FFCP PHASE1:Mm9::chr7:132634989..132635000,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=67711 | |EntrezGene=67711 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1058 | |||
|TSSclassifier=NA | |||
|UniProt=Q9D720 | |UniProt=Q9D720 | ||
|association_with_transcript=55bp_to_NM_026330,uc009jqa.2_5end | |association_with_transcript=55bp_to_NM_026330,uc009jqa.2_5end | ||
|cluster_id=chr7:132634989..132635000,- | |||
|description=CAGE_peak_2_at_Nsmce1_5end | |description=CAGE_peak_2_at_Nsmce1_5end | ||
|id=chr7:132634989..132635000,- | |id=chr7:132634989..132635000,- | ||
|ontology_enrichment_celltype=CL:0000542!9.53e-08!13;CL:0000051!9.53e-08!13;CL:0000838!1.03e-07!12;CL:0000084!4.14e-07!11;CL:0000827!4.14e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000838,2.00e-11,12;CL:0000084,2.26e-10,11;CL:0000827,2.26e-10,11;CL:0000542,2.85e-10,13;CL:0000051,2.85e-10,13;CL:0000988,3.47e-10,32;CL:0002032,3.47e-10,32;CL:0000037,3.47e-10,32;CL:0000837,3.47e-10,32;CL:0002031,5.31e-09,25;CL:0000791,2.15e-08,9;CL:0000789,2.15e-08,9;CL:0002420,2.15e-08,9;CL:0002419,2.15e-08,9;CL:0000790,2.15e-08,9;CL:0000738,3.51e-08,17;CL:0002087,3.51e-08,17;CL:0000624,2.14e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.37e-10!48;UBERON:0004177!3.23e-09!29;UBERON:0002390!5.34e-09!45;UBERON:0003061!5.34e-09!45;UBERON:0000072!1.08e-08!27;UBERON:0002370!1.11e-08!23;UBERON:0000974!1.11e-08!23;UBERON:0004807!1.11e-08!23;UBERON:0005058!1.11e-08!23;UBERON:0003351!1.11e-08!23;UBERON:0009113!1.11e-08!23;UBERON:0003295!1.11e-08!23;UBERON:0009722!1.11e-08!23;UBERON:0005562!1.11e-08!23;UBERON:0007690!1.11e-08!23;UBERON:0003408!1.47e-08!24;UBERON:0006562!1.04e-07!24;UBERON:0001557!1.04e-07!24;UBERON:0001042!1.04e-07!24;UBERON:0008814!1.04e-07!24;UBERON:0009145!1.04e-07!24;UBERON:0002405!7.37e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.34e-15,48;UBERON:0002405,6.34e-15,48;UBERON:0002370,9.33e-15,23;UBERON:0000974,9.33e-15,23;UBERON:0004807,9.33e-15,23;UBERON:0005058,9.33e-15,23;UBERON:0003351,9.33e-15,23;UBERON:0009113,9.33e-15,23;UBERON:0003295,9.33e-15,23;UBERON:0009722,9.33e-15,23;UBERON:0005562,9.33e-15,23;UBERON:0007690,9.33e-15,23;UBERON:0000072,1.52e-14,27;UBERON:0004177,2.87e-14,29;UBERON:0005057,2.87e-14,29;UBERON:0006562,7.19e-14,24;UBERON:0003408,7.19e-14,24;UBERON:0001557,7.19e-14,24;UBERON:0001042,7.19e-14,24;UBERON:0008814,7.19e-14,24;UBERON:0009145,7.19e-14,24;UBERON:0002390,7.58e-14,45;UBERON:0003061,7.58e-14,45;UBERON:0000077,1.33e-11,35;UBERON:0002368,3.92e-08,60;UBERON:0007811,4.59e-08,36;UBERON:0000065,5.14e-08,41;UBERON:0001004,1.14e-07,42;UBERON:0002530,6.95e-07,65 | |||
|phase1_expression=0.640595388419176,2.09385244583617,0.909998478779072,1.81478526784098,0.500895729946347,0.503637815735669,0.467225281191051,7.10178278928669,3.37892933164,4.44722600011788,0.68487187290202,1.27635454392538,6.16322627752341,8.56719943706175,0.666219523631325,0.607425802169478,1.39912375625629,4.25873923233621,5.07323404341233,5.09267582157636,5.01755411891312,3.77305614563364,3.91799683708403,0.47997726838022,1.83527424853736,0.57423196411502,0.86152399231815,1.50829862880122,0.760093677825496,2.26827116783938,1.77384408524244,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0.837063261473815,4.6880120671428,1.0470474879476,0,0.683045484958446,1.45653105909346,0.755380907853464,0.709638518536602,0.367093504323363,0.782391344348039,0.872100625521786,1.09843091367236,0.194429899074283,0,1.43752564364972,4.53013036355888,5.07753499407941,4.03312558970957,1.02903774414379,0.286533439938757,0,1.21389876515759,0.528990979272033,0,0.677689064138264,0,1.3498495759221,0,0.7104801149461,0.898800331555214,1.15265491596466,0.933206510776299,1.4850653216486,0.210324961351382,0.571301968807607,0.441737