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FFCP PHASE1:Mm9::chr2:151907546..151907561,+: Difference between revisions

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{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=545474
|EntrezGene=545474
|HGNC=
|HGNC=
|MCL_coexpression_id=22
|TSSclassifier=NA
|UniProt=Q8BTH6
|UniProt=Q8BTH6
|association_with_transcript=281bp_to_ENSMUST00000064061,NM_001160410,uc012cgb.1_5end
|association_with_transcript=281bp_to_ENSMUST00000064061,NM_001160410,uc012cgb.1_5end
|cluster_id=chr2:151907546..151907561,+
|description=CAGE_peak_1_at_Scrt2_5end
|description=CAGE_peak_1_at_Scrt2_5end
|id=chr2:151907546..151907561,+
|id=chr2:151907546..151907561,+
|ontology_enrichment_celltype=CL:0000117!6.92e-19!23;CL:0000337!6.92e-19!23;CL:0000540!8.29e-13!33;CL:0000047!8.29e-13!33;CL:0000031!8.29e-13!33;CL:0000404!8.29e-13!33;CL:0000221!1.19e-10!44;CL:0000133!1.19e-10!44;CL:0002319!3.13e-10!43;CL:0000393!2.58e-09!39;CL:0000211!2.58e-09!39;CL:0000055!2.19e-07!50;CL:0002609!7.88e-07!6
|ontology_enrichment_celltype=CL:0000117!6.92e-19!23;CL:0000337!6.92e-19!23;CL:0000540!8.29e-13!33;CL:0000047!8.29e-13!33;CL:0000031!8.29e-13!33;CL:0000404!8.29e-13!33;CL:0000221!1.19e-10!44;CL:0000133!1.19e-10!44;CL:0002319!3.13e-10!43;CL:0000393!2.58e-09!39;CL:0000211!2.58e-09!39;CL:0000055!2.19e-07!50;CL:0002609!7.88e-07!6
|ontology_enrichment_celltype_v019_2=CL:0000117,1.92e-23,23;CL:0000337,1.92e-23,23;CL:0000540,8.28e-14,33;CL:0000047,8.28e-14,33;CL:0000031,8.28e-14,33;CL:0000404,8.28e-14,33;CL:0000393,1.72e-10,39;CL:0000211,1.72e-10,39;CL:0000221,4.64e-10,44;CL:0000133,4.64e-10,44;CL:0002319,1.41e-09,43;CL:0002609,3.21e-08,6
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!9.16e-33!71;UBERON:0003075!9.16e-33!71;UBERON:0007284!9.16e-33!71;UBERON:0000033!1.66e-32!63;UBERON:0004121!5.47e-29!102;UBERON:0000924!5.47e-29!102;UBERON:0006601!5.47e-29!102;UBERON:0003056!8.26e-28!49;UBERON:0001049!2.10e-27!52;UBERON:0005068!2.10e-27!52;UBERON:0006241!2.10e-27!52;UBERON:0007135!2.10e-27!52;UBERON:0000073!3.99e-27!75;UBERON:0001016!3.99e-27!75;UBERON:0001017!1.21e-26!73;UBERON:0005743!1.21e-26!73;UBERON:0000955!7.00e-26!50;UBERON:0006238!7.00e-26!50;UBERON:0002616!3.87e-25!49;UBERON:0003080!1.41e-20!40;UBERON:0007811!6.30e-20!86;UBERON:0002780!8.88e-20!39;UBERON:0001890!8.88e-20!39;UBERON:0006240!8.88e-20!39;UBERON:0002020!1.19e-19!34;UBERON:0000153!2.26e-16!94;UBERON:0002791!3.53e-16!29;UBERON:0003528!3.53e-16!29;UBERON:0001893!3.53e-16!29;UBERON:0000956!1.13e-10!21;UBERON:0001869!1.13e-10!21;UBERON:0000203!1.13e-10!21;UBERON:0000970!4.55e-08!9;UBERON:0000019!4.55e-08!9;UBERON:0000047!4.55e-08!9;UBERON:0004088!4.55e-08!9;UBERON:0002104!4.55e-08!9;UBERON:0001456!4.55e-08!9;UBERON:0003072!4.55e-08!9;UBERON:0003071!4.55e-08!9;UBERON:0004128!4.55e-08!9;UBERON:0002619!1.08e-07!17;UBERON:0000020!1.39e-07!12;UBERON:0001032!1.39e-07!12;UBERON:0004456!1.39e-07!12;UBERON:0003076!2.69e-07!12;UBERON:0003057!2.69e-07!12;UBERON:0002420!6.69e-07!8;UBERON:0007245!6.69e-07!8;UBERON:0010009!6.69e-07!8;UBERON:0010011!6.69e-07!8;UBERON:0000454!6.69e-07!8
|ontology_enrichment_uberon_v019_2=UBERON:0002346,2.49e-34,64;UBERON:0003075,2.49e-34,64;UBERON:0007284,2.49e-34,64;UBERON:0000073,1.82e-29,54;UBERON:0010371,3.07e-29,73;UBERON:0003056,8.28e-28,49;UBERON:0004121,9.51e-28,95;UBERON:0000924,9.51e-28,95;UBERON:0006601,9.51e-28,95;UBERON:0001049,1.12e-27,52;UBERON:0005068,1.12e-27,52;UBERON:0006241,1.12e-27,52;UBERON:0007135,1.12e-27,52;UBERON:0001017,3.55e-25,73;UBERON:0001016,4.58e-24,75;UBERON:0002020,1.82e-23,34;UBERON:0000955,3.59e-23,47;UBERON:0006238,3.59e-23,47;UBERON:0002616,2.62e-22,46;UBERON:0010314,1.18e-19,92;UBERON:0003080,3.00e-19,40;UBERON:0003528,4.16e-19,29;UBERON:0002791,4.16e-19,29;UBERON:0001893,4.16e-19,29;UBERON:0002780,2.56e-18,39;UBERON:0001890,2.56e-18,39;UBERON:0006240,2.56e-18,39;UBERON:0000956,3.14e-12,21;UBERON:0001869,3.14e-12,21;UBERON:0000203,3.14e-12,21;UBERON:0000970,8.85e-10,9;UBERON:0000019,8.85e-10,9;UBERON:0000047,8.85e-10,9;UBERON:0010312,8.85e-10,9;UBERON:0004088,8.85e-10,9;UBERON:0002104,8.85e-10,9;UBERON:0001456,8.85e-10,9;UBERON:0003072,8.85e-10,9;UBERON:0004128,8.85e-10,9;UBERON:0003071,8.85e-10,9;UBERON:0003076,5.60e-09,12;UBERON:0003057,5.60e-09,12;UBERON:0002619,1.50e-08,17;UBERON:0002420,2.61e-08,8;UBERON:0007245,2.61e-08,8;UBERON:0010009,2.61e-08,8;UBERON:0010011,2.61e-08,8;UBERON:0000454,2.61e-08,8;UBERON:0000020,4.56e-08,12;UBERON:0001032,4.56e-08,12;UBERON:0004456,4.56e-08,12;UBERON:0001444,1.55e-07,11;UBERON:0000033,3.12e-07,13;UBERON:0005085,3.12e-07,13
