FFCP PHASE1:Mm9::chr8:87232404..87232415,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=18032 | |EntrezGene=18032 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |MCL_coexpression_id=42 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-287bp_to_ENSMUST00000148644_5end | |association_with_transcript=-287bp_to_ENSMUST00000148644_5end | ||
|cluster_id=chr8:87232404..87232415,- | |||
|description=CAGE_peak_22_at_Nfix_5end | |description=CAGE_peak_22_at_Nfix_5end | ||
|id=chr8:87232404..87232415,- | |id=chr8:87232404..87232415,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000878,9.50e-23,2;CL:0000129,9.50e-23,2;CL:0002194,4.02e-12,4;CL:0000766,4.02e-12,4;CL:0000234,4.02e-12,4;CL:0000576,4.02e-12,4;CL:0000235,4.02e-12,4;CL:0000864,4.02e-12,4;CL:0002009,4.02e-12,4;CL:0000040,4.02e-12,4;CL:0000559,4.02e-12,4;CL:0000473,1.64e-07,7;CL:0000557,1.64e-07,7;CL:0002453,9.78e-07,8 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,3.12e-12,4;UBERON:0002680,3.12e-12,4;UBERON:0001895,3.12e-12,4;UBERON:0010092,3.12e-12,4;UBERON:0006215,3.12e-12,4;UBERON:0004733,1.29e-08,6;UBERON:0004732,1.29e-08,6;UBERON:0002028,1.29e-08,6;UBERON:0007277,1.29e-08,6 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0,0,0,0.439372365468944,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,1.15265491596466,0.518448061542388,0.675029691658453,0.630974884054146,0.285650984403804,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0.722996784599558,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,4.60782754989601,0,0.11981512450592,0,0.127070227073065,0,0.457500602818626,0,0,0,0,0.324482526135515,0.101839363850316,0.497627882440372,0,0,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0.703804496655795,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0.473489471170421,0,0,0,0,0.116765342367169,0,0,0.324275238183423,0,0.219550115291051,0.134206418760372,0.210289948564127,0.823236899034275,0,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.210407459670956,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0.744281895337007,0,0,0,0.482443521363367,0.554259570499814,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0.195133647857799,0.630540576424764,0,0.478364305972461,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0.163934945376675,0.504941854408746,0,0,0.215423397732799,0,0.222798674082394,0,0,0.876767573733936,0.395287777946524,0,0,0.35613120733451,0.488660878060728,0.824850614862677,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0.220528398054962,0,0.161464426695906,0.301564624640779,0.238744688006273,0.164140899745061,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0,0.194451188344048,0,0,0.234714477291508,0.2604087696879,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.750729901804728,0.73260649706906,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.729320151204882,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0.765153328275374,0.220591419119515,0.463735671240843 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0,0,0,0.439372365468944,0.58328969722285,0.279972843250725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.599200221036809,1.15265491596466,0.518448061542388,0.675029691658453,0.630974884054146,0.285650984403804,0,0,0.0958454710182364,0,0,0,0.153606533256243,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.539703191637817,0,0,0.140444420131752,0,0.259786004602869,0,0,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0,0,0,0,0,0,0,0.722996784599558,0,0.161766849947409,0,0.484875253135222,0,0.292780797011547,4.60782754989601,0,0.11981512450592,0,0.127070227073065,0,0.457500602818626,0,0,0,0,0.324482526135515,0.101839363850316,0.497627882440372,0,0,0,0,0.180062129805349,0,0.0680364991513279,0.12811372028485,0,0.258703370739016,0,0,0.703804496655795,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0.36012412292203,0.473489471170421,0,0,0,0,0.116765342367169,0,0,0.324275238183423,0,0.219550115291051,0.134206418760372,0.210289948564127,0.823236899034275,0,0.264450566663544,0,0,0,0,0.22237804384487,0.190225626112559,0,0,0.251335208800269,0.198956472041151,0.19496408711912,0,0.216138049874694,0,0,0,0,0.203651327845314,0,0.210407459670956,0.189709611372772,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0.324270453550071,0,0,0.744281895337007,0,0,0,0.482443521363367,0.554259570499814,0,0,0.169745085775188,0.234690248288502,0,0.238043640886014,0.195133647857799,0.630540576424764,0,0.478364305972461,0.163863314715738,0.172684981865896,0.289298117163023,0,0,0,0,0,0,0.163934945376675,0.504941854408746,0,0,0.215423397732799,0,0.222798674082394,0,0,0.876767573733936,0.395287777946524,0,0,0.35613120733451,0.488660878060728,0.824850614862677,0,0,0,0,0.295301892880773,0,0,0,0.356497378384721,0.316036757935816,0,0,0.340439605753788,0,0,0,0.177340233642274,0.178368817602071,0,0,0,0,0.220528398054962,0,0.161464426695906,0.301564624640779,0.238744688006273,0.164140899745061,0.291480836629851,0.18542530201051,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0,0.108005340821801,0,0,0.269728692769641,0.0826534557253359,0.26175594198403,0.129614973291793,0.621339313086926,0,0,0,0.194451188344048,0,0,0.234714477291508,0.2604087696879,0.314578033277133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226730383615211,0,0,0,0.19318959403219,0.750729901804728,0.73260649706906,0.214368379079066,0,0.564751842617067,0.460325236507177,0,0,0,0,0,0,0,0,0.103787347584177,0,0,0.729320151204882,0,0,0,0,0,0,0.25347929989024,0,0,0.0640251524048693,0,0,0,0,0,0,0.342869252385415,0.177475806159338,0,0,0.0941093804153306,0.0846146078916765,0,0.263069711437843,0,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0,0.765153328275374,0.220591419119515,0.463735671240843 | ||
|short_description=p22@Nfix | |short_description=p22@Nfix | ||
}} | }} |
Latest revision as of 21:41, 25 September 2015
Short description: | p22@Nfix |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_22_at_Nfix_5end |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | -287bp_to_ENSMUST00000148644_5end |
EntrezGene: | Nfix |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 9.50e-23 | 2 |
microglial cell | 9.50e-23 | 2 |
monopoietic cell | 4.02e-12 | 4 |
myeloid leukocyte | 4.02e-12 | 4 |
phagocyte | 4.02e-12 | 4 |
monocyte | 4.02e-12 | 4 |
macrophage | 4.02e-12 | 4 |
tissue-resident macrophage | 4.02e-12 | 4 |
macrophage dendritic cell progenitor | 4.02e-12 | 4 |
monoblast | 4.02e-12 | 4 |
promonocyte | 4.02e-12 | 4 |
defensive cell | 1.64e-07 | 7 |
granulocyte monocyte progenitor cell | 1.64e-07 | 7 |
oligodendrocyte precursor cell | 9.78e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 3.12e-12 | 4 |
regional part of metencephalon | 3.12e-12 | 4 |
metencephalon | 3.12e-12 | 4 |
future metencephalon | 3.12e-12 | 4 |
rhombic lip | 3.12e-12 | 4 |
segmental subdivision of hindbrain | 1.29e-08 | 6 |
segmental subdivision of nervous system | 1.29e-08 | 6 |
hindbrain | 1.29e-08 | 6 |
presumptive hindbrain | 1.29e-08 | 6 |