FFCP PHASE1:Mm9::chr10:52101727..52101746,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=94221 | |EntrezGene=94221 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1026 | |||
|TSSclassifier=NA | |||
|UniProt=Q8BH60 | |UniProt=Q8BH60 | ||
|association_with_transcript=134bp_to_ENSMUST00000020008,ENSMUST00000105475_5end | |association_with_transcript=134bp_to_ENSMUST00000020008,ENSMUST00000105475_5end | ||
|cluster_id=chr10:52101727..52101746,- | |||
|description=CAGE_peak_2_at_Gopc_5end | |description=CAGE_peak_2_at_Gopc_5end | ||
|id=chr10:52101727..52101746,- | |id=chr10:52101727..52101746,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002346!3.45e-09!71;UBERON:0003075!3.45e-09!71;UBERON:0007284!3.45e-09!71;UBERON:0001017!1.29e-08!73;UBERON:0005743!1.29e-08!73;UBERON:0002020!1.48e-08!34;UBERON:0000073!9.26e-08!75;UBERON:0001016!9.26e-08!75;UBERON:0001049!3.02e-07!52;UBERON:0005068!3.02e-07!52;UBERON:0006241!3.02e-07!52;UBERON:0007135!3.02e-07!52;UBERON:0003056!3.26e-07!49;UBERON:0002021!4.82e-07!10;UBERON:0000411!4.82e-07!10;UBERON:0001950!4.82e-07!10;UBERON:0004121!5.72e-07!102;UBERON:0000924!5.72e-07!102;UBERON:0006601!5.72e-07!102 | |ontology_enrichment_uberon=UBERON:0002346!3.45e-09!71;UBERON:0003075!3.45e-09!71;UBERON:0007284!3.45e-09!71;UBERON:0001017!1.29e-08!73;UBERON:0005743!1.29e-08!73;UBERON:0002020!1.48e-08!34;UBERON:0000073!9.26e-08!75;UBERON:0001016!9.26e-08!75;UBERON:0001049!3.02e-07!52;UBERON:0005068!3.02e-07!52;UBERON:0006241!3.02e-07!52;UBERON:0007135!3.02e-07!52;UBERON:0003056!3.26e-07!49;UBERON:0002021!4.82e-07!10;UBERON:0000411!4.82e-07!10;UBERON:0001950!4.82e-07!10;UBERON:0004121!5.72e-07!102;UBERON:0000924!5.72e-07!102;UBERON:0006601!5.72e-07!102 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010314,1.32e-10,92;UBERON:0002346,1.39e-10,64;UBERON:0003075,1.39e-10,64;UBERON:0007284,1.39e-10,64;UBERON:0002020,3.65e-09,34;UBERON:0001017,5.35e-09,73;UBERON:0010371,6.85e-09,73;UBERON:0001016,2.58e-08,75;UBERON:0002021,3.47e-08,10;UBERON:0000411,3.47e-08,10;UBERON:0001950,3.47e-08,10;UBERON:0004121,8.16e-08,95;UBERON:0000924,8.16e-08,95;UBERON:0006601,8.16e-08,95;UBERON:0001049,9.25e-08,52;UBERON:0005068,9.25e-08,52;UBERON:0006241,9.25e-08,52;UBERON:0007135,9.25e-08,52;UBERON:0003056,1.41e-07,49;UBERON:0000073,2.18e-07,54;UBERON:0002619,3.38e-07,17;UBERON:0002780,8.22e-07,39;UBERON:0001890,8.22e-07,39;UBERON:0006240,8.22e-07,39 | |||
|phase1_expression=1.44133962394315,0,0,0,0,0.16787927191189,0.700837921786577,1.67860320474049,3.66050677594334,3.97909694747389,0,0.558405112967355,0.171200729931206,0.786783621770977,0.666219523631325,0.607425802169478,0.699561878128147,2.68142840554502,1.64537320326887,1.27316895539409,4.84746753861098,1.39007331681239,0.261199789138935,0.47997726838022,0.45881856213434,0,0.430761996159075,0,0,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0.418531630736908,0,0.523523743973798,1.76469446409304,0,0.485510353031154,0.125896817975577,0.506884656097573,0.367093504323363,0,0,0,0,0.139986421625363,0,6.04017381807851,2.17608642603403,2.68875039313971,1.02903774414379,0.286533439938757,0,3.23706337375356,1.5869729378161,3.1691570175309,0,0,0,0,0,0.299600110518405,0.768436610643109,1.03689612308478,0.810035629990144,0.420649922702764,2.85650984403804,1.98781686856452,0.979926393719632,1.72521847832825,1.83843757322004,1.10115880999389,0.766124028511126,1.0752457327937,1.05509030184155,1.64677758484337,2.6045668527838,0.558365998002