FFCP PHASE1:Mm9::chr14:52935788..52935817,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=50524 | |EntrezGene=50524 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=E9Q3Q0,Q8BP69 | |UniProt=E9Q3Q0,Q8BP69 | ||
|association_with_transcript=92bp_to_ENSMUST00000163383,uc007tpe.1_5end | |association_with_transcript=92bp_to_ENSMUST00000163383,uc007tpe.1_5end | ||
|cluster_id=chr14:52935788..52935817,- | |||
|description=CAGE_peak_2_at_Sall2_5end | |description=CAGE_peak_2_at_Sall2_5end | ||
|id=chr14:52935788..52935817,- | |id=chr14:52935788..52935817,- | ||
|ontology_enrichment_celltype=CL:0000221!1.21e-17!44;CL:0000133!1.21e-17!44;CL:0002319!1.74e-17!43;CL:0000055!6.86e-17!50;CL:0000540!8.00e-17!33;CL:0000047!8.00e-17!33;CL:0000031!8.00e-17!33;CL:0000404!8.00e-17!33;CL:0000393!2.47e-16!39;CL:0000211!2.47e-16!39;CL:0000117!1.23e-10!23;CL:0000337!1.23e-10!23;CL:0002321!3.01e-08!70;CL:0000220!3.01e-08!70;CL:0000107!1.46e-07!9 | |ontology_enrichment_celltype=CL:0000221!1.21e-17!44;CL:0000133!1.21e-17!44;CL:0002319!1.74e-17!43;CL:0000055!6.86e-17!50;CL:0000540!8.00e-17!33;CL:0000047!8.00e-17!33;CL:0000031!8.00e-17!33;CL:0000404!8.00e-17!33;CL:0000393!2.47e-16!39;CL:0000211!2.47e-16!39;CL:0000117!1.23e-10!23;CL:0000337!1.23e-10!23;CL:0002321!3.01e-08!70;CL:0000220!3.01e-08!70;CL:0000107!1.46e-07!9 | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,1.15e-19,44;CL:0000133,1.15e-19,44;CL:0002319,1.71e-19,43;CL:0000540,2.03e-18,33;CL:0000047,2.03e-18,33;CL:0000031,2.03e-18,33;CL:0000404,2.03e-18,33;CL:0000393,4.20e-17,39;CL:0000211,4.20e-17,39;CL:0000117,1.39e-11,23;CL:0000337,1.39e-11,23;CL:0002321,3.72e-10,70;CL:0000107,3.44e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.33e-22!75;UBERON:0001016!1.33e-22!75;UBERON:0001017!5.20e-22!73;UBERON:0005743!5.20e-22!73;UBERON:0004121!1.78e-20!102;UBERON:0000924!1.78e-20!102;UBERON:0006601!1.78e-20!102;UBERON:0002346!2.72e-15!71;UBERON:0003075!2.72e-15!71;UBERON:0007284!2.72e-15!71;UBERON:0001049!4.05e-12!52;UBERON:0005068!4.05e-12!52;UBERON:0006241!4.05e-12!52;UBERON:0007135!4.05e-12!52;UBERON:0000033!1.02e-11!63;UBERON:0000955!2.89e-11!50;UBERON:0006238!2.89e-11!50;UBERON:0002616!4.37e-11!49;UBERON:0000025!2.66e-10!114;UBERON:0004111!1.32e-09!122;UBERON:0003056!3.55e-09!49;UBERON:0000468!3.36e-08!333;UBERON:0003080!4.97e-08!40;UBERON:0000010!9.04e-08!11;UBERON:0002780!1.12e-07!39;UBERON:0001890!1.12e-07!39;UBERON:0006240!1.12e-07!39;UBERON:0002410!1.46e-07!9;UBERON:0000922!2.84e-07!328;UBERON:0002020!9.60e-07!34 | |ontology_enrichment_uberon=UBERON:0000073!1.33e-22!75;UBERON:0001016!1.33e-22!75;UBERON:0001017!5.20e-22!73;UBERON:0005743!5.20e-22!73;UBERON:0004121!1.78e-20!102;UBERON:0000924!1.78e-20!102;UBERON:0006601!1.78e-20!102;UBERON:0002346!2.72e-15!71;UBERON:0003075!2.72e-15!71;UBERON:0007284!2.72e-15!71;UBERON:0001049!4.05e-12!52;UBERON:0005068!4.05e-12!52;UBERON:0006241!4.05e-12!52;UBERON:0007135!4.05e-12!52;UBERON:0000033!1.02e-11!63;UBERON:0000955!2.89e-11!50;UBERON:0006238!2.89e-11!50;UBERON:0002616!4.37e-11!49;UBERON:0000025!2.66e-10!114;UBERON:0004111!1.32e-09!122;