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FFCP PHASE1:Mm9::chr17:24625528..24625611,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr17:24625528..24625611,+
|DHSsupport=NA
|short_description=p1@Caskin1
|DPIdataset=NA
|description=CAGE_peak_1_at_Caskin1_5end
|association_with_transcript=-116bp_to_ENSMUST00000024958,ENSMUST00000088474,ENSMUST00000115347,NM_027937,uc008awm.1,uc008awo.1,uc008awp.2,uc012amk.1_5end
|EntrezGene=268932
|EntrezGene=268932
|HGNC=
|HGNC=
|MCL_coexpression_id=159
|TSSclassifier=NA
|UniProt=Q6P9K8
|UniProt=Q6P9K8
|association_with_transcript=-116bp_to_ENSMUST00000024958,ENSMUST00000088474,ENSMUST00000115347,NM_027937,uc008awm.1,uc008awo.1,uc008awp.2,uc012amk.1_5end
|cluster_id=chr17:24625528..24625611,+
|description=CAGE_peak_1_at_Caskin1_5end
|id=chr17:24625528..24625611,+
|ontology_enrichment_celltype=CL:0000117!3.60e-15!23;CL:0000337!3.60e-15!23;CL:0000540!9.48e-15!33;CL:0000047!9.48e-15!33;CL:0000031!9.48e-15!33;CL:0000404!9.48e-15!33;CL:0000221!1.24e-12!44;CL:0000133!1.24e-12!44;CL:0002319!2.72e-12!43;CL:0000393!4.11e-10!39;CL:0000211!4.11e-10!39;CL:0000055!2.79e-08!50
|ontology_enrichment_celltype_v019_2=CL:0000117,4.10e-17,23;CL:0000337,4.10e-17,23;CL:0000540,1.24e-16,33;CL:0000047,1.24e-16,33;CL:0000031,1.24e-16,33;CL:0000404,1.24e-16,33;CL:0000221,1.82e-13,44;CL:0000133,1.82e-13,44;CL:0002319,4.41e-13,43;CL:0000393,6.61e-12,39;CL:0000211,6.61e-12,39
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!7.82e-30!73;UBERON:0005743!7.82e-30!73;UBERON:0002346!3.17e-29!71;UBERON:0003075!3.17e-29!71;UBERON:0007284!3.17e-29!71;UBERON:0000073!5.50e-29!75;UBERON:0001016!5.50e-29!75;UBERON:0004121!8.15e-28!102;UBERON:0000924!8.15e-28!102;UBERON:0006601!8.15e-28!102;UBERON:0001049!6.61e-25!52;UBERON:0005068!6.61e-25!52;UBERON:0006241!6.61e-25!52;UBERON:0007135!6.61e-25!52;UBERON:0000033!7.36e-25!63;UBERON:0000955!4.22e-23!50;UBERON:0006238!4.22e-23!50;UBERON:0002616!2.08e-22!49;UBERON:0003056!1.50e-21!49;UBERON:0002020!7.41e-19!34;UBERON:0003080!9.97e-19!40;UBERON:0002780!5.28e-18!39;UBERON:0001890!5.28e-18!39;UBERON:0006240!5.28e-18!39;UBERON:0002791!4.65e-15!29;UBERON:0003528!4.65e-15!29;UBERON:0001893!4.65e-15!29;UBERON:0000153!5.28e-11!94;UBERON:0007811!5.72e-11!86;UBERON:0000956!4.87e-10!21;UBERON:0001869!4.87e-10!21;UBERON:0000203!4.87e-10!21;UBERON:0002619!1.90e-08!17;UBERON:0003076!9.34e-07!12;UBERON:0003057!9.34e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.02e-33,73;UBERON:0002346,3.46e-32,64;UBERON:0003075,3.46e-32,64;UBERON:0007284,3.46e-32,64;UBERON:0001016,5.69e-32,75;UBERON:0000073,3.25e-30,54;UBERON:0004121,5.35e-30,95;UBERON:0000924,5.35e-30,95;UBERON:0006601,5.35e-30,95;UBERON:0001049,1.77e-28,52;UBERON:0005068,1.77e-28,52;UBERON:0006241,1.77e-28,52;UBERON:0007135,1.77e-28,52;UBERON:0010371,4.94e-27,73;UBERON:0003056,2.08e-24,49;UBERON:0000955,7.28e-24,47;UBERON:0006238,7.28e-24,47;UBERON:0002616,4.35e-23,46;UBERON:0002020,2.50e-21,34;UBERON:0003080,3.51e-21,40;UBERON:0010314,7.44e-21,92;UBERON:0002780,2.36e-20,39;UBERON:0001890,2.36e-20,39;UBERON:0006240,2.36e-20,39;UBERON:0003528,5.51e-17,29;UBERON:0002791,5.51e-17,29;UBERON:0001893,5.51e-17,29;UBERON:0000956,3.00e-11,21;UBERON:0001869,3.00e-11,21;UBERON:0000203,3.00e-11,21;UBERON:0002619,1.98e-09,17;UBERON:0003076,1.02e-07,12;UBERON:0003057,1.02e-07,12;UBERON:0002420,4.16e-07,8;UBERON:0007245,4.16e-07,8;UBERON:0010009,4.16e-07,8;UBERON:0010011,4.16e-07,8;UBERON:0000454,4.16e-07,8;UBERON:0002021,5.41e-07,10;UBERON:0000411,5.41e-07,10;UBERON:0001950,5.41e-07,10