081903227,1.71487118900936,1.15014565221884,1.83843757322004,1.10115880999389,0,0,0.791317726381163,0.365950574409639,0,0,0,0.15279824777681,0.589257170947335,0.569486723196412,0.186399445825301,0.984440513331393,0.755715601067855,1.15945795480671,0.860423876981386,0,0,0,0,1.68533304158102,0.852151612890289,0.779358013808606,0.70667914902068,0.704217098883403,0,2.54805239706646,0,0.865964164044856,2.53359865475099,1.51657333504435,0.5709193985953,4.66088190564909,0.445326417194474,1.90833859442749,2.74018930480927,0.691846491768175,1.65794904607885,0.23517741427141,1.50799909595611,3.46072954828123,0.144599356919912,1.76922110389975,0.323533699894818,0.662524555381181,0,0,0,0,0.766371165625774,4.79260498023681,1.79970819298022,2.79554499560742,0,0.457500602818626,0.376963056338593,0,0,0.41557608911912,0.162241263067758,0.611036183101898,0.497627882440372,0.252722758433675,0.210441855886474,0.390361328888111,0.689706313300419,1.26043490863744,0.150704817835715,0.272145996605311,0.2562274405697,0.562210347358373,0,0.646703978798527,0,0.351902248327898,0,0.278047249225598,0.348252166522167,0.61734640922383,0.398068533636986,0,1.28673953557358,0.568326998791185,0.621377317606506,0.234526059981096,0.540186184383045,0.23674473558521,0.196764231747404,0.462801338662135,0.697601834251224,0.804820204198858,0.116765342367169,0.329119699826961,0.164167464079095,0.405344047729279,0.292399974850665,0.658650345873152,0.134206418760372,0.210289948564127,0.514523061896422,0,0,0.853153002140936,0.232236671860439,0.38660238396628,0.403367049246685,0.444756087689741,0.760902504450237,0,0.494096864172033,0.502670417600539,1.39269530428806,0.58489226135736,0.898819408654221,0,0.199141273254367,0.948339504765408,0.913988100877831,0,0.203651327845314,0,0.280543279561274,0.442655759869801,0.295220295959204,0.156998727841375,0.370191491765402,0,1.00107063429656,0.982794975566015,0.674586337154561,0.811440485554012,1.20588579876208,1.01850340712568,0.575392274901621,0.648540907100142,0.274561413188081,0,1.11642284300551,0.312037673114561,0.505157755894224,0,0.482443521363367,0.184753190166605,0.757965647081939,0.814824882210129,0.848725428875941,0.469380496577004,0.167506257441816,0.714130922658041,0.195133647857799,0.630540576424764,0.221464689648775,0.797273843287435,0,1.03610989119537,0.144649058581512,0,0,0.491764273019036,0,0.160550589987792,0.234423373184406,0.327869890753351,0.252470927204373,1.26203287766503,0.780877488593277,0.430846795465598,0.477937595905104,0.445597348164788,0.283076530788832,0.809621403349789,0.876767573733936,0.395287777946524,0,0.567760340833074,0.35613120733451,0.651547837414304,0.659880491890142,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0.922305443831782,0.258428293168221,0,0.356497378384721,0,1.05418608574999,0,0,0.18006109403131,0.258717367565509,1.50035924522115,0.532020700926821,1.24858172321449,0.329098041204242,0,0.23467170806371,0,0,0,0.484393280087717,0.361877549568935,0,0.164140899745061,1.1659233465194,0,0.512612642393558,0.412773735926445,0.740778109478847,1.50694765603753,1.50363650493128,1.60144721244566,3.56954702987096,2.79902904647316,2.76399947608848,0,0.790839983952838,0.609958401380546,0.432021363287205,1.04544148007234,0.218362563746178,0.944050424693745,0.247960367176008,0.523511883968059,0.129614973291793,0.621339313086926,25.3661822407886,0.598066184175915,0.496375471371293,0.972255941720238,1.03327858782185,0.675824501963113,0.469428954583016,0.13020438484395,1.15345278868282,7.9722759872582,12.3852902690882,3.16011120628178,1.82452693761148,0.513554785824136,1.81889152168913,3.04345382634718,2.98022032171897,3.00488623799922,5.02144392393563,2.42319479875554,2.66723823292499,3.42809029465258,3.21611006441183,4.42574471545516,4.55819918508