UBERON:0003056!3.55e-09!49;UBERON:0000468!3.36e-08!333;UBERON:0003080!4.97e-08!40;UBERON:0000010!9.04e-08!11;UBERON:0002780!1.12e-07!39;UBERON:0001890!1.12e-07!39;UBERON:0006240!1.12e-07!39;UBERON:0002410!1.46e-07!9;UBERON:0000922!2.84e-07!328;UBERON:0002020!9.60e-07!34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,8.40e-25,75;UBERON:0001017,3.79e-24,73;UBERON:0004121,6.94e-21,95;UBERON:0000924,6.94e-21,95;UBERON:0006601,6.94e-21,95;UBERON:0002346,2.72e-16,64;UBERON:0003075,2.72e-16,64;UBERON:0007284,2.72e-16,64;UBERON:0010314,1.36e-15,92;UBERON:0000073,3.12e-14,54;UBERON:0010371,1.73e-13,73;UBERON:0001049,5.79e-13,52;UBERON:0005068,5.79e-13,52;UBERON:0006241,5.79e-13,52;UBERON:0007135,5.79e-13,52;UBERON:0000955,2.67e-10,47;UBERON:0006238,2.67e-10,47;UBERON:0002616,4.16e-10,46;UBERON:0003056,1.04e-09,49;UBERON:0000025,3.49e-09,114;UBERON:0003080,1.76e-08,40;UBERON:0000010,2.02e-08,11;UBERON:0004111,2.32e-08,122;UBERON:0002410,3.44e-08,9;UBERON:0002780,4.31e-08,39;UBERON:0001890,4.31e-08,39;UBERON:0006240,4.31e-08,39;UBERON:0002020,4.54e-07,34 | |||
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| ||
|short_description=p2@Sall2 | |short_description=p2@Sall2 | ||
}} | }} |
Latest revision as of 01:17, 26 September 2015
Short description: | p2@Sall2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sall2_5end |
Coexpression cluster: | NA |
Association with transcript: | 92bp_to_ENSMUST00000163383, uc007tpe.1_5end |
EntrezGene: | Sall2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 1.15e-19 | 44 |
neurectodermal cell | 1.15e-19 | 44 |
neural cell | 1.71e-19 | 43 |
neuron | 2.03e-18 | 33 |
neuronal stem cell | 2.03e-18 | 33 |
neuroblast | 2.03e-18 | 33 |
electrically signaling cell | 2.03e-18 | 33 |
electrically responsive cell | 4.20e-17 | 39 |
electrically active cell | 4.20e-17 | 39 |
CNS neuron (sensu Vertebrata) | 1.39e-11 | 23 |
neuroblast (sensu Vertebrata) | 1.39e-11 | 23 |
embryonic cell | 3.72e-10 | 70 |
autonomic neuron | 3.44e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
nervous system | 8.40e-25 | 75 |
central nervous system | 3.79e-24 | 73 |
ectoderm-derived structure | 6.94e-21 | 95 |
ectoderm | 6.94e-21 | 95 |
presumptive ectoderm | 6.94e-21 | 95 |
neurectoderm | 2.72e-16 | 64 |
neural plate | 2.72e-16 | 64 |
presumptive neural plate | 2.72e-16 | 64 |
structure with developmental contribution from neural crest | 1.36e-15 | 92 |
regional part of nervous system | 3.12e-14 | 54 |
ecto-epithelium | 1.73e-13 | 73 |
neural tube | 5.79e-13 | 52 |
neural rod | 5.79e-13 | 52 |
future spinal cord | 5.79e-13 | 52 |
neural keel | 5.79e-13 | 52 |
brain | 2.67e-10 | 47 |
future brain | 2.67e-10 | 47 |
regional part of brain | 4.16e-10 | 46 |
pre-chordal neural plate | 1.04e-09 | 49 |
tube | 3.49e-09 | 114 |
anterior neural tube | 1.76e-08 | 40 |
peripheral nervous system | 2.02e-08 | 11 |
anatomical conduit | 2.32e-08 | 122 |
autonomic nervous system | 3.44e-08 | 9 |
regional part of forebrain | 4.31e-08 | 39 |
forebrain | 4.31e-08 | 39 |
future forebrain | 4.31e-08 | 39 |
gray matter | 4.54e-07 | 34 |