630-43F10.38
cortex, adult.CNhs10473.12-14D51.04
cortex, neonate N30.CNhs11107.1392-42F20.51
diencephalon, adult.CNhs10482.20-12F21.25
diencephalon, neonate N30.CNhs11201.1388-42B21.46
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B12.75
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A25.35
epididymis, adult.CNhs10490.58-23B23.54
eyeball, adult.CNhs10484.31-12G49.05
eyeball, embryo E12.CNhs11016.345-16C62.73
eyeball, embryo E14.CNhs10521.399-16E20.23
eyeball, embryo E15.CNhs10593.426-16C90.72
eyeball, embryo E17.CNhs11023.1261-18D40.90
eyeball, neonate N00.CNhs11207.633-15C61.77
eyeball, neonate N01.CNhs11140.1532-43E71.15
eyeball, neonate N02.CNhs11205.1551-44G80.94
eyeball, neonate N16.CNhs11188.777-19A23.36
forelimb, embryo E11.CNhs10596.335-25E20.65
forelimb, embryo E12.CNhs10600.359-14H21.13
forelimb, embryo E13.CNhs10589.384-1E20.70
forelimb, embryo E14.CNhs10577.413-26A80.88
forelimb, embryo E15.CNhs11007.437-20E72.22
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B52.88
gonad, embryo E13.CNhs11044.1564-45I62.19
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C83.51
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D21.03
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.85
heart, embryo E11.CNhs10586.331-24E92.69
heart, embryo E12.CNhs11015.353-12F53.75
heart, embryo E13.CNhs11013.376-3I94.68
heart, embryo E14.CNhs10597.403-26D44.73
heart, embryo E15.CNhs11017.431-16C85.12
heart, embryo E16.CNhs11021.457-17C63.86
heart, embryo E17.CNhs11025.479-18E58.84
heart, embryo E18.CNhs11030.1283-20G38.32
heart, neonate N00.CNhs11213.639-21E37.47
heart, neonate N03.CNhs11221.1349-25I28.39
heart, neonate N10.CNhs11118.749-24G121.83
heart, neonate N16.CNhs11209.782-15G122.78
heart, neonate N20.CNhs11127.821-26I621.35
heart, neonate N25.CNhs11196.1351-25D319.76
heart, neonate N30.CNhs11202.1390-42D222.41
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G10.31
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A31.32
intestine, embryo E12.CNhs11019.1251-16I55.33
intestine, embryo E13.CNhs11010.381-16D53.02
intestine, embryo E15.CNhs10602.976-16D82.84
intestine, embryo E16.CNhs10585.463-22H42.02
intestine, embryo E17.CNhs10582.482-18D32.00
intestine, embryo E18.CNhs10526.1289-20F73.04
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E94.28
intestine, neonate N06.CNhs11102.688-20B85.28
intestine, neonate N07.CNhs11095.720-20F25.17
intestine, neonate N10.CNhs11098.755-23A53.12
intestine, neonate N20.CNhs11187.827-18D12.70
intestine, neonate N25.CNhs11121.1352-25E33.89
intestine, neonate N30.CNhs11131.1384-42G13.58
kidney, embryo E14.CNhs10606.411-4I96.26
kidney, embryo E15.CNhs10997.434-16F86.85
kidney, embryo E16.CNhs10584.464-22A510.14
kidney, embryo E17.CNhs11028.483-18I212.02
kidney, embryo E18.CNhs11001.1288-20C711.64
kidney, neonate N00.CNhs11214.646-21G712.76
kidney, neonate N10.CNhs11206.758-6D519.54
kidney, neonate N20.CNhs11113.832-19I117.42
kidney, neonate N25.CNhs11122.1353-25F315.86
kidney, neonate N30.CNhs11203.1385-42H113.45
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F80.83
liver, embryo E13.CNhs10524.378-3H62.36
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D70.81
liver, embryo E16.CNhs10523.462-17F50.96
liver, embryo E17.CNhs10510.481-18A31.02
liver, embryo E18.CNhs10579.499-43G44.32
liver, neonate N00.CNhs11117.641-24F41.95
liver, neonate N03.CNhs11123.1345-25G21.10
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H26.33
liver, neonate N10.CNhs11115.751-24B92.81
liver, neonate N20.CNhs11220.823-25A32.27
liver, neonate N25.CNhs11198.1368-26H11.97
liver, neonate N30.CNhs11106.1382-42D11.45
lung, adult.CNhs10474.28-22B199.95
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F85.05
lung, embryo E15.CNhs11020.432-17C56.45
lung, embryo E16.CNhs10998.458-17B611.27
lung, embryo E17.CNhs10605.480-44A623.62
lung, embryo E18.CNhs10583.1287-20I650.70
lung, neonate N00.CNhs11224.640-42C637.47
lung, neonate N06.CNhs11212.683-20E568.89
lung, neonate N07.CNhs11111.715-19A370.87
lung, neonate N10.CNhs11219.750-23E659.48
