Personal tools

FFCP PHASE1:Mm9::chr4:101169281..101169327,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=72685
|EntrezGene=72685
|HGNC=
|HGNC=
|MCL_coexpression_id=803
|TSSclassifier=NA
|UniProt=B1B0B7
|UniProt=B1B0B7
|association_with_transcript=0bp_to_ENSMUST00000154120_5end
|association_with_transcript=0bp_to_ENSMUST00000154120_5end
|cluster_id=chr4:101169281..101169327,+
|description=CAGE_peak_5_at_Dnajc6_5end
|description=CAGE_peak_5_at_Dnajc6_5end
|id=chr4:101169281..101169327,+
|id=chr4:101169281..101169327,+
|ontology_enrichment_celltype=CL:0000117!7.85e-07!23;CL:0000337!7.85e-07!23
|ontology_enrichment_celltype=CL:0000117!7.85e-07!23;CL:0000337!7.85e-07!23
|ontology_enrichment_celltype_v019_2=CL:0000117,4.38e-13,23;CL:0000337,4.38e-13,23;CL:0000540,8.60e-08,33;CL:0000047,8.60e-08,33;CL:0000031,8.60e-08,33;CL:0000404,8.60e-08,33
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0004121!2.06e-15!102;UBERON:0000924!2.06e-15!102;UBERON:0006601!2.06e-15!102;UBERON:0007811!3.37e-14!86;UBERON:0000033!7.25e-14!63;UBERON:0000153!1.78e-13!94;UBERON:0002346!8.49e-13!71;UBERON:0003075!8.49e-13!71;UBERON:0007284!8.49e-13!71;UBERON:0001049!1.42e-12!52;UBERON:0005068!1.42e-12!52;UBERON:0006241!1.42e-12!52;UBERON:0007135!1.42e-12!52;UBERON:0000955!2.01e-11!50;UBERON:0006238!2.01e-11!50;UBERON:0002616!7.52e-11!49;UBERON:0002020!9.62e-11!34;UBERON:0001017!3.58e-10!73;UBERON:0005743!3.58e-10!73;UBERON:0000073!5.05e-10!75;UBERON:0001016!5.05e-10!75;UBERON:0003056!8.16e-10!49;UBERON:0003080!1.87e-08!40;UBERON:0002780!5.85e-08!39;UBERON:0001890!5.85e-08!39;UBERON:0006240!5.85e-08!39;UBERON:0002791!8.72e-08!29;UBERON:0003528!8.72e-08!29;UBERON:0001893!8.72e-08!29;UBERON:0002021!9.87e-08!10;UBERON:0000411!9.87e-08!10;UBERON:0001950!9.87e-08!10
|ontology_enrichment_uberon_v019_2=UBERON:0000073,1.69e-28,54;UBERON:0001049,7.46e-26,52;UBERON:0005068,7.46e-26,52;UBERON:0006241,7.46e-26,52;UBERON:0007135,7.46e-26,52;UBERON:0001017,4.37e-25,73;UBERON:0001016,4.27e-24,75;UBERON:0004121,5.94e-24,95;UBERON:0000924,5.94e-24,95;UBERON:0006601,5.94e-24,95;UBERON:0002020,1.10e-22,34;UBERON:0010371,4.07e-22,73;UBERON:0000955,6.60e-20,47;UBERON:0006238,6.60e-20,47;UBERON:0002346,4.49e-19,64;UBERON:0003075,4.49e-19,64;UBERON:0007284,4.49e-19,64;UBERON:0002616,9.48e-19,46;UBERON:0003528,2.37e-16,29;UBERON:0002791,2.37e-16,29;UBERON:0001893,2.37e-16,29;UBERON:0003080,5.43e-16,40;UBERON:0002780,5.75e-15,39;UBERON:0001890,5.75e-15,39;UBERON:0006240,5.75e-15,39;UBERON:0002021,2.64e-14,10;UBERON:0000411,2.64e-14,10;UBERON:0001950,2.64e-14,10;UBERON:0010314,5.43e-12,92;UBERON:0003056,9.37e-12,49;UBERON:0003076,4.61e-11,12;UBERON:0003057,4.61e-11,12;UBERON:0002619,6.49e-11,17;UBERON:0000956,6.14e-10,21;UBERON:0001869,6.14e-10,21;UBERON:0000203,6.14e-10,21;UBERON:0002240,1.96e-09,6;UBERON:0005174,1.96e-09,6;UBERON:0001137,1.96e-09,6;UBERON:0004111,4.73e-09,122;UBERON:0000025,4.79e-09,114;UBERON:0001948,2.29e-08,5;UBERON:0002315,2.29e-08,5;UBERON:0002420,4.49e-08,8;UBERON:0007245,4.49e-08,8;UBERON:0010009,4.49e-08,8;UBERON:0010011,4.49e-08,8;UBERON:0000454,4.49e-08,8;UBERON:0000483,4.78e-08,174;UBERON:0000119,8.16e-08,176;UBERON:0011216,1.44e-07,194;UBERON:0007023,1.79e-07,51;UBERON:0002950,5.08e-07,4;UBERON:0001891,5.08e-07,4;UBERON:0009616,5.08e-07,4;UBERON:0010286,5.08e-07,4
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,0,0,0,8.56952953211411,9.718215801871,0.367472397644862,0.0958454710182364,0,8.8092704799511,7.40586560894089,6.75868746327471,1.58263545276233,1.64677758484337,0.52091337055676,6.97957497503452,15.757353080887,11.1542720877071,11.7851434189467,12.1015928679237,2.79599168737951,0.151452386666368,0.226714680320357,0,0,0.679971333707751,0.539703191637817,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,7.11066703153331,0,0,0,0.45673551887624,11.6522047641227,1.92974780784272,0,0.913396434936424,0.230615497256059,0.150722640552623,0.23517741427141,0.376999773989026,0,0.433798070759735,0,0.161766849947409