762,0.56276261003168,0.763991238884051,4.41942878210502,3.27454865837937,4.10078780815661,0.075726193333184,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.702222100658759,0.852151612890289,0.519572009205738,1.06001872353102,1.26759077799012,1.28326477414318,0,0,0,0,0,0.91347103775248,0.517875767294343,0.742210695324124,0.867426633830679,1.52232739156071,0.461230994512117,1.20578112442098,1.88141931417128,0.125666591329675,1.48316980640624,1.3013942122792,0.884610551949874,1.45590164952668,1.10420759230197,0.484875253135222,0,0.585561594023094,2.30391377494801,0,1.43778149407104,1.19980546198682,1.14363204365758,0.599162557619291,4.11750542536764,1.7591609295801,3.82413504423008,4.60287823194595,0.41557608911912,2.10913641988085,1.2220723662038,4.97627882440372,22.7450482590307,0.210441855886474,1.56144531555244,1.83921683546778,1.26043490863744,1.9591626318643,1.56483948048054,1.15302348256365,1.21812241927647,1.03481348295606,0.215567992932842,1.32374256117473,1.40760899331159,1.09597866213787,0.834141747676794,1.0447564995665,0.61734640922383,1.59227413454795,0.702213187313235,1.28673953557358,0.852490498186778,1.24275463521301,0.234526059981096,1.08037236876609,0.946978942340841,1.18058539048442,0.925602677324269,0.930135779001631,1.3413670069981,1.5179494507732,1.15191894939436,2.46251196118643,2.43206428637567,1.75439984910399,2.19550115291051,2.01309628140558,2.94405927989778,2.6755199218614,0,0.528901133327089,1.91959425481711,2.09013004674395,0.902072229254653,0.605050573870028,1.11189021922435,0.760902504450237,0.474529061544512,1.81168850196412,0.502670417600539,0.198956472041151,0.38992817423824,0,0.432276099749388,0.995706366271836,0.379335801906163,1.37098215131675,1.1270773567308,1.62921062276251,1.35766741017338,2.52488951605147,2.02356918797623,1.32849133181642,0.31399745568275,0.493588655687202,0.296452627087149,0.83422552858047,0.393117990226406,0.224862112384854,0.405720242777006,0,0,0,0.486405680325106,0,0,0,0.624075346229121,0,0.358794827043824,2.41221760681684,0.554259570499814,1.32643988239339,1.62964976442026,1.01847051465113,1.17345124144251,0.670025029767263,0.952174563544055,1.56106918286239,1.10344600874334,1.99318220683897,1.59454768657487,0.81931657357869,0.172684981865896,0.723245292907558,0,0,1.47529281905711,0.551873492609465,0.642202359951168,1.17211686592203,0.491804836130026,1.00988370881749,3.47059041357882,3.51394869866975,3.23135096599198,0.716906393857656,1.11399337041197,1.13230612315533,1.21443210502468,1.16902343164525,3.16230222357219,0.642642632843614,0.709700426041343,1.95872164033981,1.46598263418218,0.494910368917606,0,0.971122544619926,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0.775284879504663,0.363533729477506,0,0.948110273807448,0,0,0.340439605753788,1.08036656418786,0.646793418913773,1.71469628025274,1.59606210278046,1.24858172321449,1.64549020602121,1.522324745573,0.23467170806371,0.63549621259146,0,0,0.645857706783622,0.663442174209714,0.238744688006273,0.164140899745061,0.874442509889552,1.11255181206306,0.170870880797853,0.412773735926445,1.29636169158798,0.188368457004691,0.410082683163076,0.915112692826091,1.69978429993855,1.6794174278839,2.21119958087078,0,1.26534397432454,1.62655573701479,1.08005340821801,1.67270636811575,1.09181281873089,0.404593039154462,0.743881101528023,0.26175594198403,0,0,37.2037339531566,0.448549638131936,0.992750942742586,1.16670713006429,0.387479470433193,0.675824501963113,0.821500670520278,0.781226309063701,0.524296722128554,21.0178185118625,16.9937703692141,0.632022241256357,0.405450430580328,0.513554785824136,0,0.537080087002444,0.39736270956253,0.961563596159751,0.590758108698309,0.706765149637033,0.685861259894999,0.806609481094724,0.487289403698762,0.865906574762965,1.28564592399726,0.453460767230423,0,0.179427713218951,0,0.386379188064381,1.12609485270709,0.915758121336325,0.214368379079066,0,4.51801474093653,4.60325236507177,4.58316410751517,3.09335728218638,2.