Personal tools

FFCP PHASE1:Mm9::chr2:158492867..158492922,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(3 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=228852
|EntrezGene=228852
|HGNC=
|HGNC=
|MCL_coexpression_id=3325
|MCL_coexpression_id=3325
|TSSclassifier=NA
|UniProt=E9Q5S7,Q544H9,Q8VHQ3,Q8C9G4
|UniProt=E9Q5S7,Q544H9,Q8VHQ3,Q8C9G4
|association_with_transcript=0bp_to_ENSMUST00000163423,NM_001159662,uc008nqo.2,uc008nqp.2_5end
|association_with_transcript=0bp_to_ENSMUST00000163423,NM_001159662,uc008nqo.2,uc008nqp.2_5end
|cluster_id=chr2:158492867..158492922,+
|description=CAGE_peak_1_at_Ppp1r16b_5end
|description=CAGE_peak_1_at_Ppp1r16b_5end
|id=chr2:158492867..158492922,+
|id=chr2:158492867..158492922,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0007811!4.01e-09!86;UBERON:0002020!8.97e-09!34;UBERON:0000477!1.91e-08!154;UBERON:0001049!2.23e-08!52;UBERON:0005068!2.23e-08!52;UBERON:0006241!2.23e-08!52;UBERON:0007135!2.23e-08!52;UBERON:0000955!3.86e-08!50;UBERON:0006238!3.86e-08!50;UBERON:0000064!6.96e-08!99;UBERON:0002616!1.21e-07!49;UBERON:0000153!2.26e-07!94;UBERON:0002791!2.76e-07!29;UBERON:0003528!2.76e-07!29;UBERON:0001893!2.76e-07!29
|ontology_enrichment_uberon=UBERON:0007811!4.01e-09!86;UBERON:0002020!8.97e-09!34;UBERON:0000477!1.91e-08!154;UBERON:0001049!2.23e-08!52;UBERON:0005068!2.23e-08!52;UBERON:0006241!2.23e-08!52;UBERON:0007135!2.23e-08!52;UBERON:0000955!3.86e-08!50;UBERON:0006238!3.86e-08!50;UBERON:0000064!6.96e-08!99;UBERON:0002616!1.21e-07!49;UBERON:0000153!2.26e-07!94;UBERON:0002791!2.76e-07!29;UBERON:0003528!2.76e-07!29;UBERON:0001893!2.76e-07!29
|ontology_enrichment_uberon_v019_2=UBERON:0000073,4.09e-09,54;UBERON:0002020,9.04e-09,34;UBERON:0001049,2.07e-08,52;UBERON:0005068,2.07e-08,52;UBERON:0006241,2.07e-08,52;UBERON:0007135,2.07e-08,52;UBERON:0003528,2.80e-07,29;UBERON:0002791,2.80e-07,29;UBERON:0001893,2.80e-07,29;UBERON:0000955,4.97e-07,47;UBERON:0006238,4.97e-07,47;UBERON:0000065,8.92e-07,41
|phase1_expression=0.80074423552397,27.5690572035095,18.1999695755814,18.7527811010235,13.5241847085514,6.21153306073992,8.64366770203445,82.2515570322841,369.288818203822,363.034080325412,95.0259723651553,92.6154765935856,68.4802919724823,58.1345676086333,31.9785371343036,33.4084191193213,8.39474253753776,140.380663584416,165.360006928521,156.175391861675,57.8294373027274,12.7092417537133,12.015190300391,15.8392498565473,12.6175104586944,10.3361753540704,6.03066794622705,7.11055067863434,1.90023419456374,5.54466285471848,3.76941868114018,0,0,0,1.1554064790051,0.332469290716985,1.02084678131185,1.25559489221072,0,0.523523743973798,1.76469446409304,0.683045484958446,0.971020706062307,0,0,0,1.56478268869608,0,0,0.58328969722285,0.979904951377538,5.75010257459886,224.660909511309,184.241984070881,119.313298695575,0.771778308107841,0.85960031981627,0,12.1389876515759,13.7537654610729,12.0427966666174,0,0,0,0.988866362566974,0,9.88680364710736,14.9845139075406,21.4637497478549,35.5065617812346,29.8661445118962,70.5557931477395,77.3039893330647,20.7009450673272,14.6643570657902,16.5459381589804,94.6996576594743,86.1889532075017,91.5494938207211,10.8146755938759,10.0636407962651,6.25096044668112,81.2422527094019,56.276261003168,73.4959571806457,48.6137166031552,38.8674688581551,15.2847545576746,7.26971455998567,4.23200736597999,97.6843326924654,39.5794983411438,0,1.61910957491345,3.89865850468601,2.68816132258401,19.6622188184453,0,0.259786004602869,0,2.11265129665021,0,0,0,0.216491041011214,0,0,28.2034182906078,262.821951901879,14.5473296283528,7.45986905094384,6.08930956624282,3.68984795609694,4.37095657602605,8.93674174231356,11.4356598110005,6.42706916109372,20.2439099687876,16.8076004870476,7.44127509758082,25.838457659866,20.8496358848145,7.45567044872489,160.736657559339,147.450481596672,13.2837668708468,8.74650408893218,4.19931911695385,4.06624726633807,119.682720884453,298.747893640563,32.2931684930062,109.16167308075,122.487704061228,95.9980765865168,146.017136760982,4.48093200941392,19.4074874151745,2.0217820674694,7.78634866779954,