Personal tools

FFCP PHASE1:Mm9::chr19:46576205..46576223,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=93679
|EntrezGene=93679
|HGNC=
|HGNC=
|MCL_coexpression_id=3203
|MCL_coexpression_id=3203
|TSSclassifier=NA
|UniProt=Q99PJ2
|UniProt=Q99PJ2
|association_with_transcript=67bp_to_ENSMUST00000026008,NM_053100,uc008hts.1_5end
|association_with_transcript=67bp_to_ENSMUST00000026008,NM_053100,uc008hts.1_5end
|cluster_id=chr19:46576205..46576223,+
|description=CAGE_peak_2_at_Trim8_5end
|description=CAGE_peak_2_at_Trim8_5end
|id=chr19:46576205..46576223,+
|id=chr19:46576205..46576223,+
|ontology_enrichment_celltype=CL:0000219!2.40e-08!54;CL:0000144!2.56e-07!121;CL:0000012!2.56e-07!121;CL:0000063!4.37e-07!66;CL:0002371!5.29e-07!118
|ontology_enrichment_celltype=CL:0000219!2.40e-08!54;CL:0000144!2.56e-07!121;CL:0000012!2.56e-07!121;CL:0000063!4.37e-07!66;CL:0002371!5.29e-07!118
|ontology_enrichment_celltype_v019_2=CL:0000219,1.41e-08,54
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon=
|ontology_enrichment_uberon_v019_2=
|phase1_expression=0.480446541314382,10.1202868215415,13.1949779422965,3.93203474698879,9.5170188689806,5.54001597309236,3.50418960893289,7.23090611272827,13.093351160105,16.8526458951835,2.22583358693156,3.11111420081812,3.25281386869291,4.89554253546385,2.6648780945253,1.61980213911861,1.39912375625629,2.5236973228659,3.29074640653773,0.84877930359606,3.48677489619386,2.58156473122302,1.82839852397255,2.87986361028132,3.44113921600755,4.01962374880514,3.4460959692726,4.74036711908956,2.66032787238923,1.00812051903972,2.88249663851896,6.35030673459631,6.1506478758457,0,1.1554064790051,0.498703936075477,0.816677425049476,4.60384793810598,3.906676722619,3.14114246384279,5.29408339227913,4.09827290975067,3.88408282424923,0.755380907853464,0.608261587317087,2.0190142737785,1.56478268869608,3.70642765846759,6.15121311656521,3.11087838518853,4.61955191363696,2.87505128729943,2.51673909086605,4.35217285206807,1.68046899571232,1.28629718017973,2.29226751951005,4.12537673821954,1.41621522601718,1.5869729378161,1.26766280701236,4.74382344896785,6.22506357277798,9.44894703145469,6.92206453796882,12.0781619540837,7.49000276296012,5.37905627450176,1.03689612308478,0.675029691658453,0.420649922702764,1.99955689082663,4.19650227808066,1.46988959057945,1.0543001812006,0.919218786610021,8.8092704799511,3.06449611404451,3.5329502648936,1.58263545276233,1.18933936683133,1.04182674111352,3.35019598801657,2.25105044012672,4.12555268997387,2.06240009831567,1.42371680799103,1.1183966749518,5.07365495332333,3.92972112555285,2.31891590961342,2.58127163094416,9.51959867190851,1.07940638327563,0.649776417447669,1.79210754838934,2.52799956237153,3.2381761289831,2.59786004602869,4.24007489412408,1.83096445709685,0,2.54805239706646,0,2.16491041011214,3.54703811665138,4.04419556011827,2.05530983494308,1.03575153458869,3.11728492036132,1.73485326766136,0.913396434936424,2.53677046981664,1.20578112442098,2.3517741427141,2.51333182659351,1.97755974187499,1.01219549843938,0.884610551949874,1.61766849947409,2.65009822152472,1.93950101254089,1.86391761218122,2.63502717310392,4.60782754989601,3.32094171771169,2.63593273913025,2.39961092397363,2.03312363316904,3.74476598512057,2.28750301409313,0.502617408451458,1.04294592115366,1.53429274398198,2.90903262383384,2.27137768294861,1.83310854930569,2.11491850037158,1.26361379216837,1.26265113531884,0.780722657776222,0.689706313300419,0.900310649026746,1.50704817835715,0.95251098811859,1.2811372028485,1.59292931751539,1.29351685369508,0.862271971731369,0.756424320671277,0.703804496655795,1.97276159184817,1.39023624612799,1.74126083261083,0.823128545631774,1.59227413454795