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|phase1_expression=1.44133962394315,0,0,0,0,0.16787927191189,0.700837921786577,1.67860320474049,3.66050677594334,3.97909694747389,0,0.558405112967355,0.171200729931206,0.786783621770977,0.666219523631325,0.607425802169478,0.699561878128147,2.68142840554502,1.64537320326887,1.27316895539409,4.84746753861098,1.39007331681239,0.261199789138935,0.47997726838022,0.45881856213434,0,0.430761996159075,0,0,0,0.443461021310609,0,0,0,0.288851619751275,0,0,0.418531630736908,0,0.523523743973798,1.76469446409304,0,0.485510353031154,0.125896817975577,0.506884656097573,0.367093504323363,0,0,0,0,0.139986421625363,0,6.04017381807851,2.17608642603403,2.68875039313971,1.02903774414379,0.286533439938757,0,3.23706337375356,1.5869729378161,3.1691570175309,0,0,0,0,0,0.299600110518405,0.768436610643109,1.03689612308478,0.810035629990144,0.420649922702764,2.85650984403804,1.98781686856452,0.979926393719632,1.72521847832825,1.83843757322004,1.10115880999389,0.766124028511126,1.0752457327937,1.05509030184155,1.64677758484337,2.6045668527838,0.558365998002762,0.56276261003168,0.763991238884051,4.41942878210502,3.27454865837937,4.10078780815661,0.075726193333184,0.0755715601067855,1.15945795480671,0,0,0,0,0,0.702222100658759,0.852151612890289,0.519572009205738,1.06001872353102,1.26759077799012,1.28326477414318,0,0,0,0,0,0.91347103775248,0.517875767294343,0.742210695324124,0.867426633830679,1.52232739156071,0.461230994512117,1.20578112442098,1.88141931417128,0.125666591329675,1.48316980640624,1.3013942122792,0.884610551949874,1.45590164952668,1.10420759230197,0.484875253135222,0,0.585561594023094,2.30391377494801,0,1.43778149407104,1.19980546198682,1.14363204365758,0.599162557619291,4.11750542536764,1.7591609295801,3.82413504423008,4.60287823194595,0.41557608911912,2.10913641988085,1.2220723662038,4.97627882440372,22.7450482590307,0.210441855886474,1.56144531555244,1.83921683546778,1.26043490863744,1.9591626318643,1.56483948048054,1.15302348256365,1.21812241927647,1.03481348295606,0.215567992932842,1.32374256117473,1.40760899331159,1.09597866213787,0.834141747676794,1.0447564995665,0.61734640922383,1.59227413454795,0.702213187313235,1.28673953557358,0.852490498186778,1.24275463521301,0.234526059981096,1.08037236876609,0.946978942340841,1.18058539048442,0.925602677324269,0.930135779001631,1.3413670069981,1.5179494507732,1.15191894939436,2.46251196118643,2.43206428637567,1.75439984910399,2.19550115291051,2.01309628140558,2.94405927989778,2.6755199218614,0,0.528901133327089,1.91959425481711,2.09013004674395,0.902072229254653,0.605050573870028,1.11189021922435,0.760902504450237,0.474529061544512,1.81168850196412,0.502670417600539,0.198956472041151,0.38992817423824,0,0.432276099749388,0.995706366271836,0.379335801906163,1.37098215131675,1.1270773567308,1.62921062276251,1.35766741017338,2.52488951605147,2.02356918797623,1.32849133181642,0.31399745568275,0.493588655687202,0.296452627087149,0.83422552858047,0.