FFCP PHASE1:Mm9::chr10:20444771..20444801,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=29863 | |EntrezGene=29863 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=36bp_to_ENSMUST00000166147,ENSMUST00000170683_5end | |association_with_transcript=36bp_to_ENSMUST00000166147,ENSMUST00000170683_5end | ||
|cluster_id=chr10:20444771..20444801,- | |||
|description=CAGE_peak_4_at_Pde7b_5end | |description=CAGE_peak_4_at_Pde7b_5end | ||
|id=chr10:20444771..20444801,- | |id=chr10:20444771..20444801,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!3.74e-10!102;UBERON:0000924!3.74e-10!102;UBERON:0006601!3.74e-10!102;UBERON:0000033!8.80e-10!63;UBERON:0000468!3.14e-08!333;UBERON:0004111!4.51e-08!122;UBERON:0002346!2.07e-07!71;UBERON:0003075!2.07e-07!71;UBERON:0007284!2.07e-07!71;UBERON:0001017!2.34e-07!73;UBERON:0005743!2.34e-07!73;UBERON:0000073!4.18e-07!75;UBERON:0001016!4.18e-07!75;UBERON:0003056!7.94e-07!49 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004121,1.78e-12,95;UBERON:0000924,1.78e-12,95;UBERON:0006601,1.78e-12,95;UBERON:0010371,2.56e-10,73;UBERON:0010314,1.68e-09,92;UBERON:0002346,7.53e-09,64;UBERON:0003075,7.53e-09,64;UBERON:0007284,7.53e-09,64;UBERON:0001017,1.03e-08,73;UBERON:0001016,4.94e-08,75;UBERON:0004111,1.13e-07,122;UBERON:0002021,9.52e-07,10;UBERON:0000411,9.52e-07,10;UBERON:0001950,9.52e-07,10 | |||
|phase1_expression=3.04282809499109,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0.7813353445238,0,0,0,0,0.629484089877886,1.01376931219515,4.22157529971868,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0.899899717281399,0.988866362566974,0,0,0,0.207379224616955,0.135005938331691,0.420649922702764,2.85650984403804,1.76694832761291,0.244981598429908,0.0958454710182364,0,17.6185409599022,6.51205424234457,6.45147439676223,0.395658863190582,0.182975287204819,0,5.58365998002762,3.93933827022176,4.43114918552749,1.17851434189467,2.27794689278565,0.372798891650601,0.605809546665472,0.453429360640713,0,0,0,2.15881276655127,0.649776417447669,1.34408066129201,2.66844398250329,0,0,0,1.69012103732017,0,0,0,0,0,0,1.94112595522402,2.84831672011889,0.742210695324124,0.173485326766136,0,0.691846491768175,0.452167921657868,1.29347577849275,0.879666139307728,0.247194967734374,3.03658649531814,3.5384422077995,4.69123864847487,6.62524555381181,6.30337829075789,0,2.34224637609238,2.51336048176146,0.766371165625774,0.239630249011841,0,0.381210681219194,5.69204429738326,5.03250663100489,1.25654352112864,5.38855392596057,4.09144731728529,4.77912502486988,5.19172041816825,1.2220723662038,4.60305791257344,2.0217820674694,9.04899980311838,1.69156575851515,0.689706313300419,2.34080768746954,2.41127708537144,2.78949646520444,6.14945857367279,6.74652416830048,6.72628763921441,0.215567992932842,0.945530400839096,0.527853372491847,0.219195732427575,1.66828349535359,1.0447564995665,0.823128545631774,0.199034266818493,0.702213187313235,0,0.284163499395593,1.44988040774851,3.04883877975425,1.44049649168812,0.946978942340841,2.36117078096885,1.23413690309903,1.86027155800326,1.3413670069981,0.934122738937356,2.30383789878873,4.26835406605648,7.21512404958116,5.55559952216263,5.70830299756732,5.09984391289413,3.99550902271842,0.514523061896422,0,0.528901133327089,0.426576501070468,0.232236671860439,1.03093969057675,0.80673409849337,0.667134131534611,0.380451252225118,0.474529061544512,0.658795818896044,1.50801125280162,0.994782360205754,1.55971269695296,0,1.08069024937347,1.7922714592893,0.379335801906163,0.799739588268102,0,1.22190796707189,1.93952487167626,1.82353131714828,3.47800954183415,2.65698266363284,3.767969468193,4.44229790118482,0.889357881261447,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.324270453550071,0.274561413188081,1.43768206527355,0.744281895337007,3.43241440426017,2.27320990152401,2.33216637578486,0.482443521363367,2.21703828199926,0.189491411770485,0.488894929326078,0.678980343100753,0.704070744865506,1.00503754465089,1.19021820443007,2.53673742215138,2.36452716159286,2.6575762757853,3.82691444777969,2.13022309130459,4.66249451037918,4.19482269886384,3.01582567878545,1.08781136763742,1.96705709207614,1.37968373152366,3.05046120976