2.08192708740326,1.37941262660084,3.78130472591233,5.57607825992146,6.93972291343544,4.86832137082429,6.27801554550183,21.2136764005993,3.44908788692548,3.78212160335639,2.46331573829528,2.41115305670332,3.33656699070717,5.57203466435466,4.93877127379064,11.5439874754726,1.40442637462647,0.257347907114715,1.13665399758237,3.52113813310353,4.22146907965973,4.32148947506436,8.52281048106757,7.67380503814875,8.33042409591843,7.67362017676346,15.5598572811779,9.10769670463922,11.8483091937706,15.1034066952768,25.6177438164904,23.9767979377545,23.9309625667245,21.8756462579406,117.131501350219,26.3435807690968,32.711459515396,12.9580777665137,3.83918850963421,3.94802342162745,3.99489130098489,3.42861991859682,4.44756087689741,4.75564065281398,9.96511029243474,3.62337700392824,5.52937459360593,8.95304124185179,10.7230247915516,6.29173586057955,4.97117514711797,6.96994456390285,11.0007382552787,13.2528274627285,23.6686244913469,12.8300336542548,11.4431967428899,15.5000161957604,17.2635746349222,35.5740456630841,20.2528358915373,27.5175675545615,5.63259991465583,2.50267658574141,3.14494392181125,2.69834534861824,2.84004169943904,3.13530307678142,5.0925170356284,11.5078454980324,7.94462611197673,4.66754402419738,10.0637744569148,13.3970741160661,8.7370548472077,9.09283960609602,7.3552939543984,6.75420929908714,105.494071585131,3.97931964718018,12.0594082567099,13.2401166904647,26.0506175600237,57.287140045101,73.7935286746643,47.2223427815873,74.246152874016,59.7954662051692,93.7594039706024,130.435198513727,112.417923194698,110.511880756275,0,0,10.8188140064188,9.93372286697037,99.541365792431,138.778636925169,0,14.1383719234449,1.26203287766503,0.390438744296638,0.861693590931196,0,0,0.849229592366497,0.404810701674894,0.292255857911312,1.18586333383957,171.585582969245,17.6005705658253,4.62970569534864,5.53815661802159,11.2179683621324,9.2921596837974,3.15614827001476,4.83717691143602,3.39489143560617,5.02013217897314,5.84126781093462,9.8202751403924,5.45300594216258,6.77345018930971,10.1131762539461,6.32511651449993,6.18813259489121,10.8940673841212,4.68158844481407,2.19909762430683,3.00071849044229,5.85222771019503,6.0645397984704,6.41741180348272,8.22055362609418,6.10146440965647,6.77862626764225,1.10264199027481,9.72828892354732,6.94297034792394,4.34253059482722,3.70054266409723,4.92422699235184,7.28702091574627,130.539412615399,41.8633657954739,9.90656966223468,10.7412825874433,17.5182665014363,36.2239703460717,38.4347330986958,29.5762468189308,32.1888340344413,31.5095940274086,3.81868247206045,4.4287039101359,3.65975040828328,3.02414954301044,4.80903080833278,5.24070152990826,2.56242258131159,6.11635572367486,4.18809507174447,4.01806417204558,9.94142900939081,3.38215763210514,45.1539969052816,31.4371131868485,35.7790186553048,30.7400379877,37.339303733462,37.5543163666413,46.3527610044462,33.2404121829503,7.48910774560619,4.89651010638371,104.599680927927,11.149886840959,9.24398614483445,20.7873316764472,42.2503001775256,60.2004504987233,60.6987020075843,57.5989155980851,57.0460442207034,64.0137175901999,77.5353363702304,101.940943253781,104.486060021398,112.669333703032,8.84248496099324,0,0.717710852875806,0.167884616364078,6.37525660306228,9.57180624801028,6.59345847362154,2.78678892802786,5.517293144389,67.2054692714309,66.7471592935406,69.320357126167,59.6330542732596,123.999936078486,117.841447992793,115.428847539639,98.1700223028801,128.692444151514,109.247425779634,1.97195960409936,1.99512436700516,2.39027048055788,7.77941494618541,5.03071590307158,8.64064489715066,12.4458167568905,14.2164189494837,15.0832028508153,13.1402550117175,14.4483200937437,13.9583492625696,10.3005658216871,13.0611310905933,12.4634967633681,13.8125170472091,15.9920369803901,14.0823730938505,11.5384052224926,12.953504971827,9.60033906679163,11.8908790126756,11.921809497366,12.7904846636449,14.3987352035456,12.0152743206181,12.4391021553485,8.41823076601097,13.8520196122779,15.7119836064167,14.9480122836459,14.3816544268323,9.41231399290286,11.6202630889474,10.4169569929816,13.739581786587,12.3983752476066,10.9584237564632,10.3295699317175,9.70602244125868,15.7670128221887
