FFCP PHASE1:Mm9::chr14:52935788..52935817,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=50524 | |EntrezGene=50524 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q3Q0,Q8BP69 | |UniProt=E9Q3Q0,Q8BP69 | ||
|association_with_transcript=92bp_to_ENSMUST00000163383,uc007tpe.1_5end | |association_with_transcript=92bp_to_ENSMUST00000163383,uc007tpe.1_5end | ||
|cluster_id=chr14:52935788..52935817,- | |||
|description=CAGE_peak_2_at_Sall2_5end | |description=CAGE_peak_2_at_Sall2_5end | ||
|id=chr14:52935788..52935817,- | |id=chr14:52935788..52935817,- | ||
|ontology_enrichment_celltype=CL:0000221!1.21e-17!44;CL:0000133!1.21e-17!44;CL:0002319!1.74e-17!43;CL:0000055!6.86e-17!50;CL:0000540!8.00e-17!33;CL:0000047!8.00e-17!33;CL:0000031!8.00e-17!33;CL:0000404!8.00e-17!33;CL:0000393!2.47e-16!39;CL:0000211!2.47e-16!39;CL:0000117!1.23e-10!23;CL:0000337!1.23e-10!23;CL:0002321!3.01e-08!70;CL:0000220!3.01e-08!70;CL:0000107!1.46e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.15e-19,44;CL:0000133,1.15e-19,44;CL:0002319,1.71e-19,43;CL:0000540,2.03e-18,33;CL:0000047,2.03e-18,33;CL:0000031,2.03e-18,33;CL:0000404,2.03e-18,33;CL:0000393,4.20e-17,39;CL:0000211,4.20e-17,39;CL:0000117,1.39e-11,23;CL:0000337,1.39e-11,23;CL:0002321,3.72e-10,70;CL:0000107,3.44e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.33e-22!75;UBERON:0001016!1.33e-22!75;UBERON:0001017!5.20e-22!73;UBERON:0005743!5.20e-22!73;UBERON:0004121!1.78e-20!102;UBERON:0000924!1.78e-20!102;UBERON:0006601!1.78e-20!102;UBERON:0002346!2.72e-15!71;UBERON:0003075!2.72e-15!71;UBERON:0007284!2.72e-15!71;UBERON:0001049!4.05e-12!52;UBERON:0005068!4.05e-12!52;UBERON:0006241!4.05e-12!52;UBERON:0007135!4.05e-12!52;UBERON:0000033!1.02e-11!63;UBERON:0000955!2.89e-11!50;UBERON:0006238!2.89e-11!50;UBERON:0002616!4.37e-11!49;UBERON:0000025!2.66e-10!114;UBERON:0004111!1.32e-09!122;UBERON:0003056!3.55e-09!49;UBERON:0000468!3.36e-08!333;UBERON:0003080!4.97e-08!40;UBERON:0000010!9.04e-08!11;UBERON:0002780!1.12e-07!39;UBERON:0001890!1.12e-07!39;UBERON:0006240!1.12e-07!39;UBERON:0002410!1.46e-07!9;UBERON:0000922!2.84e-07!328;UBERON:0002020!9.60e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.40e-25,75;UBERON:0001017,3.79e-24,73;UBERON:0004121,6.94e-21,95;UBERON:0000924,6.94e-21,95;UBERON:0006601,6.94e-21,95;UBERON:0002346,2.72e-16,64;UBERON:0003075,2.72e-16,64;UBERON:0007284,2.72e-16,64;UBERON:0010314,1.36e-15,92;UBERON:0000073,3.12e-14,54;UBERON:0010371,1.73e-13,73;UBERON:0001049,5.79e-13,52;UBERON:0005068,5.79e-13,52;UBERON:0006241,5.79e-13,52;UBERON:0007135,5.79e-13,52;UBERON:0000955,2.67e-10,47;UBERON:0006238,2.67e-10,47;UBERON:0002616,4.16e-10,46;UBERON:0003056,1.04e-09,49;UBERON:0000025,3.49e-09,114;UBERON:0003080,1.76e-08,40;UBERON:0000010,2.02e-08,11;UBERON:0004111,2.32e-08,122;UBERON:0002410,3.44e-08,9;UBERON:0002780,4.31e-08,39;UBERON:0001890,4.31e-08,39;UBERON:0006240,4.31e-08,39;UBERON:0002020,4.54e-07,34 | |||
|phase1_expression=2.08193501236232,0,0,0,0,0.16787927191189,0.233612640595526,0.258246646883153,0.140788722151667,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,1.10556277196391,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,1.4192770370732,0.917733760808408,1.56478268869608,2.39827672018491,2.41654801007919,2.3331587888914,2.2397827460058,0,0,0,0,6.68874533693462,1.43266719969378,3.6097046459421,3.64169629547276,5.28990979272033,5.07065122804943,0.338844532069132,3.55717918444456,0.449949858640699,0,0.7104801149461,3.59520132622086,4.61061966385865,1.97010263386108,2.02508907497536,1.89292465216244,3.42781181284564,3.3130281142742,3.30725157880376,3.1629005436018,5.51531271966013,7.70811166995721,5.74593021383345,4.76180253094355,5.27545150920775,4.7573574673253,4.16730696445408,5.30447698102624,2.25105044012672,