119,0,0,0.0897138566094757,0,0.19318959403219,0.563047426353546,0.549454872801795,0.64310513723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|phase1_expression=0.640595388419176,2.09385244583617,0.909998478779072,1.81478526784098,0.500895729946347,0.503637815735669,0.467225281191051,7.10178278928669,3.37892933164,4.44722600011788,0.68487187290202,1.27635454392538,6.16322627752341,8.56719943706175,0.666219523631325,0.607425802169478,1.39912375625629,4.25873923233621,5.07323404341233,5.09267582157636,5.01755411891312,3.77305614563364,3.91799683708403,0.47997726838022,1.83527424853736,0.57423196411502,0.86152399231815,1.50829862880122,0.760093677825496,2.26827116783938,1.77384408524244,0,0,0,0.288851619751275,0.664938581433969,0.204169356262369,0.837063261473815,4.6880120671428,1.0470474879476,0,0.683045484958446,1.45653105909346,0.755380907853464,0.709638518536602,0.367093504323363,0.782391344348039,0.872100625521786,1.09843091367236,0.194429899074283,0,1.43752564364972,4.53013036355888,5.07753499407941,4.03312558970957,1.02903774414379,0.286533439938757,0,1.21389876515759,0.528990979272033,0,0.677689064138264,0,1.3498495759221,0,0.7104801149461,0.898800331555214,1.15265491596466,0.933206510776299,1.4850653216486,0.210324961351382,0.571301968807607,0.441737081903227,1.71487118900936,1.15014565221884,1.83843757322004,1.10115880999389,0,0,0.791317726381163,0.365950574409639,0,0,0,0.15279824777681,0.589257170947335,0.569486723196412,0.186399445825301,0.984440513331393,0.755715601067855,1.15945795480671,0.860423876981386,0,0,0,0,1.68533304158102,0.852151612890289,0.779358013808606,0.70667914902068,0.704217098883403,0,2.54805239706646,0,0.865964164044856,2.53359865475099,1.51657333504435,0.5709193985953,4.66088190564909,0.445326417194474,1.90833859442749,2.74018930480927,0.691846491768175,1.65794904607885,0.23517741427141,1.50799909595611,3.46072954828123,0.144599356919912,1.76922110389975,0.323533699894818,0.662524555381181,0,0,0,0,0.766371165625774,4.79260498023681,1.79970819298022,2.79554499560742,0,0.457500602818626,0.376963056338593,0,0,0.41557608911912,0.162241263067758,0.611036183101898,0.497627882440372,0.252722758433675,0.210441855886474,0.390361328888111,0.689706313300419,1.26043490863744,0.150704817835715,0.272145996605311,0.2562274405697,0.562210347358373,0,0.646703978798527,0,0.351902248327898,0,0.278047249225598,0.348252166522167,0.61734640922383,0.398068533636986,0,1.28673953557358,0.568326998791185,0.621377317606506,0.234526059981096,0.540186184383045,0.23674473558521,0.196764231747404,0.462801338662135,0.697601834251224,0.804820204198858,0.116765342367169,0.329119699826961,0.164167464079095,0.405344047729279,0.292399974850665,0.658650345873152,0.134206418760372,0.210289948564127,0.514523061896422,0,0,0.853153002140936,0.232236671860439,0.38660238396628,0.403367049246685,0.444756087689741,0.760902504450237,0,0.494096864172033,0.502670417600539,1.39269530428806,0.58489226135736,0.898819408654221,0,0.199141273254367,0.948339504765408,0.913988100877831,0,0.203651327845314,0,0.280543279561274,0.442655759869801,0.295220295959204,0.156998727841375,0.370191491765402,0,1.00107063429656,0.982794975566015,0.674586337154561,0.811440485554012,1.20588579876208,1.01850340712568,0.575392274901621,0.648540907100142,0.274561413188081,0,1.11642284300551,0.312037673114561,0.505157755894224,0,0.482443521363367,0.184753190166605,0.757965647081939,0.814824882210129,0.848725428875941,0.469380496577004,0.167506257441816,0.714130922658041,0.195133647857799,0.630540576424764,0.221464689648775,0.797273843287435,0,1.03610989119537,0.144649058581512,0,0,0.491764273019036,0,0.160550589987792,0.234423373184406,0.327869890753351,0.252470927204373,1.26203287766503,0.780877488593277,0.430846795465598