|phase1_expression=0.80074423552397,27.5690572035095,18.1999695755814,18.7527811010235,13.5241847085514,6.21153306073992,8.64366770203445,82.2515570322841,369.288818203822,363.034080325412,95.0259723651553,92.6154765935856,68.4802919724823,58.1345676086333,31.9785371343036,33.4084191193213,8.39474253753776,140.380663584416,165.360006928521,156.175391861675,57.8294373027274,12.7092417537133,12.015190300391,15.8392498565473,12.6175104586944,10.3361753540704,6.03066794622705,7.11055067863434,1.90023419456374,5.54466285471848,3.76941868114018,0,0,0,1.1554064790051,0.332469290716985,1.02084678131185,1.25559489221072,0,0.523523743973798,1.76469446409304,0.683045484958446,0.971020706062307,0,0,0,1.56478268869608,0,0,0.58328969722285,0.979904951377538,5.75010257459886,224.660909511309,184.241984070881,119.313298695575,0.771778308107841,0.85960031981627,0,12.1389876515759,13.7537654610729,12.0427966666174,0,0,0,0.988866362566974,0,9.88680364710736,14.9845139075406,21.4637497478549,35.5065617812346,29.8661445118962,70.5557931477395,77.3039893330647,20.7009450673272,14.6643570657902,16.5459381589804,94.6996576594743,86.1889532075017,91.5494938207211,10.8146755938759,10.0636407962651,6.25096044668112,81.2422527094019,56.276261003168,73.4959571806457,48.6137166031552,38.8674688581551,15.2847545576746,7.26971455998567,4.23200736597999,97.6843326924654,39.5794983411438,0,1.61910957491345,3.89865850468601,2.68816132258401,19.6622188184453,0,0.259786004602869,0,2.11265129665021,0,0,0,0.216491041011214,0,0,28.2034182906078,262.821951901879,14.5473296283528,7.45986905094384,6.08930956624282,3.68984795609694,4.37095657602605,8.93674174231356,11.4356598110005,6.42706916109372,20.2439099687876,16.8076004870476,7.44127509758082,25.838457659866,20.8496358848145,7.45567044872489,160.736657559339,147.450481596672,13.2837668708468,8.74650408893218,4.19931911695385,4.06624726633807,119.682720884453,298.747893640563,32.2931684930062,109.16167308075,122.487704061228,95.9980765865168,146.017136760982,4.48093200941392,19.4074874151745,2.0217820674694,7.78634866779954,2.08192708740326,1.37941262660084,3.78130472591233,5.57607825992146,6.93972291343544,4.86832137082429,6.27801554550183,21.2136764005993,3.44908788692548,3.78212160335639,2.46331573829528,2.41115305670332,3.33656699070717,5.57203466435466,4.93877127379064,11.5439874754726,1.40442637462647,0.257347907114715,1.13665399758237,3.52113813310353,4.22146907965973,4.32148947506436,8.52281048106757,7.67380503814875,8.33042409591843,7.67362017676346,15.5598572811779,9.10769670463922,11.8483091937706,15.1034066952768,25.6177438164904,23.9767979377545,23.9309625667245,21.8756462579406,117.131501350219,26.3435807690968,32.711459515396,12.9580777665137,3.83918850963421,3.94802342162745,3.99489130098489,3.42861991859682,4.44756087689741,4.75564065281398,9.96511029243474,3.62337700392824,5.52937459360593,8.95304124185179,10.7230247915516,6.29173586057955,4.97117514711797,6.96994456390285,11.0007382552787,13.2528274627285,23.6686244913469,12.8300336542548,11.4431967428899,15.5000161957604,17.2635746349222,35.5740456630841,20.2528358915373,27.5175675545615,5.63259991465583,2.50267658574141,3.14494392181125,2.69834534861824,2.84004169943904,3.13530307678142,5.0925170356284,11.5078454980324,7.94462611197673,4.66754402419738,10.0637744569148,13.3970741160661,8.7370548472077,9.09283960609602,7.3552939543984,6.75420929908714,105.494071585131,3.97931964718018,12.0594082567099,13.2401166904647,26.0506175600237,57.287140045101,73.7935286746643,47.2223427815873,74.246152874016,59.7954662051692,93.7594039706024,130.435198513727,112.417923194698,110.511880756275,0,0,10.8188140064188,9.93372286697037,99.541365792431,138.778636925169,0,14.1383719234449,1.26203287766503,0.390438744296638,0.861693590931196,0,0,0.849229592366497,0.404810701674894,0.292255857911312,1.18586333383957,171.585582969245,17.6005705658253,4.62970569534864,5.53815661802159,11.2179683621324,9.2921596837974,3.15614827001