FFCP PHASE1:Mm9::chr19:47538896..47538940,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14218 | |EntrezGene=14218 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=107 | |||
|TSSclassifier=NA | |||
|UniProt=O89032,E9QQ42,E9QQ41 | |UniProt=O89032,E9QQ42,E9QQ41 | ||
|association_with_transcript=0bp_to_ENSMUST00000081619,ENSMUST00000111796,ENSMUST00000111800,NM_001164717,NM_008018,uc008huz.2,uc008hva.2_5end | |association_with_transcript=0bp_to_ENSMUST00000081619,ENSMUST00000111796,ENSMUST00000111800,NM_001164717,NM_008018,uc008huz.2,uc008hva.2_5end | ||
|cluster_id=chr19:47538896..47538940,- | |||
|description=CAGE_peak_3_at_Sh3pxd2a_5end | |description=CAGE_peak_3_at_Sh3pxd2a_5end | ||
|id=chr19:47538896..47538940,- | |id=chr19:47538896..47538940,- | ||
|ontology_enrichment_celltype=CL:0000107!1.47e-07!9 | |ontology_enrichment_celltype=CL:0000107!1.47e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000107,1.42e-07,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!8.33e-09!11;UBERON:0001048!1.40e-07!147;UBERON:0002410!1.47e-07!9;UBERON:0000468!6.04e-07!333;UBERON:0002048!7.30e-07!14;UBERON:0000117!7.30e-07!14;UBERON:0000171!7.30e-07!14;UBERON:0000170!7.30e-07!14;UBERON:0005597!7.30e-07!14;UBERON:0000118!7.30e-07!14 | |ontology_enrichment_uberon=UBERON:0000010!8.33e-09!11;UBERON:0001048!1.40e-07!147;UBERON:0002410!1.47e-07!9;UBERON:0000468!6.04e-07!333;UBERON:0002048!7.30e-07!14;UBERON:0000117!7.30e-07!14;UBERON:0000171!7.30e-07!14;UBERON:0000170!7.30e-07!14;UBERON:0005597!7.30e-07!14;UBERON:0000118!7.30e-07!14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,8.02e-09,11;UBERON:0002410,1.42e-07,9;UBERON:0002048,7.10e-07,14;UBERON:0000117,7.10e-07,14;UBERON:0000171,7.10e-07,14;UBERON:0000170,7.10e-07,14;UBERON:0005597,7.10e-07,14;UBERON:0000118,7.10e-07,14 | |||
|phase1_expression=12.0111635328595,3.14077866875425,4.54999239389536,0.60492842261366,0,8.89760141133016,8.41005506143892,3.22808308603941,5.20918271961167,5.61754863172784,0.856089841127525,0.239316476986009,8.9024379564227,2.71003247498892,2.6648780945253,2.63217847606774,2.09868563438444,9.77932712610537,10.4206969540361,7.63901373236454,6.88850650223665,2.38298282882125,2.08959831311148,2.71987118748791,2.06468352960453,8.03924749761028,8.18447792702242,10.7735616342945,1.33016393619462,2.52030129759931,1.77384408524244,0,0,0,0.288851619751275,0.831173226792462,1.42918549383658,0,0,0,0,0.683045484958446,0.485510353031154,1.51076181570693,1.01376931219515,1.10128051297009,0.782391344348039,2.18025156380447,4.61340983742391,1.74986909166855,4.05960622713551,1.43752564364972,10.4025215755797,7.97898356212479,5.71359458542189,1.54355661621568,0.85960031981627,0.515672092277442,1.82084814773638,1.5869729378161,1.90149421051854,1.35537812827653,0.889294796111139,0,0.988866362566974,0,11.3848041996994,4.61061966385865,8.8136170462206,5.53524347159932,6.52007380189284,3.71346279724945,5.74258206474195,11.3916443269907,11.5973019932066,4.5960939330501,0,0.638436690425939,1.22885226604995,2.37395317914349,1.73826522844578,3.12548022334056,0.837548997004143,0.56276261003168,0.916789486660861,5.59794312399969,4.8406371471695,2.79599168737951,31.5020964266046,49.8772296704784,10.1452571045587,9.46466264679525,23.7989966797713,18.8896117073236,20.1430689408777,8.96053774194671,5.89866564553358,1.36344258062446,0.519572009205738,0.70667914902068,24.225068201589,1.28326477414318,2.54805239706646,0,1.08245520505607,1.52015919285059,1.51657333504435,7.30776830201984,10.616453229534,1.48442139064825,10.5826049327343,7.61163695780353,6.6878494204257,5.72746034099966,7.64326596382081,2.26199864393416,9.14621380617183,2.89198713839823,3.5384422077995,27.5003644910596,9.05450225687614,9.69750506270444,1.86391761218122,1.46390398505774,2.93225389538837,3.83185582812887,1.1981512450592,2.39961092397363