,0.477937595905104,0.445597348164788,0.283076530788832,0.809621403349789,0.876767573733936,0.395287777946524,0,0.567760340833074,0.35613120733451,0.651547837414304,0.659880491890142,0,0.242780636154981,0.302323556964751,0.377210159511796,0.295301892880773,0.922305443831782,0.258428293168221,0,0.356497378384721,0,1.05418608574999,0,0,0.18006109403131,0.258717367565509,1.50035924522115,0.532020700926821,1.24858172321449,0.329098041204242,0,0.23467170806371,0,0,0,0.484393280087717,0.361877549568935,0,0.164140899745061,1.1659233465194,0,0.512612642393558,0.412773735926445,0.740778109478847,1.50694765603753,1.50363650493128,1.60144721244566,3.56954702987096,2.79902904647316,2.76399947608848,0,0.790839983952838,0.609958401380546,0.432021363287205,1.04544148007234,0.218362563746178,0.944050424693745,0.247960367176008,0.523511883968059,0.129614973291793,0.621339313086926,25.3661822407886,0.598066184175915,0.496375471371293,0.972255941720238,1.03327858782185,0.675824501963113,0.469428954583016,0.13020438484395,1.15345278868282,7.9722759872582,12.3852902690882,3.16011120628178,1.82452693761148,0.513554785824136,1.81889152168913,3.04345382634718,2.98022032171897,3.00488623799922,5.02144392393563,2.42319479875554,2.66723823292499,3.42809029465258,3.21611006441183,4.42574471545516,4.55819918508119,0,0,0.0897138566094757,0,0.19318959403219,0.563047426353546,0.549454872801795,0.64310513723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| ||
|short_description=p2@Nsmce1 | |short_description=p2@Nsmce1 | ||
}} | }} |
Latest revision as of 20:27, 25 September 2015
Short description: | p2@Nsmce1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Nsmce1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1058 |
Association with transcript: | 55bp_to_NM_026330, uc009jqa.2_5end |
EntrezGene: | Nsmce1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphoid lineage restricted progenitor cell | 2.00e-11 | 12 |
T cell | 2.26e-10 | 11 |
pro-T cell | 2.26e-10 | 11 |
lymphocyte | 2.85e-10 | 13 |
common lymphoid progenitor | 2.85e-10 | 13 |
hematopoietic cell | 3.47e-10 | 32 |
hematopoietic oligopotent progenitor cell | 3.47e-10 | 32 |
hematopoietic stem cell | 3.47e-10 | 32 |
hematopoietic multipotent progenitor cell | 3.47e-10 | 32 |
hematopoietic lineage restricted progenitor cell | 5.31e-09 | 25 |
mature alpha-beta T cell | 2.15e-08 | 9 |
alpha-beta T cell | 2.15e-08 | 9 |
immature T cell | 2.15e-08 | 9 |
mature T cell | 2.15e-08 | 9 |
immature alpha-beta T cell | 2.15e-08 | 9 |
leukocyte | 3.51e-08 | 17 |
nongranular leukocyte | 3.51e-08 | 17 |
CD4-positive, alpha-beta T cell | 2.14e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
hemolymphoid system | 6.34e-15 | 48 |
immune system | 6.34e-15 | 48 |
thymus | 9.33e-15 | 23 |
neck | 9.33e-15 | 23 |
respiratory system epithelium | 9.33e-15 | 23 |
hemolymphoid system gland | 9.33e-15 | 23 |
pharyngeal epithelium | 9.33e-15 | 23 |
thymic region | 9.33e-15 | 23 |
pharyngeal gland | 9.33e-15 | 23 |
entire pharyngeal arch endoderm | 9.33e-15 | 23 |
thymus primordium | 9.33e-15 | 23 |
early pharyngeal endoderm | 9.33e-15 | 23 |
segment of respiratory tract | 1.52e-14 | 27 |
hemopoietic organ | 2.87e-14 | 29 |
immune organ | 2.87e-14 | 29 |
pharynx | 7.19e-14 | 24 |
gland of gut | 7.19e-14 | 24 |
upper respiratory tract | 7.19e-14 | 24 |
chordate pharynx | 7.19e-14 | 24 |
pharyngeal arch system | 7.19e-14 | 24 |
pharyngeal region of foregut | 7.19e-14 | 24 |
hematopoietic system | 7.58e-14 | 45 |
blood island | 7.58e-14 | 45 |
mixed endoderm/mesoderm-derived structure | 1.33e-11 | 35 |
endocrine gland | 3.92e-08 | 60 |
craniocervical region | 4.59e-08 | 36 |
respiratory tract | 5.14e-08 | 41 |
respiratory system | 1.14e-07 | 42 |
gland | 6.95e-07 | 65 |