805,3.39913891117389,0,14.3908428506493,2.83957397474631,3.12350995437311,5.60100834105277,4.06246956519338,4.67877215573028,5.09537755419898,5.66734982344852,7.3063964477828,5.13874111330481,3.85585579706168,4.11626247103979,0.178065603667255,0.488660878060728,2.14461159864296,1.32745138339963,0.242780636154981,0.302323556964751,0.377210159511796,0,0.307435147943927,0.516856586336442,1.45413491791002,0.712994756769443,0.316036757935816,0,1.03135543248187,5.44703369206061,0.900305470156551,0.258717367565509,1.92903331528433,0.354680467284547,1.96205699362278,1.97458824722545,1.522324745573,0.23467170806371,0,1.32317038832977,3.46261131177108,1.77610869365496,1.62844897306021,1.55184047204077,1.64140899745061,0.291480836629851,5.56275906031529,0,0.412773735926445,0.555583582109135,0.565105371014073,0,0,0,0.279902904647316,0.138199973804424,0.954670618015114,0.158167996790568,0.609958401380546,0.432021363287205,1.25452977608681,0.218362563746178,0.944050424693745,2.39695021603474,2.09404753587224,2.46268449254406,3.10669656543463,0,0,0.165458490457098,0.777804753376191,0.129159823477731,0.506868376472335,0.58678619322877,0.911430693907651,0.629156066554265,0,0.864090018773596,0,0.405450430580328,0.308132871494482,0,0,0,0,0.147689527174577,0.302899349844443,0.15241361331,0,0.0974578807397524,0,0.116876902181569,6.80191150845634,0,0,0,4.056981474676,1.50145980360946,3.47988086107804,1.2862102744744,3.00943262421218,3.3885110557024,3.22227665555024,3.43737308063638,5.15559547031063,4.7955776383945,4.5323633843382,4.05013500139084,4.5032120322422,7.25027854374727,4.65984280576638,0.103787347584177,0.798049746802062,0.512200817262403,0.729320151204882,0,1.2869045591501,2.66696073361938,1.64828045791115,1.28367683836726,2.27427490587418,1.2673964994512,2.64076877940507,2.71560371662659,1.85672941974121,2.46972516509137,0.952587382566147,1.73826488917283,1.92909220463705,1.64834360321323,1.47198920134397,3.42869252385415,2.30718548007139,1.43061713968393,2.0348498328526,1.97629698872194,1.26921911837515,2.0122077016005,2.36762740294059,2.71608227691724,1.12228454331548,2.13543032623513,2.56111654176465,0,2.01417893541756,3.2794123866794,2.49810577937946,1.87145286756327,3.22306581072447,2.29545998482612,4.63241980150983,8.11537424671475 | |phase1_expression=3.04282809499109,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0,0,0.7813353445238,0,0,0,0,0.629484089877886,1.01376931219515,4.22157529971868,0,0,0,0.194429899074283,0,0,0,0,0,0,0,0,0.202316460859598,0,0,0,0,0.899899717281399,0.988866362566974,0,0,0,0.207379224616955,0.135005938331691,0.420649922702764,2.85650984403804,1.76694832761291,0.244981598429908,0.0958454710182364,0,17.6185409599022,6.51205424234457,6.45147439676223,0.395658863190582,0.182975287204819,0,5.58365998002762,3.93933827022176,4.43114918552749,1.17851434189467,2.27794689278565,0.372798891650601,0.605809546665472,0.453429360640713,0,0,0,2.15881276655127,0.649776417447669,1.34408066129201,2.66844398250329,0,0,0,1.69012103732017,0,0,0,0,0,0,1.94112595522402,2.84831672011889,0.742210695324124,0.173485326766136,0,0.691846491768175,0.452167921657868,1.29347577849275,0.879666139307728,0.247194967734374,3.03658649531814,3.5384422077995,4.69123864847487,6.62524555381181,6.30337829075789,0,2.34224637609238,2.51336048176146,0.766371165625774,0.239630249011841,0,0.381210681219194,5.69204429738326,5.03250663100489,1.25654352112864,5.38855392596057,4.09144731728529,4.77912502486988,5.19172041816825,1.2220723662038,4.60305791257344,2.0217820674694,9.04899980311838,1.69156575851515,0.689706313300419,2.34080768746954,2.41127708537144,2.78949646520444,6.14945857367279,6.74652416830048,6.72628763921441,0.215567992932842,0.945530400839096,0.527853372491847,0.219195732427575,1.66828349535359,1.0447564995665,0.823128545631774,0.199034266818493,0.702213187313235,0,0.284163499395593,1.44988040774851,3.04883877975425,1.44049649168812,0.946978942340841,2.36117078096885,1.23413690309903,1.86027155800326,1.3413670069981,0.934122738937356,2.30383789878873,4.26835406605648,7.21512404958116,5.55559952216263,5.70830299756732,5.09984391289413,3.99550902271842,0.514523061896422,0,0.528