3.51435969886663,5.30331453852602,4.12877874317399,4.47358669980721,1.66597625333005,4.60986516651392,2.89864488701678,0.860423876981386,0,0.539703191637817,0.649776417447669,0.448026887097336,0.140444420131752,0.852151612890289,0.519572009205738,1.41335829804136,2.25349471642689,2.56652954828636,2.54805239706646,0,1.73192832808971,1.01343946190039,0.505524445014783,0.5709193985953,1.03575153458869,1.7813056687779,2.25530924795977,0.913396434936424,2.07553947530453,1.50722640552623,1.41106448562846,1.63366568728578,0.494389935468748,0,0,1.29413479957927,0.441683036920787,0,0,2.92780797011547,4.81727425670947,0,0.479260498023681,0,0.127070227073065,3.59497534571574,4.11750542536764,1.38219787324151,1.39059456153821,1.02286182932132,3.74018480207208,2.59586020908412,1.83310854930569,1.36847667671102,2.0217820674694,0.420883711772948,5.07469727554544,2.98872735763515,3.24111833649629,2.10986744970001,2.24520447199382,1.92170580427275,2.06143794031403,1.55222022443409,2.58681591519411,3.21480336285293,2.81521798662318,1.7535658594206,0.834141747676794,1.39300866608867,0.823128545631774,2.58744546864041,0,0,0.284163499395593,5.38527008592305,3.75241695969754,1.62055855314913,3.78791576936336,2.55793501271625,2.00547246753592,1.62773761325285,1.07309360559848,1.16765342367169,0.658239399653922,0.32833492815819,0.648550476366846,0.877199924551994,0.878200461164203,0.939444931322602,1.47202963994889,1.13195073617213,0,0,2.55945900642281,2.55460339046482,1.80414445850931,1.4117846723634,0.667134131534611,0.951128130562796,0.949058123089023,0.823494773620054,0.502670417600539,0.795825888164603,0.974820435595601,0,0,0.199141273254367,6.44870863240478,4.45569199177942,4.50830942692322,2.03651327845314,5.04276466635827,3.57692681440625,1.96033265085198,2.06654207171443,1.41298855057237,1.35736880313981,0.296452627087149,2.33583148002532,0.589676985339609,0.674586337154561,0.811440485554012,0.241177159752417,0.50925170356284,0.287696137450811,0.486405680325106,0.274561413188081,1.43768206527355,1.86070473834252,1.87222603868736,0.757736633841335,0.358794827043824,0,2.21703828199926,2.65287976478679,3.09633455239849,3.56464680127895,1.87752198630802,2.34508760418542,4.76087281772027,2.34160377429359,2.67979744980525,5.53661724121937,3.34855014180723,1.80249646187312,1.03610989119537,2.60368305446721,0,0,0,0.827810238914197,2.40825884981688,3.16471553798949,1.63934945376675,0.757412781613119,7.2566890465739,9.37052986311932,8.83235930704476,13.1432838873904,10.0259403337077,8.77537245445381,7.2865926301481,7.3063964477828,6.7198922250909,2.24924921495265,0.851640511249612,3.38324646967785,2.93196526836437,2.14461159864296,0,2.18502572539483,1.81394134178851,0.377210159511796,0.590603785761546,0.922305443831782,1.29214146584111,1.09060118843252,1.06949213515416,0.316036757935816,0,1.03135543248187,2.7235168460303,4.50152735078276,4.01011919726539,2.57204442037911,1.41872186913819,2.49716344642899,3.62007845324666,4.26250928760439,3.28540391289194,0,0.661585194164886,1.15420377059036,0.807322133479528,0.904693873922338,1.19372344003136,0.984845398470368,0.291480836629851,4.82105785227325,1.02522528478712,5.36605856704379,2.40752885580625,0.941842285023455,0,0.228778173206523,0.509935289981566,0.559805809294632,0.552799895217695,0,6.48488786841327,2.23651413839534,1.51207477150522,1.04544148007234,0.655087691238533,1.21377911746339,0.826534557253359,0.785267825952089,0.388844919875379,0,0,3.73791365109947,3.47462829959905,2.52786544847262,2.19571699912143,1.520605129417,2.8165737274981,1.5624526181274,2.09718688851422,0.241584120826006,0.288030006257865,0.632022241256357,1.82452693761148,0.616265742988964,0.25984164595559,0,0.79472541912506,0.120195449519969,0.443068581523732,0.201932899896295,0.15241361331