,1.65191295194984,1.04853447583376,0.915001205637253,2.26177833803156,0.869121600961382,1.27857728665165,0.83115217823824,2.10913641988085,9.26738211037878,5.84712761867437,1.26361379216837,2.94618598241064,7.026503919986,9.42598628177239,11.343914177737,15.0704817835715,12.246569847239,16.6547836370305,15.554486276915,6.20888089773638,4.52692785158969,10.4008344092301,11.6127741948206,15.3437012699302,21.409638190371,23.6811473235073,21.1955600500182,11.7430217422911,0.702213187313235,1.54408744268829,0.852490498186778,16.1558102577691,18.9966108584688,21.7875094367828,26.5154103855435,25.1858216636677,25.6083407393048,22.3232586960392,25.7542465343634,15.2962598500992,22.8738191379738,18.0584210487005,17.8351381000883,16.0819986167866,16.9053588774109,14.3600868073598,1.05144974282064,1.13195073617213,1.32167513193519,2.11560453330835,13.0105832826493,12.7730169523241,10.5671318284117,10.2858597557905,9.33987784148455,5.1360919050391,5.69434873853414,5.76446341534038,7.79139147280835,6.16765063327568,8.57841983324129,3.59527763461689,2.16138049874694,4.58024928485045,6.2590407314517,10.967857210534,10.1436962105772,8.5533557695032,12.9948166402309,10.9411879028897,7.90456714053216,7.38050739898011,5.33795674660674,6.66344685177723,4.44678940630723,8.3422552858047,6.6830058338489,4.72210436008193,5.27436315610108,6.75296047306767,4.58326533206556,9.78166867332756,10.2145192868272,12.0807021802756,15.814502718009,8.18710084870708,18.7222603868736,17.9331003342449,17.4015491116255,12.5435315554475,22.5398892003258,12.506433176852,15.6446377384345,12.7308814331391,11.9692026627136,15.5780819420889,18.091316707337,30.4408490658166,30.4235828124949,29.6762684129358,41.1393303136317,44.0792316585335,31.7740366633248,31.9674419465141,0,0,3.44234991113325,3.31124095565679,1.28440471990234,1.87538698547525,5.24591825205361,11.8661335786055,60.5775781279213,54.6614242015294,66.9966766949005,90.8081432219698,76.1971465361788,66.8060612661644,52.6253912177363,55.8208688610606,52.5732744668876,0.963963949265421,3.26462195979018,12.4645922567079,14.1711654637611,6.92874516484649,17.2568679841952,10.9251286269742,15.1161778482376,15.4656165399836,18.0134154657271,21.213025208131,22.224833212467,23.2661586865604,21.3898427030833,15.8018378967908,10.5418608574999,15.470331487228,2.04263763452273,9.00305470156551,11.5129228566652,13.5032332069903,13.3005175231705,15.3397183137781,14.3157647923845,9.43841342255258,11.2642419870581,24.9961843619308,1.7642271844397,10.8824926941377,17.4381580831578,16.8273060549555,10.9822556482886,9.68431308495861,7.86998258900597,2.03967832211561,5.46786818553129,10.1129565301979,3.70389054739423,2.82552685507037,5.87785179200408,7.0921233694022,0.849892149969277,1.25956307091292,0.690999869022119,2.86401185404534,12.0207677560831,11.9958485604841,7.66837919834789,9.82714991268003,6.33251434863915,9.03591120778299,9.09188012978695,6.80565449158477,3.24037433229482,2.4853572523477,0,12.7089064137382,8.43838301331198,8.16694991045,9.04118764344118,8.27885014904813,7.3935060346825,6.38001485735356,4.71867049915699,1.20792060413003,2.59227005632079,6.32022241256356,11.9607877021197,16.7418860178668,11.8227948909793,12.3528420010562,10.530111803407,8.89446326447769,9.15675068482379,8.78408114548884,8.91619637863498,8.06609481094724,10.4279932391535,8.56285390598932,8.2982600548914,9.29594572822367,0.443971906748129,0.358855426437903,1.34307693091263,3.47741269257943,3.94133198447482,2.93042598827624,6.00231461421384,0,0.564751842617067,2.30162618253588,1.14579102687879,0.68741272937475,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0.51776031175182,6.74617759297148,13.5668456956351,12.4635532200518,17.5036836289172,7.96530017986333,9.19217542250071,14.446037307105,17.512979865306,18.6133141563253,21.226565788159,22.5596576902313,17.1649970661329,20.2265656134946,21.3844009032263,19.2983175690861,24.2909782554368,17.8461861955077,22.9561972351809,20.192209139362,19.8718542181436,18.172070376427,22.1844757699172,20.2670761455223,18.7496877455704,19.5747511263888,18.5305991282772,23.0489245819693,17.3626009548976,18.7409677107289,19.6399795080208,24.2015436973315,20.7844457812439,16.3692417267876,15.9584946421545,16.0112487114347,19.7350356570977,20.8199131516413,16.7599422157673,26.7803664896381,14.117850823649,13.4483344659844 | |phase1_expression=12.0111635328595,3.14077866875425,4.54999239389536,0.60492842261366,0,8.89760141133016,8.41005506143892,3.22808308603941,5.20918271961167,5.61754863172784,0.856089841127525,0.239316476986009,8.9024379564227,2.71003247498892,2.6648780945253,2.63217847606774,2.09868563438444,9.77932712610537,10.4206969540361,7.63901373236454,6.88850650223665,2.38298282882125,2.08959831311148,2.71987118748791,2.06468352960453,8.03924749761028,8.18447792702242,10.7735616342945,1.33016393619462,2.52030129759931,1.77384408524244,0,0,0,0.288851619751275,0.831173226792462,1.42918549383658,0,0,0,0,0.683045484958446,0.485510353031154,1.51076181570693,1.01376931219515,1.10128051297009,0.782391344348039,2.18025156380447,4.61340983742391,1.74986909166855,4.05960622713551,1.43752564364972,10.4025215755797,7.97898356212479,5.71359458542189,1.54355661621568,0.85960031981627,0.515672092277442,1.82084814773638,1.5869729378161,1.90149421051854,1.35537812827653,0.889294796111139,0,0.988866362566974,0,11.3848041996994,4.61061966385865,8.8136170462206,5.53524347159932,6.52007380189284,3.71346279724945,5.74258206474195,11.3916443269907,11.5973019932066,4.5960939330501,0,0.638436690425939,1.22885226604995,2.37395317914349,1.73826522844578,3.12548022334056,0.837548997004143,0.56276261003168,0.916789486660861,5.59794312399969,4.8406371471695,2.79599168737951,31.5020964266046,49.8772296704784,10.1452571045587,9.46466264679525,23.7989966797713,18.8896117073236,20.1430689408777,8.96053774194671,5.89866564553358,1.36344258062446,0.519572009205738,0.70667914902068,24.225068201589,1.28326477414318,2.54805239706646,0,1.08245520505607,1.52015919285059,1.51657333504435,7.30776830201984,10.616453229534,1.48442139064825,10.5826049327343,7.61163695780353,6.6878494204257,5.72746034099966,7.64326596382081,2.26199864393416,9.14621380617183,2.89198713839823,3.5384422077995,27.5003644910596,9.05450225687614,9.69750506270444,1.86391761218122,1.46390398505774,2.93225389538837,3.83185582812887,1.1981512450592,2.39961092397363,1.65191295194984,1.04853447583376,0.915001205637253,2.26177833803156,0.869121600961382,1.27857728665165,0.83115217823824,2.10913641988085,9.26738211037878,5.84712761867437,1.26361379216837,2.94618598241064,7.026503919986,9.42598628177239,11.343914177737,15.0704817835715,12.246569847239,16.6547836370305,15.554486276915,6.20888089773638,4.52692785158969,10.4008344092301,11.6127741948206,15.3437012699302,21.409638190371,23.6811473235073,21.1955600500182,11.7430217422911,0.702213187313235,1.54408744268829,0.852490498186778,16.1558102577691,18.9966108584688,21.7875094367828,26.5154103855435,25.1858216636677,25.6083407393048,22.3232586960392,25.7542465343634,15.2962598500992,22.8738191379738,18.0584210487005,17.8351381000883,16.0819986167866,16.9053588774109,14.3600868073598,1.05144974282064,1.13195073617213,1.32167513193519,2.11560453330835,13.0105832826493,12.7730169523241,10.5671318284117,10.2858597557905,9.33987784148455,5.1360919050391,5.69434873853414,5.76446341534038,7.79139147280835,6.16765063327568,8.57841983324129,3.59527763461689,2.16138049874694,4.58024928485045,6.2590407314517,10.967857210534,10.1436962105772,8.5533557695032,12.9948166402309,10.9411879028897,7.90456714053216,7.38050739898011,5.33795674660674,6.66344685177723,4.44678940630723,8.3422552858047,6.6830058338489,4.72210436008193