,0,0,0,2.04946557908083,3.56059401582874,0.510914110417183,0,0,0.127070227073065,6.74057877321702,5.03250663100489,1.38219787324151,11.6462294528825,6.39288643325826,6.64921742590592,7.62533936418461,0.101839363850316,0.248813941220186,3.0326731012041,0.420883711772948,0.390361328888111,0.459804208866946,0.540186389416048,0.30140963567143,0.680364991513279,0.640568601424249,0.655912071918102,0.517406741478031,0,0,0.351902248327898,0,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,19.767255165028,2.26390147234426,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0.380451252225118,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.280543279561274,0.252946148497029,0.147610147979602,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,1.3109065177259,1.20879487306127,1.15719246865209,0,0,29.5058563811422,9.3818493743609,6.90367536947505,4.45404409050372,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,8.35435422696698,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,5.44703369206061,0,0.129358683782755,0.214337035031592,0,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0.441056796109924,0.8244312647074,0.645857706783622,1.80938774784468,1.43246812803764,1.96969079694074,0,4.26478194624172,1.02522528478712,0,0,0,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0.216010681643603,0,0.218362563746178,0.269728692769641,0.330613822901344,0.26175594198403,0.259229946583586,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0.2604087696879,0,0,0.576060012515731,0.948033361884535,2.43270258348197,1.74608627180206,1.16928740680016,1.25318686967237,0.39736270956253,0.600977247599844,1.18151621739662,0.403865799792591,0.762068066549998,0.504130925684203,0.974578807397524,0.769694733122636,0.233753804363138,1.81384306892169,0.443971906748129,0.0897138566094757,0,0.965947970160952,0,0,0.428736758158132,1.00314420807073,11.2950368523413,6.90487854760765,12.0308057822273,6.8741272937475,6.16574267793578,3.7769694869485,6.07520250208625,7.65546045481175,10.8754178156209,6.73088405277366,0,0,0.682934423016537,0.729320151204882,0.419226325255965,0.367687016900028,1.11123363900808,0.824140228955577,0.962757628775446,0.758091635291392,0.50695859978048,0.377252682772152,0.655490552289177,0.960377286073039,0.574354689556133,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.532427418478012,0.238436189947321,1.16277133305863,0.941093804153306,1.01537529470012,0.365855945745545,0.789209134313529,1.35804113845862,0.561142271657738,0.711810108745045,0.788035859004508,0.818462086339379,0.77468420592983,0.964533054905707,0.749431733813838,0.935726433781634,1.71896843238639,0.765153328275374,0.441182838239031,0.695603506861264
|phase1_expression=0.320297694209588,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0,0.765389611359628,0,0.261199789138935,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.01158230429799,2.11596391708813,1.90149421051854,0,0,0,0,0,0,0,0,0,0,8.56952953211411,9.718215801871,0.367472397644862,0.0958454710182364,0,8.8092704799511,7.40586560894089,6.75868746327471,1.58263545276233,1.64677758484337,0.52091337055676,6.97957497503452,15.757353080887,11.1542720877071,11.7851434189467,12.1015928679237,2.79599168737951,0.151452386666368,0.226714680320357,0,0,0.679971333707751,0.539703191637817,0,0,0.280888840263504,0,0,0,0.704217098883403,0,0,7.11066703153331,0,0,0,0.45673551887624,11.6522047641227,1.92974780784272,0,0.913396434936424,0.230615497256059,0.150722640552623,0.23517741427141,0.376999773989026,0,0.433798070759735,0,0.161766849947409,0,0,0,2.04946557908083,3.56059401582874,0.510914110417183,0,0,0.127070227073065,6.74057877321702,5.03250663100489,1.38219787324151,11.6462294528825,6.39288643325826,6.64921742590592,7.62533936418461,0.101839363850316,0.248813941220186,3.0326731012041,0.420883711772948,0.390361328888111,0.459804208866946,0.540186389416048,0.30140963567143,0.680364991513279,0.640568601424249,0.655912071918102,0.517406741478031,0,0,0.351902248327898,0,