|phase1_expression=3.52327463630547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.52617609466313,1.5378032791413,2.13872888981712,0.55994568650145,0,0.167782606057736,0,0,0,0,0,23.4687094597133,21.1596391708813,21.5502677192101,0,0.889294796111139,0,0,0,1.79760066311043,3.84218305321555,5.49554945234932,6.21027316325777,4.6271491497304,52.5597811302999,39.977205912242,8.94182834269164,5.65488279007595,6.43453150627015,22.0231761998777,24.3882815742709,24.577045320999,18.9916254331479,20.5847198105422,18.7528813400434,25.1264699101243,15.757353080887,20.933359945423,50.0868595305235,47.1250263445031,28.519115211271,0.227178579999552,0.151143120213571,0,0,0,0.539703191637817,0,0,0.702222100658759,0,0,0,4.50698943285378,0,0,0,0,0,0,0.45673551887624,0,3.41416919849097,2.60227990149204,1.21786191324856,1.38369298353635,2.56228488939458,3.76283862834255,2.51333182659351,2.96633961281249,0.144599356919912,0,0.161766849947409,0,0,0,15.517382241612,15.4990563041957,0.255457055208591,0,0,0,24.4158742229861,10.980014467647,18.2198810563653,10.2556348913443,9.97290283588289,23.4800490352303,11.8436122039463,0.407357455401265,0,0.252722758433675,1.26265113531884,2.99277018814219,5.0578462975364,2.52086981727489,3.91832526372859,7.27990540919208,6.40568601424249,7.68354141389776,8.01980449290949,1.94011193639558,1.51284864134255,2.46331573829528,1.7535658594206,0.834141747676794,1.0447564995665,0.823128545631774,4.37875387000685,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0.590292695242212,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,13.4585567081041,10.496270462687,0,0,1.2797295032114,1.16118335930219,0.77320476793256,1.21010114774006,2.44615848229357,1.14135375667535,0,0.494096864172033,1.00534083520108,0.795825888164603,0.38992817423824,0.898819408654221,0.216138049874694,0,0.948339504765408,1.02823661348756,0,0.814605311381257,0.969762435838129,1.1221731182451,0.252946148497029,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32643988239339,0.651859905768103,0.339490171550376,0,0,0,0.195133647857799,0.630540576424764,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0,18.3027672586083,19.9259867206745,0,0.252470927204373,2.52406575533005,1.95219372148319,1.72338718186239,1.19484398976276,2.22798674082394,1.69845918473299,2.42886421004937,1.75353514746787,1.58115111178609,19.2792789853084,1.27746076687442,2.49291845134157,2.11753047159649,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,0.632073515871632,0,0,2.38307724027652,2.70091641046965,2.8458910432206,2.7863814554107,4.78818630834139,4.8159580752559,5.43011767986999,2.74018454203139,8.91752490642099,13.7690846061483,0.220528398054962,0,0,0.301564624640779,0,0,0,24.6615651673978,0,0.412773735926445,0,0,0,0,0.169978429993855,0.139951452323658,0,0,2.37251995185852,0.813277868507395,0.972048067396211,1.88179466413022,1.09181281873089,0.674321731924103,1.07449492442937,0,0,0,1.12738587736838,5.98066184175915,5.95650565645551,9.52810822885833,6.71631082084202,7.43406952159424,7.86293498926552,7.29144555126121,10.171356409294,5.55643477899814,2.01621004380506,0,0.608175645870493,0.616265742988964,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,2.44184548711471,0.538283139656854,2.51826924546118,0.19318959403219,0,0,0,0,9.60078132449013,10.1271552031579,9.16632821503035,10.1393377582776,8.22099023724771,9.82012066606611,10.1253375034771,8.55610286126019,9.5159905886683,11.9084871702919,2.07574695168353,4.78829848081237,3.24393850932855,2.43106717068294,3.35381060204772,6.06683577885047,1.33348036680969,3.7086310303001,3.20919209591815,3.53776096469316,3.29523089857312,3.01802146217722,4.49479235855436,3.39333307745807,3.9056118889817,2.85776214769844,3.36064545240081,5.01563973205633,3.29668720642645,2.35518272215036,2.40008476669791,3.37204031702741,2.14592570952589,3.48831399917588,2.72917203204459,3.9768865709088,3.10977553883713,3.15683653725411,3.53090695999241,1.68342681497322,3.55905054372522,4.62971067165148,3.6830793885272,1.54936841185966,2.70069255373598,10.7418548513317,3.50897412668113,2.57845264857958,1.91288332068843,1.10295709559758,1.39120701372253
|phase1_expression=3.52327463630547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.48677489619386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101376931219515,0,0,1.52617609466313,1.5378032791413,2.13872888981712,0.55994568650145,0,0.167782606057736,0,0,0,0,0,23.4687094597133,21.1596391708813,21.5502677192101,0,0.889294796111139,0,0,0,1.79760066311043,3.84218305321555,5.49554945234932,6.21027316325777,4.6271491497304,52.5597811302999,39.977205912242,8.94182834269164,5.65488279007595,6.43453150627015,22.0231761998777,24.3882815742709,24.577045320999,18.9916254331479,20.5847198105422,18.7528813400434,25.1264699101243,15.757353080