,0.702213187313235,0.257347907114715,3.12579849335152,3.31401236056803,1.40715635988658,0.900310307305074,1.42046841351126,1.57411385397923,1.3884040159864,0.232533944750408,3.21928081679543,2.10177616260905,2.63295759861569,1.64167464079095,2.35099547682982,3.07019973593198,1.97595103761946,1.74468344388483,1.89260953707715,1.13195073617213,1.32167513193519,3.70230793328962,0.213288250535234,1.16118335930219,1.67527699718721,2.42020229548011,2.2237804384487,2.09248188723815,3.32170343081158,2.47048432086016,1.75934646160189,1.79060824837036,2.53453313254856,3.59527763461689,1.72910439899755,1.39398891278057,0.948339504765408,1.82797620175566,1.1270773567308,1.62921062276251,1.74557238450863,2.73529697572242,3.28829993046138,3.98547399544926,2.98297582898612,3.20832626196681,3.55743152504579,2.8363667971736,1.96558995113203,1.79889689907883,2.02860121388503,3.13530307678142,2.29163266603278,3.45235364940973,2.59416362840057,1.37280706594041,0,2.23284568601102,1.5601883655728,3.28352541331245,1.79397413521912,4.3419916922703,2.21703828199926,0.568474235311454,1.14075483509418,0.848725428875941,1.87752198630802,3.1826188913945,6.66522194480839,5.85400943573396,1.26108115284953,1.99318220683897,4.62418829106713,3.11340297959902,3.62638461918381,3.90552458170081,9.04747703635634,4.89515115436839,4.42587845717133,2.20749397043786,1.44495530989013,2.22702204525186,1.47541450839008,0.757412781613119,1.57754109708128,1.95219372148319,0.215423397732799,3.34556317133573,1.78238939265915,1.13230612315533,2.42886421004937,2.63030272120181,2.37172666767914,1.92792789853084,2.6968616189571,1.95872164033981,1.95464351224291,1.97964147567043,1.32745138339963,0.485561272309963,0.604647113929502,2.26326095707078,3.2483208216885,2.45948118355142,2.06742634534577,1.81766864738753,1.06949213515416,2.84433082142234,2.10837217149998,7.21948802737308,1.02131881726136,1.26042765821917,1.29358683782755,1.28602221018955,1.06404140185364,2.49716344642899,1.48094118541909,2.74018454203139,2.11204537257339,5.08396970073168,2.20528398054962,0.8244312647074,1.45317984026315,1.02531972377865,1.79058516004705,1.31312719796049,2.33184669303881,1.29797711407357,1.87957968877638,2.68302928352189,2.77791791054568,1.69531611304222,1.77702496037333,2.97411625168479,2.54967644990783,2.09927178485487,2.62579950228405,2.86401185404534,0.790839983952838,0.406638934253697,1.94409613479242,1.25452977608681,0.655087691238533,1.48350781023303,1.48776220305605,3.92633912976044,1.55537967950151,3.72803587852155,1.12738587736838,1.34564891439581,0.992750942742586,0.777804753376191,1.29159823477731,0.337912250981556,1.05621514781179,1.5624526181274,1.15345278868282,0,0.288030006257865,1.26404448251271,0.810900861160657,1.33524244314275,1.42912905275575,1.9692936523423,1.19208812868759,0.841368146639782,1.32920574457119,0.504832249740738,0.914481679859998,0.504130925684203,1.07203668813728,2.79014340756955,1.28564592399726,0.680191150845634,2.21985953374065,2.78112955489375,1.67884616364078,1.9318959403219,2.25218970541418,1.46521299413812,4.50173596066038,0.501572104035363,1.12950368523413,2.76195141904306,1.71868654031819,2.06223818812425,2.74033007908257,1.5107877947794,2.70009000092722,2.70192721934532,0.453142408984205,0.51776031175182,0.726511433089237,0.399024873401031,0.341467211508268,2.43106717068294,0.838452650511929,2.5738091183002,1.33348036680969,1.85431551515005,1.28367683836726,1.01078884705519,1.52087579934144,1.32038438970253,1.31098110457835,1.79270426733634,1.32101578597911,1.42888107384922,2.66533949673168,2.12200142510076,1.23625770240992,1.76638704161277,1.02860775715625,1.24233064311536,0.953744759789284,0.872078499793971,1.03520318456864,0.761531471025089,1.46342378298218,1.05227884575137,1.49384525230448,1.12228454331548,1.89816028998679,1.87158516513571,1.63692417267876,1.70430525304563,1.92906610981141,0.749431733813838,1.16965804222704,0.644613162144895,2.10417165275728,1.98532277207564,1.39120701372253