393117990226406,0.224862112384854,0.405720242777006,0,0,0,0.486405680325106,0,0,0,0.624075346229121,0,0.358794827043824,2.41221760681684,0.554259570499814,1.32643988239339,1.62964976442026,1.01847051465113,1.17345124144251,0.670025029767263,0.952174563544055,1.56106918286239,1.10344600874334,1.99318220683897,1.59454768657487,0.81931657357869,0.172684981865896,0.723245292907558,0,0,1.47529281905711,0.551873492609465,0.642202359951168,1.17211686592203,0.491804836130026,1.00988370881749,3.47059041357882,3.51394869866975,3.23135096599198,0.716906393857656,1.11399337041197,1.13230612315533,1.21443210502468,1.16902343164525,3.16230222357219,0.642642632843614,0.709700426041343,1.95872164033981,1.46598263418218,0.494910368917606,0,0.971122544619926,0.302323556964751,0.565815239267694,0.295301892880773,0.307435147943927,0.775284879504663,0.363533729477506,0,0.948110273807448,0,0,0.340439605753788,1.08036656418786,0.646793418913773,1.71469628025274,1.59606210278046,1.24858172321449,1.64549020602121,1.522324745573,0.23467170806371,0.63549621259146,0,0,0.645857706783622,0.663442174209714,0.238744688006273,0.164140899745061,0.874442509889552,1.11255181206306,0.170870880797853,0.412773735926445,1.29636169158798,0.188368457004691,0.410082683163076,0.915112692826091,1.69978429993855,1.6794174278839,2.21119958087078,0,1.26534397432454,1.62655573701479,1.08005340821801,1.67270636811575,1.09181281873089,0.404593039154462,0.743881101528023,0.26175594198403,0,0,37.2037339531566,0.448549638131936,0.992750942742586,1.16670713006429,0.387479470433193,0.675824501963113,0.821500670520278,0.781226309063701,0.524296722128554,21.0178185118625,16.9937703692141,0.632022241256357,0.405450430580328,0.513554785824136,0,0.537080087002444,0.39736270956253,0.961563596159751,0.590758108698309,0.706765149637033,0.685861259894999,0.806609481094724,0.487289403698762,0.865906574762965,1.28564592399726,0.453460767230423,0,0.179427713218951,0,0.386379188064381,1.12609485270709,0.915758121336325,0.214368379079066,0,4.51801474093653,4.60325236507177,4.58316410751517,3.09335728218638,2.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| ||
|short_description=p2@Gopc | |short_description=p2@Gopc | ||
}} | }} |
Latest revision as of 01:57, 26 September 2015
Short description: | p2@Gopc |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Gopc_5end |
Coexpression cluster: | MCL_coexpression_mm9:1026 |
Association with transcript: | 134bp_to_ENSMUST00000020008, ENSMUST00000105475_5end |
EntrezGene: | Gopc |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
structure with developmental contribution from neural crest | 1.32e-10 | 92 |
neurectoderm | 1.39e-10 | 64 |
neural plate | 1.39e-10 | 64 |
presumptive neural plate | 1.39e-10 | 64 |
gray matter | 3.65e-09 | 34 |
central nervous system | 5.35e-09 | 73 |
ecto-epithelium | 6.85e-09 | 73 |
nervous system | 2.58e-08 | 75 |
occipital lobe | 3.47e-08 | 10 |
visual cortex | 3.47e-08 | 10 |
neocortex | 3.47e-08 | 10 |
ectoderm-derived structure | 8.16e-08 | 95 |
ectoderm | 8.16e-08 | 95 |
presumptive ectoderm | 8.16e-08 | 95 |
neural tube | 9.25e-08 | 52 |
neural rod | 9.25e-08 | 52 |
future spinal cord | 9.25e-08 | 52 |
neural keel | 9.25e-08 | 52 |
pre-chordal neural plate | 1.41e-07 | 49 |
regional part of nervous system | 2.18e-07 | 54 |
regional part of cerebral cortex | 3.38e-07 | 17 |
regional part of forebrain | 8.22e-07 | 39 |
forebrain | 8.22e-07 | 39 |
future forebrain | 8.22e-07 | 39 |