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0810688095458557,0,0,0,19.767255165028,2.26390147234426,0,0.264450566663544,0.213288250535234,0.232236671860439,0.257734922644187,0,0,0.380451252225118,0,0,0,0.397912944082302,0.19496408711912,0,0,0,0,0.114248512609729,0,0,0,0.280543279561274,0.252946148497029,0.147610147979602,0.31399745568275,0.370191491765402,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.923765950833023,0,0,0,0,0,0,0.195133647857799,0.315270288212382,0.44292937929755,0.318909537314974,1.3109065177259,1.20879487306127,1.15719246865209,0,0,29.5058563811422,9.3818493743609,6.90367536947505,4.45404409050372,0,0.252470927204373,0,0,0.215423397732799,0,0,0,0,0.292255857911312,0,8.35435422696698,0.283880170416537,0.178065603667255,0,0.329940245945071,0,0.242780636154981,0,0.188605079755898,0.295301892880773,0.307435147943927,0.258428293168221,0.727067458955011,0.356497378384721,0,0,0,5.44703369206061,0,0.129358683782755,0.214337035031592,0,0.535106452806212,0.329098041204242,0.304464949114599,0,0,0.441056796109924,0.8244312647074,0.645857706783622,1.80938774784468,1.43246812803764,1.96969079694074,0,4.26478194624172,1.02522528478712,0,0,0,0.27338845544205,0.228778173206523,0.169978429993855,0.139951452323658,0.138199973804424,0,0,0,0.216010681643603,0,0.218362563746178,0.269728692769641,0.330613822901344,0.26175594198403,0.259229946583586,0.621339313086926,0,0.149516546043979,0,0.194451188344048,0.129159823477731,0,0.234714477291508,0.2604087696879,0,0,0.576060012515731,0.948033361884535,2.43270258348197,1.74608627180206,1.16928740680016,1.25318686967237,0.39736270956253,0.600977247599844,1.18151621739662,0.403865799792591,0.762068066549998,0.504130925684203,0.974578807397524,0.769694733122636,0.233753804363138,1.81384306892169,0.443971906748129,0.0897138566094757,0,0.965947970160952,0,0,0.428736758158132,1.00314420807073,11.2950368523413,6.90487854760765,12.0308057822273,6.8741272937475,6.16574267793578,3.7769694869485,6.07520250208625,7.65546045481175,10.8754178156209,6.73088405277366,0,0,0.682934423016537,0.729320151204882,0.419226325255965,0.367687016900028,1.11123363900808,0.824140228955577,0.962757628775446,0.758091635291392,0.50695859978048,0.377252682772152,0.655490552289177,0.960377286073039,0.574354689556133,0.476293691283074,0.579421629724277,0.38581844092741,0.412085900803307,0.441596760403192,0.685738504770831,0.532427418478012,0.238436189947321,1.16277133305863,0.941093804153306,1.01537529470012,0.365855945745545,0.789209134313529,1.35804113845862,0.561142271657738,0.711810108745045,0.788035859004508,0.818462086339379,0.77468420592983,0.964533054905707,0.749431733813838,0.935726433781634,1.71896843238639,0.765153328275374,0.441182838239031,0.695603506861264
|short_description=p5@Dnajc6
|short_description=p5@Dnajc6
}}
}}

Latest revision as of 01:38, 26 September 2015

Short description:p5@Dnajc6
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_5_at_Dnajc6_5end
Coexpression cluster:MCL_coexpression_mm9:803
Association with transcript: 0bp_to_ENSMUST00000154120_5end
EntrezGene:Dnajc6
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p5@Dnajc6

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.32
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.23
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.77
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.26
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.16
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.00
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C31.01
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.90
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D50.00
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.00
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.00
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F18.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.72
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D20.37