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0,0,0,0,0,0,0,0,0,0,34.191481885272,38.0873505075864,20.2826049121977,0,0,0,0,0,0,0.384218305321555,17.7309237047497,22.8160035780557,17.0363218694619,2.85650984403804,2.42955395046775,15.3113499018693,19.5524760877202,20.2228133054205,3.30347642998166,6.63974158042976,4.91540906419979,8.17694983927202,7.04454855738554,4.16730696445408,8.09630697104005,2.25105044012672,1.98637722109853,7.36571463684169,2.56269025438385,25.7231235238915,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0.913396434936424,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,3.22058876712702,2.93225389538837,0,0,0,0,7.48953197024113,7.77751024791665,11.1832373380449,2.60736480288415,2.55715457330331,6.02585329222724,4.05603157669394,0,0,0,1.47309299120532,3.513251959993,13.3343220571414,16.9258402017028,10.8507468841715,14.4917743192328,12.4270308676304,19.3962569838639,3.88055056108524,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,5.45394445610208,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,5.62616095642575,0,0,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0,4.17717711348349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.517434735131018,0.214337035031592,0.532020700926821,1.24858172321449,1.64549020602121,2.13125464380219,0.23467170806371,0,0,0,0,0,0,0,0,7.04616147639937,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0.316335993581135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810900861160657,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,3.22227665555024,1.14579102687879,1.03111909406213,2.05524755931193,0.755393897389701,1.35004500046361,4.5032120322422,1.81256963593682,2.07104124700728,24.2862393346973,34.3161391124887,12.9757540373142,2.18796045361465,5.24032906569956,0.735374033800057,2.66696073361938,2.47242068686673,2.88827288632634,1.26348605881899,3.29523089857312,1.50901073108861,1.77918864192777,1.34452820050225,1.55075766180156,1.42888107384922,0.811190281613988,1.92909220463705,1.23625770240992,2.06078488188156,1.37147700954166,0.887379030796687,1.66905332963125,1.45346416632329,1.97629698872194,2.45382362885862,1.28049581010941,1.05227884575137,1.35804113845862,1.68342681497322,1.42362021749009,1.37906275325789,0.818462086339379,1.08455788830176,0.771626443924566,4.24677982494508,1.16965804222704,0.644613162144895,0.191288332068843,0.220591419119515,0.231867835620421
|phase1_expression=0.960893082628764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19060606211498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09012578190223,0,0,0,0,0,0,0,0,0,0,34.191481885272,38.0873505075864,20.2826049121977,0,0,0,0,0,0,0.384218305321555,17.7309237047497,22.8160035780557,17.0363218694619,2.85650984403804,2.42955395046775,15.3113499018693,19.5524760877202,20.2228133054205,3.30347642998166,6.63974158042976,4.91540906419979,8.17694983927202,7.04454855738554,4.16730696445408,8.09630697104005,2.25105044012672,1.98637722109853,7.36571463684169,2.56269025438385,25.7231235238915,0.227178579999552,0.302286240427142,0,0,0,0,0,0,0,0,0,0,1.69012103732017,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.520455980298408,0.913396434936424,0.230615497256059,0,0.117588707135705,0,0,0,0,0,0,0,0,3.22058876712702,2.93225389538837,0,0,0,0,7.48953197024113,7.77751024791665,11.1832373380449,2.60736480288415,2.55715457330331,6.02585329222724,4.05603157669394,0,0,0,1.47309299120532,3.513251959993,13.3343220571414,16.9258402017028,10.8507468841715,14.4917743192328,12.4270308676304,19.3962569838639,3.88055056108524,0,0,0,0,0,0,0,0,0,0,0,0.207125772535502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.15434922846191,5.45394445610208,0,0,0,0,0.257734922644187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0.0701358198903186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37898282354097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.06422595946285,5.62616095642575,0,0,0,0,0.215423397732799,0,0,0,0,0.584511715822624,0,4.17717711348349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.340439605753788,0.720244376125241,0.517434735131018,0.214337035031592,0.532020700926821,1.24858172321449,1.64549020602121,2.13125464380219,0.23467170806371,0,0,0,0,0,0,0,0,7.04616147639937,0,0,0,0,0,0,0,0.139951452323658,0.138199973804424,0,0.316335993581135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.810900861160657,0,0,0,0,0,0,0,0,0.100826185136841,0.0974578807397524,0,0,0,0,0,0,0,0,0,0,0,2.25900737046827,3.22227665555024,1.14579102687879,1.03111909406213,2.05524755931193,0.755393897389701,1.35004500046361,4.5032120322422,1.81256963593682,2.07104124700728,24.2862393346973,34.3161391124887,12.9757540373142,2.18796045361465,5.24032906569956,0.735374033800057,2.66696073361938,2.47242068686673,2.88827288632634,1.26348605881899,3.29523089857312,1.50901073108861,1.77918864192777,1.34452820050225,1.55075766180156,1.42888107384922,0.811190281613988,1.92909220463705,1.23625770240992,2.06078488188156,1.37147700954166,0.887379030796687,1.66905332963125,1.45346416632329,1.97629698872194,2.45382362885862,1.28049581010941,1.05227884575137,1.35804113845862,1.68342681497322,1.42362021749009,1.37906275325789,0.818462086339379,1.08455788830176,0.771626443924566,4.24677982494508,1.16965804222704,0.644613162144895,0.191288332068843,0.220591419119515,0.231867835620421
