FFCP PHASE1:Mm9::chr10:61885112..61885123,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=216019 | |EntrezGene=216019 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=12 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=32bp_to_ENSMUST00000159579_5end | |association_with_transcript=32bp_to_ENSMUST00000159579_5end | ||
|cluster_id=chr10:61885112..61885123,- | |||
|description=CAGE_peak_4_at_Hkdc1_5end | |description=CAGE_peak_4_at_Hkdc1_5end | ||
|id=chr10:61885112..61885123,- | |id=chr10:61885112..61885123,- | ||
|ontology_enrichment_celltype=CL:0002563!3.70e-07!9;CL:0002251!3.70e-07!9 | |ontology_enrichment_celltype=CL:0002563!3.70e-07!9;CL:0002251!3.70e-07!9 | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!6.20e-28!43;UBERON:0005409!1.80e-23!59;UBERON:0004119!1.64e-13!130;UBERON:0000925!1.64e-13!130;UBERON:0006595!1.64e-13!130;UBERON:0001007!1.07e-12!128;UBERON:0001555!1.07e-12!128;UBERON:0007026!1.07e-12!128;UBERON:0000344!6.43e-12!15;UBERON:0004921!1.46e-11!126;UBERON:0004185!1.46e-11!126;UBERON:0004923!1.26e-10!24;UBERON:0001242!2.75e-10!13;UBERON:0000060!2.75e-10!13;UBERON:0001262!2.75e-10!13;UBERON:0004786!2.75e-10!13;UBERON:0002108!2.44e-09!16;UBERON:0001045!3.03e-07!13;UBERON:0003350!3.70e-07!9;UBERON:0004808!3.70e-07!9;UBERON:0001277!3.70e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,1.32e-27,31;UBERON:0005409,7.39e-18,47;UBERON:0004119,1.01e-11,118;UBERON:0000925,1.01e-11,118;UBERON:0006595,1.01e-11,118;UBERON:0001007,3.57e-11,116;UBERON:0001555,3.57e-11,116;UBERON:0007026,3.57e-11,116;UBERON:0000344,4.08e-10,15;UBERON:0004921,1.31e-09,114;UBERON:0004923,1.80e-08,24;UBERON:0001242,2.01e-07,13;UBERON:0001262,2.01e-07,13;UBERON:0004786,2.01e-07,13;UBERON:0001264,3.25e-07,12 | |||
|phase1_expression=0,4.88565570695105,1.81999695755814,6.95667686005709,8.01433167914156,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.55987876469451,2.52350209173887,1.72269589234506,0.86152399231815,0.861884930743556,4.94060890586572,4.03248207615889,0.443461021310609,0,0,0,0.577703239502549,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0.230615497256059,0,0,0,16.8092578059374,0,0,0,0,0,3.72783522436244,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0.60281927134286,1.97305847538851,2.3060469651273,1.59292931751539,0,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94753809370836,3.96675849995316,0,0.232236671860439,0.128867461322093,1.61346819698674,4.00280478920767,3.23383564391351,3.79623249235609,2.47048432086016,1.50801125280162,1.79060824837036,1.36474860983384,4.49409704327111,6.05186539649144,5.57595565112228,0,0.114248512609729,0,0,0.387904974335251,0,0.189709611372772,0.295220295959204,0.156998727841375,0,0,0,0.196558995113203,0,1.01430060694251,2.41177159752417,2.03700681425136,2.5892652370573,0,0,0,0,0,0,0,0,1.10851914099963,0,0,0.169745085775188,0,0.670025029767263,2.85652369063216,0.975668239288994,0.315270288212382,0.44292937929755,0.637819074629948,1.3109065177259,0.690739927463582,2.31438493730419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,1.32745138339963,0.485561272309963,3.02323556964751,5.09233715340925,7.08724542913855,7.07100840271033,0.775284879504663,0.363533729477506,1.06949213515416,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,1.0591603543191,0,0,0,0,0,0,3.20628920292836,0,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0.406638934253697,0.324016022465404,0.209088296014469,0.655087691238533,0,0,0,1.8146096260851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0.551530525350042,0.222246727801615,0,0.64183841918363,0.758091635291392,1.2673964994512,0.188626341386076,0.468207537349412,0.512201219238954,0.574354689556133,0,0.347652977834566,0.38581844092741,0.824171801606613,0.588795680537589,0.685738504770831,0,0.238436189947321,0.290692833264657,0.658765662907314,0.338458431566706,0.365855945745545,0.789209134313529,0.543216455383447,0,0.355905054372522,0.689531376628944,0.409231043169689,0.619747364743864,0.578719832943424,0,0.467863216890817,0,0,0,0 | |phase1_expression=0,4.88565570695105,1.81999695755814,6.95667686005709,8.01433167914156,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,2.55987876469451,2.52350209173887,1.72269589234506,0.86152399231815,0.861884930743556,4.94060890586572,4.03248207615889,0.443461021310609,0,0,0,0.577703239502549,0.498703936075477,0.408338712524738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0,0,0.230615497256059,0,0,0,16.8092578059374,0,0,0,0,0,3.72783522436244,0,0,3.32094171771169,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0,0,0,0,0,0.180062129805349,0.60281927134286,1.97305847538851,2.3060469651273,1.59292931751539,0,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.94753809370836,3.96675849995316,0,0.232236671860439,0.128867461322093,1.61346819698674,4.00280478920767,3.23383564391351,3.79623249235609,2.47048432086016,1.50801125280162,1.79060824837036,1.36474860983384,4.49409704327111,6.05186539649144,5.57595565112228,0,0.114248512609729,0,0,0.387904974335251,0,0.189709611372772,0.295220295959204,0.156998727841375,0,0,0,0.196558995113203,0,1.01430060694251,2.41177159752417,2.03700681425136,2.5892652370573,0,0,0,0,0,0,0,0,1.10851914099963,0,0,0.169745085775188,0,0.670025029767263,2.85652369063216,0.975668239288994,0.315270288212382,0.44292937929755,0.637819074629948,1.3109065177259,0.690739927463582,2.31438493730419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292255857911312,0,0,0,0,0,0,1.32745138339963,0.485561272309963,3.02323556964751,5.09233715340925,7.08724542913855,7.07100840271033,0.775284879504663,0.363533729477506,1.06949213515416,0,1.05418608574999,0,0,0,0,0,0,0,0,0,0.23467170806371,1.0591603543191,0,0,0,0,0,0,3.20628920292836,0,0,0.412773735926445,0.185194527369712,0,0,0,0,0,0,0,0,0.406638934253697,0.324016022465404,0.209088296014469,0.655087691238533,0,0,0,1.8146096260851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.419226325255965,0.551530525350042,0.222246727801615,0,0.64183841918363,0.758091635291392,1.2673964994512,0.188626341386076,0.468207537349412,0.512201219238954,0.574354689556133,0,0.347652977834566,0.38581844092741,0.824171801606613,0.588795680537589,0.685738504770831,0,0.238436189947321,0.290692833264657,0.658765662907314,0.338458431566706,0.365855945745545,0.789209134313529,0.543216455383447,0,0.355905054372522,0.689531376628944,0.409231043169689,0.619747364743864,0.578719832943424,0,0.467863216890817,0,0,0,0 | ||
|short_description=p4@Hkdc1 | |short_description=p4@Hkdc1 | ||
}} | }} |
Latest revision as of 04:22, 26 September 2015
Short description: | p4@Hkdc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Hkdc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:12 |
Association with transcript: | 32bp_to_ENSMUST00000159579_5end |
EntrezGene: | Hkdc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestine | 1.32e-27 | 31 |
gastrointestinal system | 7.39e-18 | 47 |
endoderm-derived structure | 1.01e-11 | 118 |
endoderm | 1.01e-11 | 118 |
presumptive endoderm | 1.01e-11 | 118 |
digestive system | 3.57e-11 | 116 |
digestive tract | 3.57e-11 | 116 |
primitive gut | 3.57e-11 | 116 |
mucosa | 4.08e-10 | 15 |
subdivision of digestive tract | 1.31e-09 | 114 |
organ component layer | 1.80e-08 | 24 |
intestinal mucosa | 2.01e-07 | 13 |
wall of intestine | 2.01e-07 | 13 |
gastrointestinal system mucosa | 2.01e-07 | 13 |
pancreas | 3.25e-07 | 12 |