FFCP PHASE1:Mm9::chr2:152430137..152430146,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=266620 | |EntrezGene=266620 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=70 | |||
|TSSclassifier=NA | |||
|UniProt=Q8K3U4,D3Z4L0 | |UniProt=Q8K3U4,D3Z4L0 | ||
|association_with_transcript=74bp_to_ENSMUST00000058086,NM_001037247,uc008nfu.2_5end | |association_with_transcript=74bp_to_ENSMUST00000058086,NM_001037247,uc008nfu.2_5end | ||
|cluster_id=chr2:152430137..152430146,+ | |||
|description=CAGE_peak_4_at_Defb36_5end | |description=CAGE_peak_4_at_Defb36_5end | ||
|id=chr2:152430137..152430146,+ | |id=chr2:152430137..152430146,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000473!1.96e-45!14;UBERON:0003135!2.75e-42!15;UBERON:0003101!1.56e-39!16;UBERON:0000079!1.56e-39!16;UBERON:0004176!4.22e-37!17;UBERON:0009196!4.22e-37!17;UBERON:0009117!4.22e-37!17;UBERON:0000991!6.13e-35!18;UBERON:0005564!6.13e-35!18;UBERON:0003133!9.62e-26!24;UBERON:0005156!1.28e-23!26;UBERON:0000990!1.28e-23!26;UBERON:0002323!5.00e-16!37;UBERON:0004458!5.00e-16!37;UBERON:0003886!1.48e-15!38;UBERON:0002553!4.17e-15!39;UBERON:0000464!1.03e-09!57;UBERON:0001343!1.58e-09!2;UBERON:0004910!1.58e-09!2;UBERON:0004909!1.58e-09!2;UBERON:0005154!1.58e-09!2;UBERON:0005295!1.58e-09!2;UBERON:0005297!1.58e-09!2;UBERON:0005294!1.58e-09!2;UBERON:0010141!1.58e-09!2;UBERON:0005891!1.58e-09!2;UBERON:0003064!1.92e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000473,2.17e-26,14;UBERON:0003135,1.13e-24,15;UBERON:0003101,3.60e-23,16;UBERON:0000079,3.60e-23,16;UBERON:0004176,7.65e-22,17;UBERON:0009196,7.65e-22,17;UBERON:0009117,7.65e-22,17;UBERON:0000991,1.16e-20,18;UBERON:0005564,1.16e-20,18;UBERON:0003133,1.23e-15,24;UBERON:0005156,1.80e-14,26;UBERON:0000990,1.80e-14,26;UBERON:0002323,2.64e-10,37;UBERON:0004458,2.64e-10,37;UBERON:0003886,4.80e-10,38;UBERON:0002553,8.49e-10,39 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.32800820289447,0,0.330916980914195,0.388902376688095,0.516639293910924,0.844780627453891,0.469428954583016,2.73429208172295,10.3810750981454,4.59009829569411,1.15212002503146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.87095238332354,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,0,0,0.173485326766136,0,0,0,0.117588707135705,0.125666591329675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305518091550949,0.124406970610093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.32800820289447,0,0.330916980914195,0.388902376688095,0.516639293910924,0.844780627453891,0.469428954583016,2.73429208172295,10.3810750981454,4.59009829569411,1.15212002503146,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p4@Defb36 | |short_description=p4@Defb36 | ||
}} | }} |
Latest revision as of 22:11, 25 September 2015
Short description: | p4@Defb36 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Defb36_5end |
Coexpression cluster: | MCL_coexpression_mm9:70 |
Association with transcript: | 74bp_to_ENSMUST00000058086, NM_001037247, uc008nfu.2_5end |
EntrezGene: | Defb36 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
testis | 2.17e-26 | 14 |
male reproductive organ | 1.13e-24 | 15 |
male organism | 3.60e-23 | 16 |
male reproductive system | 3.60e-23 | 16 |
external genitalia | 7.65e-22 | 17 |
indifferent external genitalia | 7.65e-22 | 17 |
indifferent gonad | 7.65e-22 | 17 |
gonad | 1.16e-20 | 18 |
gonad primordium | 1.16e-20 | 18 |
reproductive organ | 1.23e-15 | 24 |
reproductive structure | 1.80e-14 | 26 |
reproductive system | 1.80e-14 | 26 |
body cavity | 2.64e-10 | 37 |
body cavity or lining | 2.64e-10 | 37 |
body cavity precursor | 4.80e-10 | 38 |
anatomical cavity | 8.49e-10 | 39 |