lung, neonate N20.CNhs11109.822-18A4113.07
lung, neonate N25.CNhs11119.1359-25C780.13
lung, neonate N30.CNhs11133.1394-42H285.34
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H26.07
medulla oblongata, adult.CNhs10477.17-12C22.57
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C212.12
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.21
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E22.34
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.65
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.48
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.22
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.57
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D52.34
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.79
olfactory brain, adult.CNhs10489.18-22I90.96
ovary, adult.CNhs10507.91-2I72.98
ovary, embryo E18.CNhs11040.505-44H71.60
ovary, neonate N00.CNhs11217.1299-22I44.07
oviduct, adult pregnant day01.CNhs10500.988-6G63.30
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F41.46
pancreas, embryo E15.CNhs11042.1556-45F20.91
pancreas, embryo E16.CNhs11003.460-26E51.13
pancreas, embryo E17.CNhs10599.1558-45G30.89
pancreas, embryo E18.CNhs10580.1535-43I73.69
pancreas, neonate N00.CNhs11105.645-26G93.62
pancreas, neonate N01.CNhs11138.1531-43D77.27
pancreas, neonate N02.CNhs11139.1539-43D87.49
pancreas, neonate N16.CNhs11136.787-43B63.48
pancreas, neonate N25.CNhs11094.1555-45E21.05
pancreas, neonate N30.CNhs11182.1548-44H53.09
pituitary gland, adult.CNhs10493.21-1G81.02
pituitary gland, embryo E12.CNhs11018.346-16E61.08
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A51.07
pituitary gland, embryo E15.CNhs10592.427-16B92.31
pituitary gland, embryo E16.CNhs11036.449-43F63.57
pituitary gland, embryo E17.CNhs11039.1265-44F51.97
pituitary gland, neonate N00.CNhs11190.1308-22E91.52
placenta, adult pregnant day10.CNhs10472.539-13I77.04
placenta, adult pregnant day17.CNhs10464.577-18G39.32
prostate, adult.CNhs10470.859-1F81.54
skin, adult.CNhs10492.30-1C33.46
skin, neonate N00.CNhs11124.650-25G44.36
skin, neonate N03.CNhs11215.662-22H33.14
skin, neonate N06.CNhs11097.693-20I52.51
skin, neonate N10.CNhs11108.762-6C42.46
small intestine, neonate N16.CNhs11114.790-21I14.08
spinal cord, adult.CNhs10505.24-13C91.67
spleen, adult.CNhs10465.25-2G211.45
spleen, embryo E16.CNhs11035.461-43C13.92
spleen, embryo E18.CNhs11011.1271-21F23.15
spleen, neonate N10.CNhs11116.752-24D15.65
spleen, neonate N20.CNhs11112.824-19H17.11
spleen, neonate N25.CNhs11099.1354-25G36.18
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C642.15
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C934.57
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D329.30
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E33.16
stomach, embryo E15.CNhs10603.1252-16G82.85
stomach, embryo E16.CNhs11022.459-17D42.48
stomach, embryo E17.CNhs11006.1035-18D53.35
stomach, embryo E18.CNhs10999.1286-20C62.62
stomach, neonate N03.CNhs11193.1340-24B82.83
stomach, neonate N07.CNhs11210.718-18A93.88
stomach, neonate N25.CNhs11104.1355-25E42.88
stomach, neonate N30.CNhs11134.1386-42I13.37
submandibular gland, adult.CNhs10469.59-29C16.83
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.64
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.78
testis, embryo E17.CNhs11029.486-18I50.26
testis, embryo E18.CNhs11027.503-18G50.84
testis, neonate N00.CNhs11189.1300-22B70.12
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.10
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E21.15
thymus, adult.CNhs10471.38-12B523.70
thymus, embryo E14.CNhs11041.402-44I412.37
thymus, embryo E15.CNhs11005.430-45I212.94
thymus, embryo E16.CNhs11002.456-26C517.02
thymus, embryo E17.CNhs10581.478-18C114.32
thymus, embryo E18.CNhs10595.1273-19G415.89
thymus, neonate N02.CNhs11181.1541-43F813.94
thymus, neonate N03.CNhs11137.2104-43C715.80
thymus, neonate N06.CNhs11197.681-26C416.76
thymus, neonate N07.CNhs11211.713-19D318.52
thymus, neonate N10.CNhs11194.748-24E414.72
thymus, neonate N20.CNhs11186.820-7A218.52
thymus, neonate N25.CNhs11125.1362-25G719.53