,0,0.194915761479505,0.0962118416403295,0.233753804363138,0.680191150845634,1.10992976687032,0.897138566094757,1.00730769818447,1.15913756419314,0.563047426353546,1.09890974560359,0.643105137237198,1.50471631210609,0.564751842617067,0.460325236507177,0,0.859265911718438,2.05524755931193,3.7769694869485,1.35004500046361,2.70192721934532,3.62513927187364,3.62432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|phase1_expression=2.08193501236232,0,0,0,0,0.16787927191189,0.233612640595526,0.258246646883153,0.140788722151667,0,0,0,0,0,0.333109761815663,0,0,0,0.137114433605739,0,1.10556277196391,0.0992909512008853,0.261199789138935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.755380907853464,1.4192770370732,0.917733760808408,1.56478268869608,2.39827672018491,2.41654801007919,2.3331587888914,2.2397827460058,0,0,0,0,6.68874533693462,1.43266719969378,3.6097046459421,3.64169629547276,5.28990979272033,5.07065122804943,0.338844532069132,3.55717918444456,0.449949858640699,0,0.7104801149461,3.59520132622086,4.61061966385865,1.97010263386108,2.02508907497536,1.89292465216244,3.42781181284564,3.3130281142742,3.30725157880376,3.1629005436018,5.51531271966013,7.70811166995721,5.74593021383345,4.76180253094355,5.27545150920775,4.7573574673253,4.16730696445408,5.30447698102624,2.25105044012672,3.51435969886663,5.30331453852602,4.12877874317399,4.47358669980721,1.66597625333005,4.60986516651392,2.89864488701678,0.860423876981386,0,0.539703191637817,0.649776417447669,0.448026887097336,0.140444420131752,0.852151612890289,0.519572009205738,1.41335829804136,2.25349471642689,2.56652954828636,2.54805239706646,0,1.73192832808971,1.01343946190039,0.505524445014783,0.5709193985953,1.03575153458869,1.7813056687779,2.25530924795977,0.913396434936424,2.07553947530453,1.50722640552623,1.41106448562846,1.63366568728578,0.494389935468748,0,0,1.29413479957927,0.441683036920787,0,0,2.92780797011547,4.81727425670947,0,0.479260498023681,0,0.127070227073065,3.59497534571574,4.11750542536764,1.38219787324151,1.39059456153821,1.02286182932132,3.74018480207208,2.59586020908412,1.83310854930569,1.36847667671102,2.0217820674694,0.420883711772948,5.07469727554544,2.98872735763515,3.24111833649629,2.10986744970001,2.24520447199382,1.92170580427275,2.06143794031403,1.55222022443409,2.58681591519411,3.21480336285293,2.81521798662318,1.7535658594206,0.834141747676794,1.39300866608867,0.823128545631774,2.58744546864041,0,0,0.284163499395593,5.38527008592305,3.75241695969754,1.62055855314913,3.78791576936336,2.55793501271625,2.00547246753592,1.62773761325285,1.07309360559848,1.16765342367169,0.658239399653922,0.32833492815819,0.648550476366846,0.877199924551994,0.878200461164203,0.939444931322602,1.47202963994889,1.13195073617213,0,0,2.55945900642281,2.55460339046482,1.80414445850931,1.4117846723634,0.667134131534611,0.951128130562796,0.949058123089023,0.823494773620054,0.502670417600539,0.795825888164603,0.974820435595601,0,0,0.199141273254367,6.44870863240478,4.45569199177942,4.50830942692322,2.03651327845314,5.04276466635827,3.57692681440625,1.96033265085198,2.06654207171443,1.41298855057237,1.35736880313981,0.296452627087149,2.33583148002532,0.589676985339609,0.674586337154561,0.811440485554012,0.241177159752417,0.50925170356284,0.287696137450811,0.486405680325106,0.274561413188081,1.43768206527355,1.86070473834252,1.87222603868736,0.757736633841335,0.358794827043824,0,2.21703828199926,2.65287976478679,3.09633455239849,3.56464680127895,1.87752198630802,2.34508760418542,4.76087281772027,2.34160377429359,2.67979744980525,5.53661724121937,3.34855014180723,1.80249646187312,1.03610989119537,2.60368305446721,0,0,0,0.827810238914197,2.40825884981688,3.16471553798949,1.63934945376675,0.757412781613119,7.2566890465739,9.37052986311