887,20.933359945423,50.0868595305235,47.1250263445031,28.519115211271,0.227178579999552,0.151143120213571,0,0,0,0.539703191637817,0,0,0.702222100658759,0,0,0,4.50698943285378,0,0,0,0,0,0,0.45673551887624,0,3.41416919849097,2.60227990149204,1.21786191324856,1.38369298353635,2.56228488939458,3.76283862834255,2.51333182659351,2.96633961281249,0.144599356919912,0,0.161766849947409,0,0,0,15.517382241612,15.4990563041957,0.255457055208591,0,0,0,24.4158742229861,10.980014467647,18.2198810563653,10.2556348913443,9.97290283588289,23.4800490352303,11.8436122039463,0.407357455401265,0,0.252722758433675,1.26265113531884,2.99277018814219,5.0578462975364,2.52086981727489,3.91832526372859,7.27990540919208,6.40568601424249,7.68354141389776,8.01980449290949,1.94011193639558,1.51284864134255,2.46331573829528,1.7535658594206,0.834141747676794,1.0447564995665,0.823128545631774,4.37875387000685,0,0,0,0.207125772535502,0.234526059981096,0,0.473489471170421,0.590292695242212,0,0,0,0.116765342367169,0.16455984991348,0,0,0,0,0,13.4585567081041,10.496270462687,0,0,1.2797295032114,1.16118335930219,0.77320476793256,1.21010114774006,2.44615848229357,1.14135375667535,0,0.494096864172033,1.00534083520108,0.795825888164603,0.38992817423824,0.898819408654221,0.216138049874694,0,0.948339504765408,1.02823661348756,0,0.814605311381257,0.969762435838129,1.1221731182451,0.252946148497029,0,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.32643988239339,0.651859905768103,0.339490171550376,0,0,0,0.195133647857799,0.630540576424764,0.221464689648775,0.159454768657487,0.163863314715738,0,0,0,0,0,0,18.3027672586083,19.9259867206745,0,0.252470927204373,2.52406575533005,1.95219372148319,1.72338718186239,1.19484398976276,2.22798674082394,1.69845918473299,2.42886421004937,1.75353514746787,1.58115111178609,19.2792789853084,1.27746076687442,2.49291845134157,2.11753047159649,0.164970122972535,0,0.242780636154981,0.302323556964751,0.188605079755898,0.295301892880773,0.614870295887855,0.516856586336442,0.363533729477506,0.356497378384721,0.632073515871632,0,0,2.38307724027652,2.70091641046965,2.8458910432206,2.7863814554107,4.78818630834139,4.8159580752559,5.43011767986999,2.74018454203139,8.91752490642099,13.7690846061483,0.220528398054962,0,0,0.301564624640779,0,0,0,24.6615651673978,0,0.412773735926445,0,0,0,0,0.169978429993855,0.139951452323658,0,0,2.37251995185852,0.813277868507395,0.972048067396211,1.88179466413022,1.09181281873089,0.674321731924103,1.07449492442937,0,0,0,1.12738587736838,5.98066184175915,5.95650565645551,9.52810822885833,6.71631082084202,7.43406952159424,7.86293498926552,7.29144555126121,10.171356409294,5.55643477899814,2.01621004380506,0,0.608175645870493,0.616265742988964,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,2.44184548711471,0.538283139656854,2.51826924546118,0.19318959403219,0,0,0,0,9.60078132449013,10.1271552031579,9.16632821503035,10.1393377582776,8.22099023724771,9.82012066606611,10.1253375034771,8.55610286126019,9.5159905886683,11.9084871702919,2.07574695168353,4.78829848081237,3.24393850932855,2.43106717068294,3.35381060204772,6.06683577885047,1.33348036680969,3.7086310303001,3.20919209591815,3.53776096469316,3.29523089857312,3.01802146217722,4.49479235855436,3.39333307745807,3.9056118889817,2.85776214769844,3.36064545240081,5.01563973205633,3.29668720642645,2.35518272215036,2.40008476669791,3.37204031702741,2.14592570952589,3.48831399917588,2.72917203204459,3.9768865709088,3.10977553883713,3.15683653725411,3.53090695999241,1.68342681497322,3.55905054372522,4.62971067165148,3.6830793885272,1.54936841185966,2.70069255373598,10.7418548513317,3.50897412668113,2.57845264857958,1.91288332068843,1.10295709559758,1.39120701372253
|short_description=p1@Caskin1
}}
}}

Latest revision as of 01:33, 26 September 2015

Short description:p1@Caskin1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Caskin1_5end
Coexpression cluster:MCL_coexpression_mm9:159
Association with transcript: -116bp_to_ENSMUST00000024958, ENSMUST00000088474, ENSMUST00000115347, NM_027937, uc008awm.1, uc008awo.1, uc008awp.2, uc012amk.1_5end
EntrezGene:Caskin1