476,4.83717691143602,3.39489143560617,5.02013217897314,5.84126781093462,9.8202751403924,5.45300594216258,6.77345018930971,10.1131762539461,6.32511651449993,6.18813259489121,10.8940673841212,4.68158844481407,2.19909762430683,3.00071849044229,5.85222771019503,6.0645397984704,6.41741180348272,8.22055362609418,6.10146440965647,6.77862626764225,1.10264199027481,9.72828892354732,6.94297034792394,4.34253059482722,3.70054266409723,4.92422699235184,7.28702091574627,130.539412615399,41.8633657954739,9.90656966223468,10.7412825874433,17.5182665014363,36.2239703460717,38.4347330986958,29.5762468189308,32.1888340344413,31.5095940274086,3.81868247206045,4.4287039101359,3.65975040828328,3.02414954301044,4.80903080833278,5.24070152990826,2.56242258131159,6.11635572367486,4.18809507174447,4.01806417204558,9.94142900939081,3.38215763210514,45.1539969052816,31.4371131868485,35.7790186553048,30.7400379877,37.339303733462,37.5543163666413,46.3527610044462,33.2404121829503,7.48910774560619,4.89651010638371,104.599680927927,11.149886840959,9.24398614483445,20.7873316764472,42.2503001775256,60.2004504987233,60.6987020075843,57.5989155980851,57.0460442207034,64.0137175901999,77.5353363702304,101.940943253781,104.486060021398,112.669333703032,8.84248496099324,0,0.717710852875806,0.167884616364078,6.37525660306228,9.57180624801028,6.59345847362154,2.78678892802786,5.517293144389,67.2054692714309,66.7471592935406,69.320357126167,59.6330542732596,123.999936078486,117.841447992793,115.428847539639,98.1700223028801,128.692444151514,109.247425779634,1.97195960409936,1.99512436700516,2.39027048055788,7.77941494618541,5.03071590307158,8.64064489715066,12.4458167568905,14.2164189494837,15.0832028508153,13.1402550117175,14.4483200937437,13.9583492625696,10.3005658216871,13.0611310905933,12.4634967633681,13.8125170472091,15.9920369803901,14.0823730938505,11.5384052224926,12.953504971827,9.60033906679163,11.8908790126756,11.921809497366,12.7904846636449,14.3987352035456,12.0152743206181,12.4391021553485,8.41823076601097,13.8520196122779,15.7119836064167,14.9480122836459,14.3816544268323,9.41231399290286,11.6202630889474,10.4169569929816,13.739581786587,12.3983752476066,10.9584237564632,10.3295699317175,9.70602244125868,15.7670128221887
|short_description=p1@Ppp1r16b
|short_description=p1@Ppp1r16b
}}
}}

Latest revision as of 01:20, 26 September 2015

Short description:p1@Ppp1r16b
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Ppp1r16b_5end
Coexpression cluster:MCL_coexpression_mm9:3325
Association with transcript: 0bp_to_ENSMUST00000163423, NM_001159662, uc008nqo.2, uc008nqp.2_5end
EntrezGene:Ppp1r16b
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Ppp1r16b

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.80
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I527.57
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I618.20
CD326+ enterocyte, pool1.CNhs13542.11848-124I318.75
CD326+ enterocyte, pool2.CNhs13197.11849-124I413.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.21
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I88.64
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E982.25
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7369.29
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2363.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E695.03
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F192.62
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E468.48
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E858.13
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A131.98
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A333.41
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A58.39
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A2140.38
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A4165.36
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A6156.18
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A357.83
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H212.71
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I912.02