932,8.83235930704476,13.1432838873904,10.0259403337077,8.77537245445381,7.2865926301481,7.3063964477828,6.7198922250909,2.24924921495265,0.851640511249612,3.38324646967785,2.93196526836437,2.14461159864296,0,2.18502572539483,1.81394134178851,0.377210159511796,0.590603785761546,0.922305443831782,1.29214146584111,1.09060118843252,1.06949213515416,0.316036757935816,0,1.03135543248187,2.7235168460303,4.50152735078276,4.01011919726539,2.57204442037911,1.41872186913819,2.49716344642899,3.62007845324666,4.26250928760439,3.28540391289194,0,0.661585194164886,1.15420377059036,0.807322133479528,0.904693873922338,1.19372344003136,0.984845398470368,0.291480836629851,4.82105785227325,1.02522528478712,5.36605856704379,2.40752885580625,0.941842285023455,0,0.228778173206523,0.509935289981566,0.559805809294632,0.552799895217695,0,6.48488786841327,2.23651413839534,1.51207477150522,1.04544148007234,0.655087691238533,1.21377911746339,0.826534557253359,0.785267825952089,0.388844919875379,0,0,3.73791365109947,3.47462829959905,2.52786544847262,2.19571699912143,1.520605129417,2.8165737274981,1.5624526181274,2.09718688851422,0.241584120826006,0.288030006257865,0.632022241256357,1.82452693761148,0.616265742988964,0.25984164595559,0,0.79472541912506,0.120195449519969,0.443068581523732,0.201932899896295,0.15241361331,0,0.194915761479505,0.0962118416403295,0.233753804363138,0.680191150845634,1.10992976687032,0.897138566094757,1.00730769818447,1.15913756419314,0.563047426353546,1.09890974560359,0.643105137237198,1.50471631210609,0.564751842617067,0.460325236507177,0,0.859265911718438,2.05524755931193,3.7769694869485,1.35004500046361,2.70192721934532,3.62513927187364,3.62432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| ||
|short_description=p2@Sall2 | |short_description=p2@Sall2 | ||
}} | }} |
Latest revision as of 01:17, 26 September 2015
Short description: | p2@Sall2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sall2_5end |
Coexpression cluster: | NA |
Association with transcript: | 92bp_to_ENSMUST00000163383, uc007tpe.1_5end |
EntrezGene: | Sall2 |
Link to Zenbu: | ZENBU |
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CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.15e-19 | 44 |
neurectodermal cell | 1.15e-19 | 44 |
neural cell | 1.71e-19 | 43 |
neuron | 2.03e-18 | 33 |
neuronal stem cell | 2.03e-18 | 33 |
neuroblast | 2.03e-18 | 33 |
electrically signaling cell | 2.03e-18 | 33 |
electrically responsive cell | 4.20e-17 | 39 |
electrically active cell | 4.20e-17 | 39 |
CNS neuron (sensu Vertebrata) | 1.39e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.39e-11 | 23 |
embryonic cell | 3.72e-10 | 70 |
autonomic neuron | 3.44e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.40e-25 | 75 |
central nervous system | 3.79e-24 | 73 |
ectoderm-derived structure | 6.94e-21 | 95 |
ectoderm | 6.94e-21 | 95 |
presumptive ectoderm | 6.94e-21 | 95 |
neurectoderm | 2.72e-16 | 64 |
neural plate | 2.72e-16 | 64 |
presumptive neural plate | 2.72e-16 | 64 |
structure with developmental contribution from neural crest | 1.36e-15 | 92 |
regional part of nervous system | 3.12e-14 | 54 |
ecto-epithelium | 1.73e-13 | 73 |
neural tube | 5.79e-13 | 52 |
neural rod | 5.79e-13 | 52 |
future spinal cord | 5.79e-13 | 52 |
neural keel | 5.79e-13 | 52 |
brain | 2.67e-10 | 47 |
future brain | 2.67e-10 | 47 |
regional part of brain | 4.16e-10 | 46 |
pre-chordal neural plate | 1.04e-09 | 49 |
tube | 3.49e-09 | 114 |
anterior neural tube | 1.76e-08 | 40 |
peripheral nervous system | 2.02e-08 | 11 |
anatomical conduit | 2.32e-08 | 122 |
autonomic nervous system | 3.44e-08 | 9 |
regional part of forebrain | 4.31e-08 | 39 |
forebrain | 4.31e-08 | 39 |
future forebrain | 4.31e-08 | 39 |
gray matter | 4.54e-07 | 34 |