,5.27436315610108,6.75296047306767,4.58326533206556,9.78166867332756,10.2145192868272,12.0807021802756,15.814502718009,8.18710084870708,18.7222603868736,17.9331003342449,17.4015491116255,12.5435315554475,22.5398892003258,12.506433176852,15.6446377384345,12.7308814331391,11.9692026627136,15.5780819420889,18.091316707337,30.4408490658166,30.4235828124949,29.6762684129358,41.1393303136317,44.0792316585335,31.7740366633248,31.9674419465141,0,0,3.44234991113325,3.31124095565679,1.28440471990234,1.87538698547525,5.24591825205361,11.8661335786055,60.5775781279213,54.6614242015294,66.9966766949005,90.8081432219698,76.1971465361788,66.8060612661644,52.6253912177363,55.8208688610606,52.5732744668876,0.963963949265421,3.26462195979018,12.4645922567079,14.1711654637611,6.92874516484649,17.2568679841952,10.9251286269742,15.1161778482376,15.4656165399836,18.0134154657271,21.213025208131,22.224833212467,23.2661586865604,21.3898427030833,15.8018378967908,10.5418608574999,15.470331487228,2.04263763452273,9.00305470156551,11.5129228566652,13.5032332069903,13.3005175231705,15.3397183137781,14.3157647923845,9.43841342255258,11.2642419870581,24.9961843619308,1.7642271844397,10.8824926941377,17.4381580831578,16.8273060549555,10.9822556482886,9.68431308495861,7.86998258900597,2.03967832211561,5.46786818553129,10.1129565301979,3.70389054739423,2.82552685507037,5.87785179200408,7.0921233694022,0.849892149969277,1.25956307091292,0.690999869022119,2.86401185404534,12.0207677560831,11.9958485604841,7.66837919834789,9.82714991268003,6.33251434863915,9.03591120778299,9.09188012978695,6.80565449158477,3.24037433229482,2.4853572523477,0,12.7089064137382,8.43838301331198,8.16694991045,9.04118764344118,8.27885014904813,7.3935060346825,6.38001485735356,4.71867049915699,1.20792060413003,2.59227005632079,6.32022241256356,11.9607877021197,16.7418860178668,11.8227948909793,12.3528420010562,10.530111803407,8.89446326447769,9.15675068482379,8.78408114548884,8.91619637863498,8.06609481094724,10.4279932391535,8.56285390598932,8.2982600548914,9.29594572822367,0.443971906748129,0.358855426437903,1.34307693091263,3.47741269257943,3.94133198447482,2.93042598827624,6.00231461421384,0,0.564751842617067,2.30162618253588,1.14579102687879,0.68741272937475,0.685082519770642,0,0,0.45032120322422,0.453142408984205,0.51776031175182,6.74617759297148,13.5668456956351,12.4635532200518,17.5036836289172,7.96530017986333,9.19217542250071,14.446037307105,17.512979865306,18.6133141563253,21.226565788159,22.5596576902313,17.1649970661329,20.2265656134946,21.3844009032263,19.2983175690861,24.2909782554368,17.8461861955077,22.9561972351809,20.192209139362,19.8718542181436,18.172070376427,22.1844757699172,20.2670761455223,18.7496877455704,19.5747511263888,18.5305991282772,23.0489245819693,17.3626009548976,18.7409677107289,19.6399795080208,24.2015436973315,20.7844457812439,16.3692417267876,15.9584946421545,16.0112487114347,19.7350356570977,20.8199131516413,16.7599422157673,26.7803664896381,14.117850823649,13.4483344659844 | ||
|short_description=p3@Sh3pxd2a | |short_description=p3@Sh3pxd2a | ||
}} | }} |
Latest revision as of 21:57, 25 September 2015
Short description: | p3@Sh3pxd2a |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Sh3pxd2a_5end |
Coexpression cluster: | MCL_coexpression_mm9:107 |
Association with transcript: | 0bp_to_ENSMUST00000081619, ENSMUST00000111796, ENSMUST00000111800, NM_001164717, NM_008018, uc008huz.2, uc008hva.2_5end |
EntrezGene: | Sh3pxd2a |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 1.42e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 8.02e-09 | 11 |
autonomic nervous system | 1.42e-07 | 9 |
lung | 7.10e-07 | 14 |
respiratory tube | 7.10e-07 | 14 |
respiration organ | 7.10e-07 | 14 |
pair of lungs | 7.10e-07 | 14 |
lung primordium | 7.10e-07 | 14 |
lung bud | 7.10e-07 | 14 |