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D115.84
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D212.62
GP2+ M cell, pool1.CNhs13228.11845-124H910.34
GP2+ M cell, pool2.CNhs13231.11846-124I16.03
GP2+ M cell, pool3.CNhs13240.11847-124I27.11
Ileum epithelium, pool1.CNhs13199.10252-104B91.90
Ileum epithelium, pool2.CNhs13232.10253-104C15.54
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.77
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F51.16
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.33
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F71.02
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G81.26
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G91.76
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.68
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.97
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.58
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.98
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A2224.66
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I9184.24
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A1119.31
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.77
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.86
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C312.14
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.99
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C89.89
Mouse Microglia, donor2.CNhs12634.11736-123E814.98
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D521.46
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F535.51
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D929.87
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F170.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D577.30
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D220.70
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F214.66
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D616.55
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D394.70
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F386.19
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D791.55
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D410.81
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F410.06
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E481.24
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E556.28
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I673.50
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D648.61
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F638.87
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E115.28
Mouse Schwann, donor1.CNhs12507.11728-123D97.27
Mouse Schwann, donor2.CNhs12573.11746-123F94.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G397.68
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F739.58
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C81.62
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.90
Mouse hepatocyte, donor8.CNhs13091.11824-124F62.69
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A719.66
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G62.11
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B628.20
accessory axillary lymph node, adult.CNhs10475.1063-29H9262.82
adrenal gland, adult.CNhs10508.49-24D714.55
adrenal gland, embryo E14.CNhs11038.406-44C57.46
adrenal gland, embryo E16.CNhs11004.1254-43D66.09
adrenal gland, embryo E17.CNhs11043.1263-45I13.69
adrenal gland, embryo E18.CNhs11026.1262-18F54.37
adrenal gland, neonate N00.CNhs11191.1311-23C18.94
adrenal gland, neonate N25.CNhs11223.1377-27I311.44
amnion, adult pregnant day17.5.CNhs10488.583-22A86.43
aorta, adult.CNhs10498.46-23H120.24
bone (os femoris), adult.CNhs10483.56-12G216.81
bone (os femoris), neonate N02.CNhs11227.1985-43F57.44
bone (os femoris), neonate N16.CNhs11225.1525-43A625.84
bone (os femoris), neonate N20.CNhs11195.1350-25C320.85
cecum, adult.CNhs10467.37-13H47.46
cerebellum, adult.CNhs10494.15-8B2160.74
cerebellum, neonate N30.CNhs11135.1395-42I2147.45
