Personal tools

FFCP PHASE1:Mm9::chr4:102684562..102684575,-: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
 
(7 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|id=chr4:102684562..102684575,-
|DHSsupport=NA
|short_description=p1@BB031773
|DPIdataset=NA
|description=CAGE_peak_1_at_BB031773_5end
|association_with_transcript=0bp_to_ENSMUST00000148892,NR_028391,uc008twz.1_5end
|EntrezGene=100473
|EntrezGene=100473
|HGNC=
|HGNC=
|MCL_coexpression_id=4
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=0bp_to_ENSMUST00000148892,NR_028391,uc008twz.1_5end
|cluster_id=chr4:102684562..102684575,-
|description=CAGE_peak_1_at_BB031773_5end
|id=chr4:102684562..102684575,-
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002370!4.84e-30!23;UBERON:0000974!4.84e-30!23;UBERON:0004807!4.84e-30!23;UBERON:0005058!4.84e-30!23;UBERON:0003351!4.84e-30!23;UBERON:0009113!4.84e-30!23;UBERON:0003295!4.84e-30!23;UBERON:0009722!4.84e-30!23;UBERON:0005562!4.84e-30!23;UBERON:0007690!4.84e-30!23;UBERON:0006562!1.01e-28!24;UBERON:0003408!1.01e-28!24;UBERON:0001557!1.01e-28!24;UBERON:0001042!1.01e-28!24;UBERON:0008814!1.01e-28!24;UBERON:0009145!1.01e-28!24;UBERON:0000072!2.42e-25!27;UBERON:0004177!1.77e-23!29;UBERON:0000063!3.70e-19!35;UBERON:0000065!4.26e-16!41;UBERON:0001004!1.13e-15!42;UBERON:0005057!6.87e-15!51;UBERON:0002390!1.65e-14!45;UBERON:0003061!1.65e-14!45;UBERON:0003929!1.15e-13!55;UBERON:0002193!1.73e-13!48;UBERON:0002368!2.31e-12!60;UBERON:0002530!2.94e-11!65;UBERON:0000490!4.67e-11!66;UBERON:0005911!1.73e-10!69;UBERON:0002405!2.60e-10!70;UBERON:0000949!5.73e-10!72;UBERON:0007811!2.21e-09!86;UBERON:0000153!2.13e-08!94;UBERON:0003081!9.15e-08!88;UBERON:0001041!2.34e-07!92;UBERON:0000077!7.16e-07!97
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.39e-37,23;UBERON:0000974,1.39e-37,23;UBERON:0004807,1.39e-37,23;UBERON:0005058,1.39e-37,23;UBERON:0003351,1.39e-37,23;UBERON:0009113,1.39e-37,23;UBERON:0003295,1.39e-37,23;UBERON:0009722,1.39e-37,23;UBERON:0005562,1.39e-37,23;UBERON:0007690,1.39e-37,23;UBERON:0006562,5.24e-36,24;UBERON:0003408,5.24e-36,24;UBERON:0001557,5.24e-36,24;UBERON:0001042,5.24e-36,24;UBERON:0008814,5.24e-36,24;UBERON:0009145,5.24e-36,24;UBERON:0000072,5.59e-32,27;UBERON:0004177,9.35e-30,29;UBERON:0005057,9.35e-30,29;UBERON:0000077,1.33e-24,35;UBERON:0007811,6.53e-24,36;UBERON:0000065,5.93e-21,41;UBERON:0001004,1.91e-20,42;UBERON:0000153,5.82e-20,43;UBERON:0002390,4.66e-19,45;UBERON:0003061,4.66e-19,45;UBERON:0002193,7.66e-18,48;UBERON:0002405,7.66e-18,48;UBERON:0003929,1.62e-15,55;UBERON:0002368,3.46e-14,60;UBERON:0002530,4.65e-13,65;UBERON:0000490,7.46e-13,66;UBERON:0005911,2.84e-12,69;UBERON:0000949,9.68e-12,72;UBERON:0001041,1.63e-10,80;UBERON:0003081,1.27e-09,87;UBERON:0004921,3.40e-07,114;UBERON:0001007,4.64e-07,116;UBERON:0001555,4.64e-07,116;UBERON:0007026,4.64e-07,116;UBERON:0004119,6.28e-07,118;UBERON:0000925,6.28e-07,118;UBERON:0006595,6.28e-07,118;UBERON:0000926,8.41e-07,120;UBERON:0004120,8.41e-07,120;UBERON:0006603,8.41e-07,120
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9606672376907,0,0,0.129920822977795,0.179026695667481,3.77494574084403,3.72605893511903,4.28299628806274,7.06765149637033,5.10585604588499,8.67105192176829,10.8178247621125,14.3355644044091,17.5315353272353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136072998302656,0.12811372028485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146199987425332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252578877947112,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.9606672376907,0,0,0.129920822977795,0.179026695667481,3.77494574084403,3.72605893511903,4.28299628806274,7.06765149637033,5.10585604588499,8.67105192176829,10.8178247621125,14.3355644044091,17.5315353272353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0
|short_description=p1@BB031773
}}
}}

Latest revision as of 01:58, 26 September 2015

Short description:p1@BB031773
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_BB031773_5end
Coexpression cluster:MCL_coexpression_mm9:4
Association with transcript: 0bp_to_ENSMUST00000148892, NR_028391, uc008twz.1_5end
EntrezGene:BB031773
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression




0
5
10
15
20




  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data