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F20.10
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D60.00
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F37.41
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D76.76
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.58
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.65
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D80.52
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E46.98
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E515.76
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I611.15
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.79
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F612.10
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D90.15
Mouse Schwann, donor2.CNhs12573.11746-123F90.23
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.68
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.28
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.70
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B67.11
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.46
accessory axillary lymph node, adult.CNhs10475.1063-29H911.65
adrenal gland, adult.CNhs10508.49-24D71.93
adrenal gland, embryo E14.CNhs11038.406-44C50.00
adrenal gland, embryo E16.CNhs11004.1254-43D60.91
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.15
adrenal gland, neonate N00.CNhs11191.1311-23C10.24
adrenal gland, neonate N25.CNhs11223.1377-27I30.38
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.43
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.16
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B22.05
cerebellum, neonate N30.CNhs11135.1395-42I23.56
colon, adult.CNhs10468.36-18H70.51
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.13
corpora quadrigemina, adult.CNhs10501.16-22A46.74
corpus striatum, adult.CNhs10487.19-21D85.03
corpus striatum, neonate N00.CNhs11226.630-43F11.38
cortex, adult.CNhs10473.12-14D511.65
cortex, neonate N30.CNhs11107.1392-42F26.39
diencephalon, adult.CNhs10482.20-12F26.65
diencephalon, neonate N30.CNhs11201.1388-42B27.63
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.10
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.25
epididymis, adult.CNhs10490.58-23B23.03
eyeball, adult.CNhs10484.31-12G40.42
eyeball, embryo E12.CNhs11016.345-16C60.39
eyeball, embryo E14.CNhs10521.399-16E20.46
eyeball, embryo E15.CNhs10593.426-16C90.54
eyeball, embryo E17.CNhs11023.1261-18D40.30
eyeball, neonate N00.CNhs11207.633-15C60.68
eyeball, neonate N01.CNhs11140.1532-43E70.64
eyeball, neonate N02.CNhs11205.1551-44G80.66
eyeball, neonate N16.CNhs11188.777-19A20.52
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H20.00
forelimb, embryo E13.CNhs10589.384-1E20.35
forelimb, embryo E14.CNhs10577.413-26A80.00
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.35
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F50.00
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.00
heart, embryo E15.CNhs11017.431-16C80.00
heart, embryo E16.CNhs11021.457-17C60.00
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E30.00
heart, neonate N03.CNhs11221.1349-25I20.00
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.08
heart, neonate N20.CNhs11127.821-26I60.00
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E819.77
hippocampus, neonate N00.CNhs11228.627-43G12.26
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.26
intestine, embryo E12.CNhs11019.1251-16I50.21
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.26
intestine, embryo E16.CNhs10585.463-22H40.00
intestine, embryo E17.CNhs10582.482-18D30.00
intestine, embryo E18.CNhs10526.1289-20F70.38
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.00
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.19
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.00
kidney, embryo E15.CNhs10997.434-16F80.11
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.00
kidney, embryo E18.CNhs11001.1288-20C70.00
kidney, neonate N00.CNhs11214.646-21G70.28