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Caskin1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G73.52
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A33.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.10
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.53
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.54
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C32.14
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.56
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C323.47
Mouse Granule cells, donor2.CNhs12357.11731-123E321.16
Mouse Granule cells, donor3.CNhs12108.11636-122C721.55
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.89
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C81.80
Mouse Microglia, donor2.CNhs12634.11736-123E83.84
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.50
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F56.21
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D94.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F152.56
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D539.98
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D28.94
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.65
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D322.02
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F324.39
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D724.58
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D418.99
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F420.58
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D818.75
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E425.13
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I620.93
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D650.09
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F647.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E128.52
Mouse Schwann, donor1.CNhs12507.11728-123D90.23
Mouse Schwann, donor2.CNhs12573.11746-123F90.15
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.70
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G64.51
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D73.41
adrenal gland, embryo E14.CNhs11038.406-44C52.60
adrenal gland, embryo E16.CNhs11004.1254-43D61.22
adrenal gland, embryo E17.CNhs11043.1263-45I11.38
adrenal gland, embryo E18.CNhs11026.1262-18F52.56
adrenal gland, neonate N00.CNhs11191.1311-23C13.76
adrenal gland, neonate N25.CNhs11223.1377-27I32.51
amnion, adult pregnant day17.5.CNhs10488.583-22A82.97
aorta, adult.CNhs10498.46-23H10.14
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B215.52
cerebellum, neonate N30.CNhs11135.1395-42I215.50
colon, adult.CNhs10468.36-18H70.26
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A424.42
corpus striatum, adult.CNhs10487.19-21D810.98
corpus striatum, neonate N00.CNhs11226.630-43F118.22
cortex, adult.CNhs10473.12-14D510.26
cortex, neonate N30.CNhs11107.1392-42F29.97
diencephalon, adult.CNhs10482.20-12F223.48
diencephalon, neonate N30.CNhs11201.1388-42B211.84
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.25
eyeball, adult.CNhs10484.31-12G41.26
eyeball, embryo E12.CNhs11016.345-16C62.99
eyeball, embryo E14.CNhs10521.399-16E25.06
eyeball, embryo E15.CNhs10593.426-16C92.52
eyeball, embryo E17.CNhs11023.1261-18D43.92
eyeball, neonate N00.CNhs11207.633-15C67.28
eyeball, neonate N01.CNhs11140.1532-43E76.41
eyeball, neonate N02.CNhs11205.1551-44G87.68
eyeball, neonate N16.CNhs11188.777-19A28.02
forelimb, embryo E11.CNhs10596.335-25E21.94
forelimb, embryo E12.CNhs10600.359-14H21.51
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A81.75
forelimb, embryo E15.CNhs11007.437-20E70.83
forelimb, embryo E17.CNhs10598.1517-43C41.04
forelimb, embryo E18.CNhs11008.1520-43B50.82
gonad, embryo E13.CNhs11044.1564-45I64.38
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.21
heart, embryo E12.CNhs11015.353-12F50.23
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.59
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.12
heart, neonate N03.CNhs11221.1349-25I20.16
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E813.46
hippocampus, neonate N00.CNhs11228.627-43G110.50
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I51.28