thymus, neonate N30.CNhs11132.1393-42G221.86
tongue, adult.CNhs10499.32-1B411.79
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.22
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.27
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.18
urinary bladder, adult.CNhs10481.879-12E43.86
uterus, adult pregnant day19.CNhs10497.590-15F54.32
uterus, adult.CNhs10509.92-27E55.49
vagina, adult.CNhs10502.89-27D51.29
vesicular gland, adult.CNhs10491.51-27F83.51
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A10.00
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.92
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.00
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A51.51
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.00
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A80.00
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.55
whole body, embryo E11.CNhs11014.324-5I81.14
whole body, embryo E12.CNhs10587.857-27C92.79
whole body, embryo E13.CNhs10512.372-23H20.85
whole body, embryo E14.5.CNhs10578.420-27D21.46
whole body, embryo E14.CNhs10519.395-14B11.05
whole body, embryo E16.CNhs10514.453-14F23.13
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G55.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.50
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G56.10
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.06
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G56.59
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G54.72
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G54.23
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G54.19
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G52.31
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G55.77
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G54.56
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G56.86
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.55
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G54.77
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G54.80
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G53.20
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G54.15
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G54.76
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G54.48
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G55.05
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G52.61
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G52.56
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G52.46
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G53.41
whole body, embryo E17.5.CNhs10513.490-9F94.44
whole body, embryo E17.CNhs10517.475-3I51.50
whole body, embryo E18.CNhs10516.493-3B36.08
whole body, neonate N00.CNhs10525.657-19C27.31
whole body, neonate N01.CNhs10576.659-23C65.93
whole body, neonate N06.CNhs10515.692-21D18.60
whole body, neonate N10.CNhs10518.761-6B410.43





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
mature alpha-beta T cell8.95e-079
alpha-beta T cell8.95e-079
immature T cell8.95e-079
mature T cell8.95e-079
immature alpha-beta T cell8.95e-079

Uber anatomy
Ontology termp-valuen
respiratory system1.89e-1242
respiratory tract3.47e-1241
mixed endoderm/mesoderm-derived structure1.80e-0935
hemopoietic organ3.31e-0929
immune organ3.31e-0929
pharynx1.00e-0824
upper respiratory tract1.00e-0824
chordate pharynx1.00e-0824
pharyngeal arch system1.00e-0824
pharyngeal region of foregut1.00e-0824
gland of gut1.41e-0824
thymus2.44e-0823
neck2.44e-0823
respiratory system epithelium2.44e-0823
hemolymphoid system gland2.44e-0823
pharyngeal epithelium2.44e-0823
thymic region2.44e-0823
pharyngeal gland2.44e-0823
entire pharyngeal arch endoderm2.44e-0823
thymus primordium2.44e-0823
early pharyngeal endoderm2.44e-0823
foregut1.46e-0780
lung2.69e-0714
respiratory tube2.69e-0714
respiration organ2.69e-0714
pair of lungs2.69e-0714
lung primordium2.69e-0714
lung bud2.69e-0714
epithelial bud3.64e-0717
lateral plate mesoderm7.24e-0787
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