|short_description=p1@Scrt2
|short_description=p1@Scrt2
}}
}}

Latest revision as of 21:52, 25 September 2015

Short description:p1@Scrt2
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Scrt2_5end
Coexpression cluster:MCL_coexpression_mm9:22
Association with transcript: 281bp_to_ENSMUST00000064061, NM_001160410, uc012cgb.1_5end
EntrezGene:Scrt2
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Scrt2

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.96
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A31.19
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C334.19
Mouse Granule cells, donor2.CNhs12357.11731-123E338.09
Mouse Granule cells, donor3.CNhs12108.11636-122C720.28
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D517.73
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F522.82
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D917.04
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.86
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D52.43
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D215.31
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F219.55
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D620.22
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D33.30
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F36.64
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D74.92
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.18
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.04
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D84.17
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E48.10
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E52.25
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.99
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F62.56
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E125.72
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.30
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G61.69
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.11
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.15
adrenal gland, embryo E14.CNhs11038.406-44C50.52
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.00
adrenal gland, neonate N00.CNhs11191.1311-23C10.12
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.00
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B23.22
cerebellum, neonate N30.CNhs11135.1395-42I22.93
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A47.49
corpus striatum, adult.CNhs10487.19-21D87.78
corpus striatum, neonate N00.CNhs11226.630-43F111.18
cortex, adult.CNhs10473.12-14D52.61
cortex, neonate N30.CNhs11107.1392-42F22.56
diencephalon, adult.CNhs10482.20-12F26.03
diencephalon, neonate N30.CNhs11201.1388-42B24.06
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.00
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G41.47
eyeball, embryo E12.CNhs11016.345-16C63.51
eyeball, embryo E14.CNhs10521.399-16E213.33
eyeball, embryo E15.CNhs10593.426-16C916.93
eyeball, embryo E17.CNhs11023.1261-18D410.85
eyeball, neonate N00.CNhs11207.633-15C614.49
eyeball, neonate N01.CNhs11140.1532-43E712.43
eyeball, neonate N02.CNhs11205.1551-44G819.40
eyeball, neonate N16.CNhs11188.777-19A23.88
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.00
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.00
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.00
gonad, embryo E13.CNhs11044.1564-45I60.00
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E83.15
hippocampus, neonate N00.CNhs11228.627-43G15.45
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.00
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.00
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.20
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.07
kidney, neonate N10.CNhs11206.758-6D50.00
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.38
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.00
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.00
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C27.06
medulla oblongata, neonate N30.CNhs11200.1396-42A35.63
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.58
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I94.18