|phase1_expression=0.480446541314382,10.1202868215415,13.1949779422965,3.93203474698879,9.5170188689806,5.54001597309236,3.50418960893289,7.23090611272827,13.093351160105,16.8526458951835,2.22583358693156,3.11111420081812,3.25281386869291,4.89554253546385,2.6648780945253,1.61980213911861,1.39912375625629,2.5236973228659,3.29074640653773,0.84877930359606,3.48677489619386,2.58156473122302,1.82839852397255,2.87986361028132,3.44113921600755,4.01962374880514,3.4460959692726,4.74036711908956,2.66032787238923,1.00812051903972,2.88249663851896,6.35030673459631,6.1506478758457,0,1.1554064790051,0.498703936075477,0.816677425049476,4.60384793810598,3.906676722619,3.14114246384279,5.29408339227913,4.09827290975067,3.88408282424923,0.755380907853464,0.608261587317087,2.0190142737785,1.56478268869608,3.70642765846759,6.15121311656521,3.11087838518853,4.61955191363696,2.87505128729943,2.51673909086605,4.35217285206807,1.68046899571232,1.28629718017973,2.29226751951005,4.12537673821954,1.41621522601718,1.5869729378161,1.26766280701236,4.74382344896785,6.22506357277798,9.44894703145469,6.92206453796882,12.0781619540837,7.49000276296012,5.37905627450176,1.03689612308478,0.675029691658453,0.420649922702764,1.99955689082663,4.19650227808066,1.46988959057945,1.0543001812006,0.919218786610021,8.8092704799511,3.06449611404451,3.5329502648936,1.58263545276233,1.18933936683133,1.04182674111352,3.35019598801657,2.25105044012672,4.12555268997387,2.06240009831567,1.42371680799103,1.1183966749518,5.07365495332333,3.92972112555285,2.31891590961342,2.58127163094416,9.51959867190851,1.07940638327563,0.649776417447669,1.79210754838934,2.52799956237153,3.2381761289831,2.59786004602869,4.24007489412408,1.83096445709685,0,2.54805239706646,0,2.16491041011214,3.54703811665138,4.04419556011827,2.05530983494308,1.03575153458869,3.11728492036132,1.73485326766136,0.913396434936424,2.53677046981664,1.20578112442098,2.3517741427141,2.51333182659351,1.97755974187499,1.01219549843938,0.884610551949874,1.61766849947409,2.65009822152472,1.93950101254089,1.86391761218122,2.63502717310392,4.60782754989601,3.32094171771169,2.63593273913025,2.39961092397363,2.03312363316904,3.74476598512057,2.28750301409313,0.502617408451458,1.04294592115366,1.53429274398198,2.90903262383384,2.27137768294861,1.83310854930569,2.11491850037158,1.26361379216837,1.26265113531884,0.780722657776222,0.689706313300419,0.900310649026746,1.50704817835715,0.95251098811859,1.2811372028485,1.59292931751539,1.29351685369508,0.862271971731369,0.756424320671277,0.703804496655795,1.97276159184817,1.39023624612799,1.74126083261083,0.823128545631774,1.59227413454795,0.702213187313235,0.257347907114715,3.12579849335152,3.31401236056803,1.40715635988658,0.900310307305074,1.42046841351126,1.57411385397923,1.3884040159864,0.232533944750408,3.21928081679543,2.10177616260905,2.63295759861569,1.64167464079095,2.35099547682982,3.07019973593198,1.97595103761946,1.74468344388483,1.89260953707715,1.13195073617213,1.32167513193519,3.70230793328962,0.213288250535234,1.16118335930219,1.67527699718721,2.42020229548011,2.2237804384487,2.09248188723815,3.32170343081158,2.47048432086016,1.75934646160189,1.79060824837036,2.53453313254856,3.59527763461689,1.72910439899755,1.39398891278057,0.948339504765408,1.82797620175566,1.1270773567308,1.62921062276251,1.74557238450863,2.73529697572242,3.28829993046138,3.98547399544926,2.98297