colon, adult.CNhs10468.36-18H713.28
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C78.75
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D14.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.07
corpora quadrigemina, adult.CNhs10501.16-22A4119.68
corpus striatum, adult.CNhs10487.19-21D8298.75
corpus striatum, neonate N00.CNhs11226.630-43F132.29
cortex, adult.CNhs10473.12-14D5109.16
cortex, neonate N30.CNhs11107.1392-42F2122.49
diencephalon, adult.CNhs10482.20-12F296.00
diencephalon, neonate N30.CNhs11201.1388-42B2146.02
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B14.48
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A219.41
epididymis, adult.CNhs10490.58-23B22.02
eyeball, adult.CNhs10484.31-12G47.79
eyeball, embryo E12.CNhs11016.345-16C62.08
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C93.78
eyeball, embryo E17.CNhs11023.1261-18D45.58
eyeball, neonate N00.CNhs11207.633-15C66.94
eyeball, neonate N01.CNhs11140.1532-43E74.87
eyeball, neonate N02.CNhs11205.1551-44G86.28
eyeball, neonate N16.CNhs11188.777-19A221.21
forelimb, embryo E11.CNhs10596.335-25E23.45
forelimb, embryo E12.CNhs10600.359-14H23.78
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A82.41
forelimb, embryo E15.CNhs11007.437-20E73.34
forelimb, embryo E17.CNhs10598.1517-43C45.57
forelimb, embryo E18.CNhs11008.1520-43B54.94
gonad, embryo E13.CNhs11044.1564-45I611.54
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C81.40
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.26
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D51.14
heart, embryo E11.CNhs10586.331-24E93.52
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I94.32
heart, embryo E14.CNhs10597.403-26D48.52
heart, embryo E15.CNhs11017.431-16C87.67
heart, embryo E16.CNhs11021.457-17C68.33
heart, embryo E17.CNhs11025.479-18E57.67
heart, embryo E18.CNhs11030.1283-20G315.56
heart, neonate N00.CNhs11213.639-21E39.11
heart, neonate N03.CNhs11221.1349-25I211.85
heart, neonate N10.CNhs11118.749-24G115.10
heart, neonate N16.CNhs11209.782-15G125.62
heart, neonate N20.CNhs11127.821-26I623.98
heart, neonate N25.CNhs11196.1351-25D323.93
heart, neonate N30.CNhs11202.1390-42D221.88
hippocampus, adult.CNhs10478.13-16E8117.13
hippocampus, neonate N00.CNhs11228.627-43G126.34
intestinal mucosa, adult.CNhs10506.860-29I332.71
intestine, adult.CNhs10496.178-9A312.96
intestine, embryo E12.CNhs11019.1251-16I53.84
intestine, embryo E13.CNhs11010.381-16D53.95
intestine, embryo E15.CNhs10602.976-16D83.99
intestine, embryo E16.CNhs10585.463-22H43.43
intestine, embryo E17.CNhs10582.482-18D34.45
intestine, embryo E18.CNhs10526.1289-20F74.76
intestine, neonate N00.CNhs11126.644-26D19.97
intestine, neonate N01.CNhs11192.1322-23E93.62
intestine, neonate N06.CNhs11102.688-20B85.53
intestine, neonate N07.CNhs11095.720-20F28.95
intestine, neonate N10.CNhs11098.755-23A510.72
intestine, neonate N20.CNhs11187.827-18D16.29
intestine, neonate N25.CNhs11121.1352-25E34.97
intestine, neonate N30.CNhs11131.1384-42G16.97
kidney, embryo E14.CNhs10606.411-4I911.00
kidney, embryo E15.CNhs10997.434-16F813.25
kidney, embryo E16.CNhs10584.464-22A523.67
kidney, embryo E17.CNhs11028.483-18I212.83
kidney, embryo E18.CNhs11001.1288-20C711.44
kidney, neonate N00.CNhs11214.646-21G715.50
kidney, neonate N10.CNhs11206.758-6D517.26
kidney, neonate N20.CNhs11113.832-19I135.57
kidney, neonate N25.CNhs11122.1353-25F320.25
kidney, neonate N30.CNhs11203.1385-42H127.52
liver, adult pregnant day01.CNhs10466.508-5B25.63
liver, embryo E12.CNhs10601.355-15F82.50
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E12.70
liver, embryo E15.CNhs10520.433-16D72.84
liver, embryo E16.CNhs10523.462-17F53.14
liver, embryo E17.CNhs10510.481-18A35.09
liver, embryo E18.CNhs10579.499-43G411.51
liver, neonate N00.CNhs11117.641-24F47.94
liver, neonate N03.CNhs11123.1345-25G24.67
liver, neonate N06.CNhs11101.684-20A810.06
liver, neonate N07.CNhs11103.716-20H213.40
liver, neonate N10.CNhs11115.751-24B98.74
liver, neonate N20.CNhs11220.823-25A39.09
liver, neonate N25.CNhs11198.1368-26H17.36