kidney, neonate N10.CNhs11206.758-6D50.25
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.31
kidney, neonate N30.CNhs11203.1385-42H10.37
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.92
lung, embryo E12.CNhs10522.354-16G20.00
lung, embryo E14.CNhs10604.404-26F80.00
lung, embryo E15.CNhs11020.432-17C50.00
lung, embryo E16.CNhs10998.458-17B60.00
lung, embryo E17.CNhs10605.480-44A60.00
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.32
lung, neonate N07.CNhs11111.715-19A30.44
lung, neonate N10.CNhs11219.750-23E60.32
lung, neonate N20.CNhs11109.822-18A41.31
lung, neonate N25.CNhs11119.1359-25C71.21
lung, neonate N30.CNhs11133.1394-42H21.16
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B629.51
mammary gland, adult pregnant day19.CNhs10476.588-5H29.38
medulla oblongata, adult.CNhs10477.17-12C26.90
medulla oblongata, neonate N30.CNhs11200.1396-42A34.45
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.25
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E30.22
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.00
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.00
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.00
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.29
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.00
olfactory brain, adult.CNhs10489.18-22I98.35
ovary, adult.CNhs10507.91-2I70.28
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.00
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.19
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.26
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.36
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G85.45
pituitary gland, embryo E12.CNhs11018.346-16E60.00
pituitary gland, embryo E13.CNhs11009.370-44C70.13
pituitary gland, embryo E14.CNhs11037.398-44A50.21
pituitary gland, embryo E15.CNhs10592.427-16B90.00
pituitary gland, embryo E16.CNhs11036.449-43F60.54
pituitary gland, embryo E17.CNhs11039.1265-44F50.33
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.44
skin, adult.CNhs10492.30-1C30.82
skin, neonate N00.CNhs11124.650-25G40.65
skin, neonate N03.CNhs11215.662-22H31.81
skin, neonate N06.CNhs11097.693-20I51.43
skin, neonate N10.CNhs11108.762-6C41.97
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C94.26
spleen, adult.CNhs10465.25-2G21.03
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.27
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.14
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.00
stomach, embryo E15.CNhs10603.1252-16G80.00
stomach, embryo E16.CNhs11022.459-17D40.22
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.22
stomach, neonate N03.CNhs11193.1340-24B80.27
stomach, neonate N07.CNhs11210.718-18A90.33
stomach, neonate N25.CNhs11104.1355-25E40.26
stomach, neonate N30.CNhs11134.1386-42I10.26
submandibular gland, adult.CNhs10469.59-29C10.62
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.00
testis, embryo E16.CNhs11033.470-26G50.19
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.00
testis, neonate N00.CNhs11189.1300-22B70.23
testis, neonate N07.CNhs11222.726-26I40.26
testis, neonate N10.CNhs11204.763-44D90.00
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.58
thymus, adult.CNhs10471.38-12B50.95
thymus, embryo E14.CNhs11041.402-44I42.43
thymus, embryo E15.CNhs11005.430-45I21.75
thymus, embryo E16.CNhs11002.456-26C51.17
thymus, embryo E17.CNhs10581.478-18C11.25
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.60
thymus, neonate N03.CNhs11137.2104-43C71.18
thymus, neonate N06.CNhs11197.681-26C40.40
thymus, neonate N07.CNhs11211.713-19D30.76
thymus, neonate N10.CNhs11194.748-24E40.50
thymus, neonate N20.CNhs11186.820-7A20.97
thymus, neonate N25.CNhs11125.1362-25G70.77
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B41.81
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.44
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.97
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.43