intestine, embryo E13.CNhs11010.381-16D51.16
intestine, embryo E15.CNhs10602.976-16D80.77
intestine, embryo E16.CNhs10585.463-22H41.21
intestine, embryo E17.CNhs10582.482-18D32.45
intestine, embryo E18.CNhs10526.1289-20F71.14
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.49
intestine, neonate N06.CNhs11102.688-20B81.01
intestine, neonate N07.CNhs11095.720-20F20.80
intestine, neonate N10.CNhs11098.755-23A50.39
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.22
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.95
kidney, embryo E15.CNhs10997.434-16F81.03
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.97
kidney, neonate N00.CNhs11214.646-21G71.12
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.12
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G21.33
lung, embryo E14.CNhs10604.404-26F80.65
lung, embryo E15.CNhs11020.432-17C50.34
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.63
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.16
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.00
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C218.30
medulla oblongata, neonate N30.CNhs11200.1396-42A319.93
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E12.52
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E21.95
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.72
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D71.19
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D82.23
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D91.70
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D42.43
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I919.28
ovary, adult.CNhs10507.91-2I71.28
ovary, embryo E18.CNhs11040.505-44H72.49
ovary, neonate N00.CNhs11217.1299-22I42.12
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.30
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.36
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.63
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G82.38
pituitary gland, embryo E12.CNhs11018.346-16E62.70
pituitary gland, embryo E13.CNhs11009.370-44C72.85
pituitary gland, embryo E14.CNhs11037.398-44A52.79
pituitary gland, embryo E15.CNhs10592.427-16B94.79
pituitary gland, embryo E16.CNhs11036.449-43F64.82
pituitary gland, embryo E17.CNhs11039.1265-44F55.43
pituitary gland, neonate N00.CNhs11190.1308-22E92.74
placenta, adult pregnant day10.CNhs10472.539-13I78.92
placenta, adult pregnant day17.CNhs10464.577-18G313.77
prostate, adult.CNhs10470.859-1F80.22
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.30
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C924.66
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.41
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E32.37
stomach, embryo E15.CNhs10603.1252-16G80.81
stomach, embryo E16.CNhs11022.459-17D40.97
stomach, embryo E17.CNhs11006.1035-18D51.88
stomach, embryo E18.CNhs10999.1286-20C61.09
stomach, neonate N03.CNhs11193.1340-24B80.67
stomach, neonate N07.CNhs11210.718-18A91.07
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G51.13
testis, embryo E13.CNhs11031.389-23F55.98
testis, embryo E15.CNhs11034.443-27C55.96
testis, embryo E16.CNhs11033.470-26G59.53
testis, embryo E17.CNhs11029.486-18I56.72
testis, embryo E18.CNhs11027.503-18G57.43
testis, neonate N00.CNhs11189.1300-22B77.86
testis, neonate N07.CNhs11222.726-26I47.29
testis, neonate N10.CNhs11204.763-44D910.17
testis, neonate N20.CNhs11110.839-18H35.56
testis, neonate N30.CNhs11130.1391-42E22.02
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.62
thymus, embryo E16.CNhs11002.456-26C50.00
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.15
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H32.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.54
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G52.52
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A19.60
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A210.13
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A39.17
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D710.14
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A48.22