582898612,3.20832626196681,3.55743152504579,2.8363667971736,1.96558995113203,1.79889689907883,2.02860121388503,3.13530307678142,2.29163266603278,3.45235364940973,2.59416362840057,1.37280706594041,0,2.23284568601102,1.5601883655728,3.28352541331245,1.79397413521912,4.3419916922703,2.21703828199926,0.568474235311454,1.14075483509418,0.848725428875941,1.87752198630802,3.1826188913945,6.66522194480839,5.85400943573396,1.26108115284953,1.99318220683897,4.62418829106713,3.11340297959902,3.62638461918381,3.90552458170081,9.04747703635634,4.89515115436839,4.42587845717133,2.20749397043786,1.44495530989013,2.22702204525186,1.47541450839008,0.757412781613119,1.57754109708128,1.95219372148319,0.215423397732799,3.34556317133573,1.78238939265915,1.13230612315533,2.42886421004937,2.63030272120181,2.37172666767914,1.92792789853084,2.6968616189571,1.95872164033981,1.95464351224291,1.97964147567043,1.32745138339963,0.485561272309963,0.604647113929502,2.26326095707078,3.2483208216885,2.45948118355142,2.06742634534577,1.81766864738753,1.06949213515416,2.84433082142234,2.10837217149998,7.21948802737308,1.02131881726136,1.26042765821917,1.29358683782755,1.28602221018955,1.06404140185364,2.49716344642899,1.48094118541909,2.74018454203139,2.11204537257339,5.08396970073168,2.20528398054962,0.8244312647074,1.45317984026315,1.02531972377865,1.79058516004705,1.31312719796049,2.33184669303881,1.29797711407357,1.87957968877638,2.68302928352189,2.77791791054568,1.69531611304222,1.77702496037333,2.97411625168479,2.54967644990783,2.09927178485487,2.62579950228405,2.86401185404534,0.790839983952838,0.406638934253697,1.94409613479242,1.25452977608681,0.655087691238533,1.48350781023303,1.48776220305605,3.92633912976044,1.55537967950151,3.72803587852155,1.12738587736838,1.34564891439581,0.992750942742586,0.777804753376191,1.29159823477731,0.337912250981556,1.05621514781179,1.5624526181274,1.15345278868282,0,0.288030006257865,1.26404448251271,0.810900861160657,1.33524244314275,1.42912905275575,1.9692936523423,1.19208812868759,0.841368146639782,1.32920574457119,0.504832249740738,0.914481679859998,0.504130925684203,1.07203668813728,2.79014340756955,1.28564592399726,0.680191150845634,2.21985953374065,2.78112955489375,1.67884616364078,1.9318959403219,2.25218970541418,1.46521299413812,4.50173596066038,0.501572104035363,1.12950368523413,2.76195141904306,1.71868654031819,2.06223818812425,2.74033007908257,1.5107877947794,2.70009000092722,2.70192721934532,0.453142408984205,0.51776031175182,0.726511433089237,0.399024873401031,0.341467211508268,2.43106717068294,0.838452650511929,2.5738091183002,1.33348036680969,1.85431551515005,1.28367683836726,1.01078884705519,1.52087579934144,1.32038438970253,1.31098110457835,1.79270426733634,1.32101578597911,1.42888107384922,2.66533949673168,2.12200142510076,1.23625770240992,1.76638704161277,1.02860775715625,1.24233064311536,0.953744759789284,0.872078499793971,1.03520318456864,0.761531471025089,1.46342378298218,1.05227884575137,1.49384525230448,1.12228454331548,1.89816028998679,1.87158516513571,1.63692417267876,1.70430525304563,1.92906610981141,0.749431733813838,1.16965804222704,0.644613162144895,2.10417165275728,1.98532277207564,1.39120701372253
|short_description=p2@Trim8
|short_description=p2@Trim8
}}
}}

Latest revision as of 21:21, 25 September 2015

Short description:p2@Trim8
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Trim8_5end
Coexpression cluster:MCL_coexpression_mm9:3203
Association with transcript: 67bp_to_ENSMUST00000026008, NM_053100, uc008hts.1_5end
EntrezGene:Trim8
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
5
10
15
20




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data