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.00
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.00
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.00
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.53
pituitary gland, embryo E16.CNhs11036.449-43F61.25
pituitary gland, embryo E17.CNhs11039.1265-44F51.65
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.00
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C97.05
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.32
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.00
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.00
stomach, neonate N03.CNhs11193.1340-24B80.00
stomach, neonate N07.CNhs11210.718-18A90.00
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.00
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.00
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.00
testis, neonate N07.CNhs11222.726-26I40.00
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.81
thymus, embryo E15.CNhs11005.430-45I20.00
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.10
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.26
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A23.22
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A31.15
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A42.06
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A61.35
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A74.50
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A92.07
whole body, embryo E11.CNhs11014.324-5I824.29
whole body, embryo E12.CNhs10587.857-27C934.32
whole body, embryo E13.CNhs10512.372-23H212.98
whole body, embryo E14.5.CNhs10578.420-27D22.19
whole body, embryo E14.CNhs10519.395-14B15.24
whole body, embryo E16.CNhs10514.453-14F20.74
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G52.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G52.47
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G52.89
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G51.26
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.51
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.78
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.34
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G51.55
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G51.43
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G51.93
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.06
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G51.37
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G51.67
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.98
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G52.45
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.05
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G51.42
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G51.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.08
whole body, embryo E17.5.CNhs10513.490-9F90.77
whole body, embryo E17.CNhs10517.475-3I54.25
whole body, embryo E18.CNhs10516.493-3B31.17
whole body, neonate N00.CNhs10525.657-19C20.64
whole body, neonate N01.CNhs10576.659-23C60.19
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
neurectoderm2.49e-3464
neural plate2.49e-3464
presumptive neural plate2.49e-3464
regional part of nervous system1.82e-2954
ecto-epithelium3.07e-2973
pre-chordal neural plate8.28e-2849
ectoderm-derived structure9.51e-2895
ectoderm9.51e-2895
presumptive ectoderm9.51e-2895
neural tube1.12e-2752
neural rod1.12e-2752
future spinal cord1.12e-2752
neural keel1.12e-2752
central nervous system3.55e-2573
nervous system4.58e-2475
gray matter1.82e-2334
brain3.59e-2347
future brain3.59e-2347
regional part of brain2.62e-2246
structure with developmental contribution from neural crest1.18e-1992
anterior neural tube3.00e-1940
brain grey matter4.16e-1929
regional part of telencephalon4.16e-1929
telencephalon4.16e-1929
regional part of forebrain2.56e-1839
forebrain2.56e-1839
future forebrain2.56e-1839
cerebral cortex3.14e-1221
cerebral hemisphere3.14e-1221
pallium3.14e-1221
eye8.85e-109
camera-type eye8.85e-109
simple eye8.85e-109
immature eye8.85e-109
ocular region8.85e-109
visual system8.85e-109
face8.85e-109
optic cup8.85e-109
optic vesicle8.85e-109
eye primordium8.85e-109
posterior neural tube5.60e-0912
chordal neural plate5.60e-0912
regional part of cerebral cortex1.50e-0817
basal ganglion2.61e-088
nuclear complex of neuraxis2.61e-088
aggregate regional part of brain2.61e-088
collection of basal ganglia2.61e-088
cerebral subcortex2.61e-088
sense organ4.56e-0812
sensory system4.56e-0812
entire sense organ system4.56e-0812
subdivision of head1.55e-0711
head3.12e-0713
ectodermal placode3.12e-0713
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