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A59.82
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A610.13
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A78.56
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A89.52
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A911.91
whole body, embryo E11.CNhs11014.324-5I82.08
whole body, embryo E12.CNhs10587.857-27C94.79
whole body, embryo E13.CNhs10512.372-23H23.24
whole body, embryo E14.5.CNhs10578.420-27D22.43
whole body, embryo E14.CNhs10519.395-14B13.35
whole body, embryo E16.CNhs10514.453-14F26.07
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.33
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G53.71
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G53.21
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G53.54
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G53.02
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G54.49
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G53.39
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G53.91
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.86
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G53.36
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G55.02
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G53.30
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G52.36
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G52.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G53.37
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G52.15
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G53.49
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G52.73
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G53.98
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G53.11
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G53.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G53.53
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G51.68
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G53.56
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G54.63
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G53.68
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G51.55
whole body, embryo E17.5.CNhs10513.490-9F92.70
whole body, embryo E17.CNhs10517.475-3I510.74
whole body, embryo E18.CNhs10516.493-3B33.51
whole body, neonate N00.CNhs10525.657-19C22.58
whole body, neonate N01.CNhs10576.659-23C61.91
whole body, neonate N06.CNhs10515.692-21D11.10
whole body, neonate N10.CNhs10518.761-6B41.39





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.10e-1723
neuroblast (sensu Vertebrata)4.10e-1723
neuron1.24e-1633
neuronal stem cell1.24e-1633
neuroblast1.24e-1633
electrically signaling cell1.24e-1633
ectodermal cell1.82e-1344
neurectodermal cell1.82e-1344
neural cell4.41e-1343
electrically responsive cell6.61e-1239
electrically active cell6.61e-1239

Uber anatomy
Ontology termp-valuen
central nervous system1.02e-3373
neurectoderm3.46e-3264
neural plate3.46e-3264
presumptive neural plate3.46e-3264
nervous system5.69e-3275
regional part of nervous system3.25e-3054
ectoderm-derived structure5.35e-3095
ectoderm5.35e-3095
presumptive ectoderm5.35e-3095
neural tube1.77e-2852
neural rod1.77e-2852
future spinal cord1.77e-2852
neural keel1.77e-2852
ecto-epithelium4.94e-2773
pre-chordal neural plate2.08e-2449
brain7.28e-2447
future brain7.28e-2447
regional part of brain4.35e-2346
gray matter2.50e-2134
anterior neural tube3.51e-2140
structure with developmental contribution from neural crest7.44e-2192
regional part of forebrain2.36e-2039
forebrain2.36e-2039
future forebrain2.36e-2039
brain grey matter5.51e-1729
regional part of telencephalon5.51e-1729
telencephalon5.51e-1729
cerebral cortex3.00e-1121
cerebral hemisphere3.00e-1121
pallium3.00e-1121
regional part of cerebral cortex1.98e-0917
posterior neural tube1.02e-0712
chordal neural plate1.02e-0712
basal ganglion4.16e-078
nuclear complex of neuraxis4.16e-078
aggregate regional part of brain4.16e-078
collection of basal ganglia4.16e-078
cerebral subcortex4.16e-078
occipital lobe5.41e-0710
visual cortex5.41e-0710
neocortex5.41e-0710
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