liver, neonate N30.CNhs11106.1382-42D16.75
lung, adult.CNhs10474.28-22B1105.49
lung, embryo E12.CNhs10522.354-16G23.98
lung, embryo E14.CNhs10604.404-26F812.06
lung, embryo E15.CNhs11020.432-17C513.24
lung, embryo E16.CNhs10998.458-17B626.05
lung, embryo E17.CNhs10605.480-44A657.29
lung, embryo E18.CNhs10583.1287-20I673.79
lung, neonate N00.CNhs11224.640-42C647.22
lung, neonate N06.CNhs11212.683-20E574.25
lung, neonate N07.CNhs11111.715-19A359.80
lung, neonate N10.CNhs11219.750-23E693.76
lung, neonate N20.CNhs11109.822-18A4130.44
lung, neonate N25.CNhs11119.1359-25C7112.42
lung, neonate N30.CNhs11133.1394-42H2110.51
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B610.82
mammary gland, adult pregnant day19.CNhs10476.588-5H29.93
medulla oblongata, adult.CNhs10477.17-12C299.54
medulla oblongata, neonate N30.CNhs11200.1396-42A3138.78
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C214.14
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.86
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.19
olfactory brain, adult.CNhs10489.18-22I9171.59
ovary, adult.CNhs10507.91-2I717.60
ovary, embryo E18.CNhs11040.505-44H74.63
ovary, neonate N00.CNhs11217.1299-22I45.54
oviduct, adult pregnant day01.CNhs10500.988-6G611.22
pancreas, adult.CNhs10486.34-16E49.29
pancreas, embryo E14.CNhs11012.405-44F43.16
pancreas, embryo E15.CNhs11042.1556-45F24.84
pancreas, embryo E16.CNhs11003.460-26E53.39
pancreas, embryo E17.CNhs10599.1558-45G35.02
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G99.82
pancreas, neonate N01.CNhs11138.1531-43D75.45
pancreas, neonate N02.CNhs11139.1539-43D86.77
pancreas, neonate N16.CNhs11136.787-43B610.11
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H56.19
pituitary gland, adult.CNhs10493.21-1G810.89
pituitary gland, embryo E12.CNhs11018.346-16E64.68
pituitary gland, embryo E13.CNhs11009.370-44C72.20
pituitary gland, embryo E14.CNhs11037.398-44A53.00
pituitary gland, embryo E15.CNhs10592.427-16B95.85
pituitary gland, embryo E16.CNhs11036.449-43F66.06
pituitary gland, embryo E17.CNhs11039.1265-44F56.42
pituitary gland, neonate N00.CNhs11190.1308-22E98.22
placenta, adult pregnant day10.CNhs10472.539-13I76.10
placenta, adult pregnant day17.CNhs10464.577-18G36.78
prostate, adult.CNhs10470.859-1F81.10
skin, adult.CNhs10492.30-1C39.73
skin, neonate N00.CNhs11124.650-25G46.94
skin, neonate N03.CNhs11215.662-22H34.34
skin, neonate N06.CNhs11097.693-20I53.70
skin, neonate N10.CNhs11108.762-6C44.92
small intestine, neonate N16.CNhs11114.790-21I17.29
spinal cord, adult.CNhs10505.24-13C9130.54
spleen, adult.CNhs10465.25-2G241.86
spleen, embryo E16.CNhs11035.461-43C19.91
spleen, embryo E18.CNhs11011.1271-21F210.74
spleen, neonate N10.CNhs11116.752-24D117.52
spleen, neonate N20.CNhs11112.824-19H136.22
spleen, neonate N25.CNhs11099.1354-25G338.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C629.58
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C932.19
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D331.51
stomach, adult.CNhs10503.33-1H63.82
stomach, embryo E12.CNhs10588.356-43E34.43
stomach, embryo E15.CNhs10603.1252-16G83.66
stomach, embryo E16.CNhs11022.459-17D43.02
stomach, embryo E17.CNhs11006.1035-18D54.81
stomach, embryo E18.CNhs10999.1286-20C65.24
stomach, neonate N03.CNhs11193.1340-24B82.56
stomach, neonate N07.CNhs11210.718-18A96.12
stomach, neonate N25.CNhs11104.1355-25E44.19
stomach, neonate N30.CNhs11134.1386-42I14.02
submandibular gland, adult.CNhs10469.59-29C19.94
testis, adult.CNhs10504.57-7G53.38
testis, embryo E13.CNhs11031.389-23F545.15
testis, embryo E15.CNhs11034.443-27C531.44
testis, embryo E16.CNhs11033.470-26G535.78
testis, embryo E17.CNhs11029.486-18I530.74
testis, embryo E18.CNhs11027.503-18G537.34
testis, neonate N00.CNhs11189.1300-22B737.55
testis, neonate N07.CNhs11222.726-26I446.35
testis, neonate N10.CNhs11204.763-44D933.24
testis, neonate N20.CNhs11110.839-18H37.49
testis, neonate N30.CNhs11130.1391-42E24.90
thymus, adult.CNhs10471.38-12B5104.60
thymus, embryo E14.CNhs11041.402-44I411.15