901133327089,0.426576501070468,0.232236671860439,1.03093969057675,0.80673409849337,0.667134131534611,0.380451252225118,0.474529061544512,0.658795818896044,1.50801125280162,0.994782360205754,1.55971269695296,0,1.08069024937347,1.7922714592893,0.379335801906163,0.799739588268102,0,1.22190796707189,1.93952487167626,1.82353131714828,3.47800954183415,2.65698266363284,3.767969468193,4.44229790118482,0.889357881261447,0.166845105716094,0.196558995113203,0,0.202860121388503,0,0,0,0.324270453550071,0.274561413188081,1.43768206527355,0.744281895337007,3.43241440426017,2.27320990152401,2.33216637578486,0.482443521363367,2.21703828199926,0.189491411770485,0.488894929326078,0.678980343100753,0.704070744865506,1.00503754465089,1.19021820443007,2.53673742215138,2.36452716159286,2.6575762757853,3.82691444777969,2.13022309130459,4.66249451037918,4.19482269886384,3.01582567878545,1.08781136763742,1.96705709207614,1.37968373152366,3.05046120976805,3.39913891117389,0,14.3908428506493,2.83957397474631,3.12350995437311,5.60100834105277,4.06246956519338,4.67877215573028,5.09537755419898,5.66734982344852,7.3063964477828,5.13874111330481,3.85585579706168,4.11626247103979,0.178065603667255,0.488660878060728,2.14461159864296,1.32745138339963,0.242780636154981,0.302323556964751,0.377210159511796,0,0.307435147943927,0.516856586336442,1.45413491791002,0.712994756769443,0.316036757935816,0,1.03135543248187,5.44703369206061,0.900305470156551,0.258717367565509,1.92903331528433,0.354680467284547,1.96205699362278,1.97458824722545,1.522324745573,0.23467170806371,0,1.32317038832977,3.46261131177108,1.77610869365496,1.62844897306021,1.55184047204077,1.64140899745061,0.291480836629851,5.56275906031529,0,0.412773735926445,0.555583582109135,0.565105371014073,0,0,0,0.279902904647316,0.138199973804424,0.954670618015114,0.158167996790568,0.609958401380546,0.432021363287205,1.25452977608681,0.218362563746178,0.944050424693745,2.39695021603474,2.09404753587224,2.46268449254406,3.10669656543463,0,0,0.165458490457098,0.777804753376191,0.129159823477731,0.506868376472335,0.58678619322877,0.911430693907651,0.629156066554265,0,0.864090018773596,0,0.405450430580328,0.308132871494482,0,0,0,0,0.147689527174577,0.302899349844443,0.15241361331,0,0.0974578807397524,0,0.116876902181569,6.80191150845634,0,0,0,4.056981474676,1.50145980360946,3.47988086107804,1.2862102744744,3.00943262421218,3.3885110557024,3.22227665555024,3.43737308063638,5.15559547031063,4.7955776383945,4.5323633843382,4.05013500139084,4.5032120322422,7.25027854374727,4.65984280576638,0.103787347584177,0.798049746802062,0.512200817262403,0.729320151204882,0,1.2869045591501,2.66696073361938,1.64828045791115,1.28367683836726,2.27427490587418,1.2673964994512,2.64076877940507,2.71560371662659,1.85672941974121,2.46972516509137,0.952587382566147,1.73826488917283,1.92909220463705,1.64834360321323,1.47198920134397,3.42869252385415,2.30718548007139,1.43061713968393,2.0348498328526,1.97629698872194,1.26921911837515,2.0122077016005,2.36762740294059,2.71608227691724,1.12228454331548,2.13543032623513,2.56111654176465,0,2.01417893541756,3.2794123866794,2.49810577937946,1.87145286756327,3.22306581072447,2.29545998482612,4.63241980150983,8.11537424671475 | ||
|short_description=p4@Pde7b | |short_description=p4@Pde7b | ||
}} | }} |
Latest revision as of 21:09, 25 September 2015
Short description: | p4@Pde7b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Pde7b_5end |
Coexpression cluster: | NA |
Association with transcript: | 36bp_to_ENSMUST00000166147, ENSMUST00000170683_5end |
EntrezGene: | Pde7b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectoderm-derived structure | 1.78e-12 | 95 |
ectoderm | 1.78e-12 | 95 |
presumptive ectoderm | 1.78e-12 | 95 |
ecto-epithelium | 2.56e-10 | 73 |
structure with developmental contribution from neural crest | 1.68e-09 | 92 |
neurectoderm | 7.53e-09 | 64 |
neural plate | 7.53e-09 | 64 |
presumptive neural plate | 7.53e-09 | 64 |
central nervous system | 1.03e-08 | 73 |
nervous system | 4.94e-08 | 75 |
anatomical conduit | 1.13e-07 | 122 |
occipital lobe | 9.52e-07 | 10 |
visual cortex | 9.52e-07 | 10 |
neocortex | 9.52e-07 | 10 |