FFCP PHASE1:Mm9::chr14:29831422..29831429,+: Difference between revisions
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{{FFCP|EntrezGene=319476|HGNC=|MCL_coexpression_id=10|UniProt=Q8BXQ3,A6H6T2|association_with_transcript=28bp_to_ENSMUST00000055662,NM_176920,uc007suj.2,uc007suk.2_5end|description=CAGE_peak_8_at_Lrtm1_5end|id=chr14:29831422..29831429,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0007100!3.33e-10!18;UBERON:0000948!3.33e-10!18;UBERON:0005498!3.33e-10!18;UBERON:0004140!3.33e-10!18;UBERON:0009881!3.33e-10!18;UBERON:0004141!3.33e-10!18;UBERON:0003084!3.33e-10!18;UBERON:0007005!3.33e-10!18;UBERON:0004139!3.33e-10!18;UBERON:0004291!3.33e-10!18;UBERON:0004535!1.06e-07!23;UBERON:0001009!1.06e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.71e-14,18;UBERON:0000948,6.71e-14,18;UBERON:0005498,6.71e-14,18;UBERON:0004140,6.71e-14,18;UBERON:0009881,6.71e-14,18;UBERON:0004141,6.71e-14,18;UBERON:0003084,6.71e-14,18;UBERON:0007005,6.71e-14,18;UBERON:0004139,6.71e-14,18;UBERON:0004291,6.71e-14,18;UBERON:0001723,2.90e-11,1;UBERON:0001033,2.90e-11,1;UBERON:0010056,2.90e-11,1;UBERON:0004535,6.48e-11,23;UBERON:0001009,6.48e-11,23;UBERON:0001374,1.12e-10,1;UBERON:0004252,1.12e-10,1;UBERON:0003663,1.12e-10,1;UBERON:0005090,1.12e-10,1;UBERON:0001630,1.12e-10,1;UBERON:0003661,1.12e-10,1;UBERON:0010890,1.12e-10,1;UBERON:0001383,1.12e-10,1;UBERON:0001444,1.50e-08,11;UBERON:0003103,2.93e-08,43;UBERON:0000020,6.91e-08,12;UBERON:0001032,6.91e-08,12;UBERON:0004456,6.91e-08,12;UBERON:0004872,1.23e-07,33;UBERON:0000033,2.53e-07,13|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.662524555381181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,1.26265113531884,0,0,0,0,0,0,0,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0,0.116765342367169,0.16455984991348,2.13417703302824,3.40489000092594,2.04679982395465,3.95190207523891,1.8788898626452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,2.26730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0.231867835620421|short_description=p8@Lrtm1}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=319476 | |||
|HGNC= | |||
|MCL_coexpression_id=10 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BXQ3,A6H6T2 | |||
|association_with_transcript=28bp_to_ENSMUST00000055662,NM_176920,uc007suj.2,uc007suk.2_5end | |||
|cluster_id=chr14:29831422..29831429,+ | |||
|description=CAGE_peak_8_at_Lrtm1_5end | |||
|id=chr14:29831422..29831429,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007100!3.33e-10!18;UBERON:0000948!3.33e-10!18;UBERON:0005498!3.33e-10!18;UBERON:0004140!3.33e-10!18;UBERON:0009881!3.33e-10!18;UBERON:0004141!3.33e-10!18;UBERON:0003084!3.33e-10!18;UBERON:0007005!3.33e-10!18;UBERON:0004139!3.33e-10!18;UBERON:0004291!3.33e-10!18;UBERON:0004535!1.06e-07!23;UBERON:0001009!1.06e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,6.71e-14,18;UBERON:0000948,6.71e-14,18;UBERON:0005498,6.71e-14,18;UBERON:0004140,6.71e-14,18;UBERON:0009881,6.71e-14,18;UBERON:0004141,6.71e-14,18;UBERON:0003084,6.71e-14,18;UBERON:0007005,6.71e-14,18;UBERON:0004139,6.71e-14,18;UBERON:0004291,6.71e-14,18;UBERON:0001723,2.90e-11,1;UBERON:0001033,2.90e-11,1;UBERON:0010056,2.90e-11,1;UBERON:0004535,6.48e-11,23;UBERON:0001009,6.48e-11,23;UBERON:0001374,1.12e-10,1;UBERON:0004252,1.12e-10,1;UBERON:0003663,1.12e-10,1;UBERON:0005090,1.12e-10,1;UBERON:0001630,1.12e-10,1;UBERON:0003661,1.12e-10,1;UBERON:0010890,1.12e-10,1;UBERON:0001383,1.12e-10,1;UBERON:0001444,1.50e-08,11;UBERON:0003103,2.93e-08,43;UBERON:0000020,6.91e-08,12;UBERON:0001032,6.91e-08,12;UBERON:0004456,6.91e-08,12;UBERON:0004872,1.23e-07,33;UBERON:0000033,2.53e-07,13 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0.662524555381181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.124406970610093,0,1.26265113531884,0,0,0,0,0,0,0,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.465067889500816,0,0.116765342367169,0.16455984991348,2.13417703302824,3.40489000092594,2.04679982395465,3.95190207523891,1.8788898626452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0.179397413521912,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0,0,0,0,1.26235463602186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165306911450672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,2.26730383615211,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187283014939765,0,0.114870937911227,0,0.115884325944855,0.192909220463705,0,0,0,0,0,0,0,0.169229215783353,0,0,0,0,0.237270036248348,0,0,0,0.192906610981141,0,0,0,0.191288332068843,0,0.231867835620421 | |||
|short_description=p8@Lrtm1 | |||
}} |
Latest revision as of 20:31, 25 September 2015
Short description: | p8@Lrtm1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_Lrtm1_5end |
Coexpression cluster: | MCL_coexpression_mm9:10 |
Association with transcript: | 28bp_to_ENSMUST00000055662, NM_176920, uc007suj.2, uc007suk.2_5end |
EntrezGene: | Lrtm1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 6.71e-14 | 18 |
heart | 6.71e-14 | 18 |
primitive heart tube | 6.71e-14 | 18 |
primary heart field | 6.71e-14 | 18 |
anterior lateral plate mesoderm | 6.71e-14 | 18 |
heart tube | 6.71e-14 | 18 |
heart primordium | 6.71e-14 | 18 |
cardiac mesoderm | 6.71e-14 | 18 |
cardiogenic plate | 6.71e-14 | 18 |
heart rudiment | 6.71e-14 | 18 |
tongue | 2.90e-11 | 1 |
gustatory system | 2.90e-11 | 1 |
future tongue | 2.90e-11 | 1 |
cardiovascular system | 6.48e-11 | 23 |
circulatory system | 6.48e-11 | 23 |
biceps femoris | 1.12e-10 | 1 |
hindlimb stylopod muscle | 1.12e-10 | 1 |
hindlimb muscle | 1.12e-10 | 1 |
muscle structure | 1.12e-10 | 1 |
muscle organ | 1.12e-10 | 1 |
limb muscle | 1.12e-10 | 1 |
pelvic complex muscle | 1.12e-10 | 1 |
muscle of leg | 1.12e-10 | 1 |
subdivision of head | 1.50e-08 | 11 |
compound organ | 2.93e-08 | 43 |
sense organ | 6.91e-08 | 12 |
sensory system | 6.91e-08 | 12 |
entire sense organ system | 6.91e-08 | 12 |
splanchnic layer of lateral plate mesoderm | 1.23e-07 | 33 |
head | 2.53e-07 | 13 |