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A111.30
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A26.90
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A312.03
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D76.87
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A46.17
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A53.78
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A66.08
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A77.66
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A810.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A96.73
whole body, embryo E11.CNhs11014.324-5I80.00
whole body, embryo E12.CNhs10587.857-27C90.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.73
whole body, embryo E14.CNhs10519.395-14B10.42
whole body, embryo E16.CNhs10514.453-14F20.37
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G51.11
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.38
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.66
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.96
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.57
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.48
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.24
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.16
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.94
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.02
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.37
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G51.36
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.71
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.79
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.82
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F90.96
whole body, embryo E17.CNhs10517.475-3I50.75
whole body, embryo E18.CNhs10516.493-3B30.94
whole body, neonate N00.CNhs10525.657-19C21.72
whole body, neonate N01.CNhs10576.659-23C60.77
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.70





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
CNS neuron (sensu Vertebrata)4.38e-1323
neuroblast (sensu Vertebrata)4.38e-1323
neuron8.60e-0833
neuronal stem cell8.60e-0833
neuroblast8.60e-0833
electrically signaling cell8.60e-0833

Uber anatomy
Ontology termp-valuen
regional part of nervous system1.69e-2854
neural tube7.46e-2652
neural rod7.46e-2652
future spinal cord7.46e-2652
neural keel7.46e-2652
central nervous system4.37e-2573
nervous system4.27e-2475
ectoderm-derived structure5.94e-2495
ectoderm5.94e-2495
presumptive ectoderm5.94e-2495
gray matter1.10e-2234
ecto-epithelium4.07e-2273
brain6.60e-2047
future brain6.60e-2047
neurectoderm4.49e-1964
neural plate4.49e-1964
presumptive neural plate4.49e-1964
regional part of brain9.48e-1946
brain grey matter2.37e-1629
regional part of telencephalon2.37e-1629
telencephalon2.37e-1629
anterior neural tube5.43e-1640
regional part of forebrain5.75e-1539
forebrain5.75e-1539
future forebrain5.75e-1539
occipital lobe2.64e-1410
visual cortex2.64e-1410
neocortex2.64e-1410
structure with developmental contribution from neural crest5.43e-1292
pre-chordal neural plate9.37e-1249
posterior neural tube4.61e-1112
chordal neural plate4.61e-1112
regional part of cerebral cortex6.49e-1117
cerebral cortex6.14e-1021
cerebral hemisphere6.14e-1021
pallium6.14e-1021
spinal cord1.96e-096
dorsal region element1.96e-096
dorsum1.96e-096
anatomical conduit4.73e-09122
tube4.79e-09114
regional part of spinal cord2.29e-085
gray matter of spinal cord2.29e-085
basal ganglion4.49e-088
nuclear complex of neuraxis4.49e-088
aggregate regional part of brain4.49e-088
collection of basal ganglia4.49e-088
cerebral subcortex4.49e-088
epithelium4.78e-08174
cell layer8.16e-08176
organ system subdivision1.44e-07194
adult organism1.79e-0751
regional part of midbrain5.08e-074
midbrain5.08e-074
presumptive midbrain5.08e-074
midbrain neural tube5.08e-074
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr4:101169281..101169327,%2B&oldid=4225853"