thymus, embryo E15.CNhs11005.430-45I29.24
thymus, embryo E16.CNhs11002.456-26C520.79
thymus, embryo E17.CNhs10581.478-18C142.25
thymus, embryo E18.CNhs10595.1273-19G460.20
thymus, neonate N02.CNhs11181.1541-43F860.70
thymus, neonate N03.CNhs11137.2104-43C757.60
thymus, neonate N06.CNhs11197.681-26C457.05
thymus, neonate N07.CNhs11211.713-19D364.01
thymus, neonate N10.CNhs11194.748-24E477.54
thymus, neonate N20.CNhs11186.820-7A2101.94
thymus, neonate N25.CNhs11125.1362-25G7104.49
thymus, neonate N30.CNhs11132.1393-42G2112.67
tongue, adult.CNhs10499.32-1B48.84
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.72
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.17
urinary bladder, adult.CNhs10481.879-12E46.38
uterus, adult pregnant day19.CNhs10497.590-15F59.57
uterus, adult.CNhs10509.92-27E56.59
vagina, adult.CNhs10502.89-27D52.79
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A167.21
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A266.75
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A369.32
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D759.63
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A4124.00
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A5117.84
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A6115.43
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A798.17
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A8128.69
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A9109.25
whole body, embryo E11.CNhs11014.324-5I81.97
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H22.39
whole body, embryo E14.5.CNhs10578.420-27D27.78
whole body, embryo E14.CNhs10519.395-14B15.03
whole body, embryo E16.CNhs10514.453-14F28.64
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.45
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G514.22
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G515.08
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.14
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G514.45
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G513.96
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G510.30
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G513.06
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G512.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G513.81
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G515.99
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G514.08
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G511.54
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G512.95
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.60
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G511.89
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G511.92
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.79
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G512.44
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.42
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.85
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G515.71
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G514.95
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G514.38
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G59.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G511.62
whole body, embryo E17.5.CNhs10513.490-9F910.42
whole body, embryo E17.CNhs10517.475-3I513.74
whole body, embryo E18.CNhs10516.493-3B312.40
whole body, neonate N00.CNhs10525.657-19C210.96
whole body, neonate N01.CNhs10576.659-23C610.33
whole body, neonate N06.CNhs10515.692-21D19.71
whole body, neonate N10.CNhs10518.761-6B415.77





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
regional part of nervous system4.09e-0954
gray matter9.04e-0934
neural tube2.07e-0852
neural rod2.07e-0852
future spinal cord2.07e-0852
neural keel2.07e-0852
brain grey matter2.80e-0729
regional part of telencephalon2.80e-0729
telencephalon2.80e-0729
brain4.97e-0747
future brain4.97e-0747
respiratory tract8.92e-0741
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr2:158492867..158492922,%2B&oldid=4225190"