FFCP PHASE1:Mm9::chr14:61928697..61928708,+: Difference between revisions
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{{FFCP|EntrezGene=219144|HGNC=|MCL_coexpression_id=3|UniProt=Q6P3A9|association_with_transcript=107bp_to_ENSMUST00000055159,NM_177337,uc007ufu.1_5end|description=CAGE_peak_3_at_Arl11_5end|id=chr14:61928697..61928708,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000355,2.11e-15,9|ontology_enrichment_disease=DOID:0060100!1.70e-09!3;DOID:4045!1.70e-09!3|ontology_enrichment_disease_v019_2=DOID:0060100,2.33e-44,3;DOID:4045,2.33e-44,3;DOID:0050686,1.14e-22,6|ontology_enrichment_uberon=UBERON:0002106!6.83e-10!6;UBERON:0004457!6.83e-10!6;UBERON:0000042!6.83e-10!6;UBERON:0004854!6.83e-10!6;UBERON:0009034!6.83e-10!6;UBERON:0002095!6.83e-10!6;UBERON:0004782!6.83e-10!6;UBERON:0003281!6.83e-10!6;UBERON:0009664!6.83e-10!6;UBERON:0002296!6.83e-10!6;UBERON:0005602!6.83e-10!6;UBERON:0001179!6.83e-10!6;UBERON:0006293!6.83e-10!6|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.11e-15,9;UBERON:0002036,2.11e-15,9;UBERON:0002385,2.11e-15,9;UBERON:0000486,2.11e-15,9;UBERON:0007503,2.11e-15,9;UBERON:0001015,2.11e-15,9;UBERON:0002329,2.11e-15,9;UBERON:0003082,2.11e-15,9;UBERON:0003059,2.11e-15,9;UBERON:0007282,2.11e-15,9;UBERON:0004290,2.11e-15,9;UBERON:0009618,2.11e-15,9;UBERON:0000383,6.08e-14,10;UBERON:0007524,9.53e-13,11;UBERON:0003077,9.53e-13,11;UBERON:0007285,9.53e-13,11|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3227335987394,8.5946887897618,15.7057123192139,15.2940186888064,5.46436387966757,14.0798002379035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0.635351135365324,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.412773735926445,0.370389054739423,0.188368457004691,0.136694227721025,0,0.339956859987711,0.559805809294632,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421|short_description=p3@Arl11}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=219144 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=Q6P3A9 | |||
|association_with_transcript=107bp_to_ENSMUST00000055159,NM_177337,uc007ufu.1_5end | |||
|cluster_id=chr14:61928697..61928708,+ | |||
|description=CAGE_peak_3_at_Arl11_5end | |||
|id=chr14:61928697..61928708,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000355,2.11e-15,9 | |||
|ontology_enrichment_disease=DOID:0060100!1.70e-09!3;DOID:4045!1.70e-09!3 | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,2.33e-44,3;DOID:4045,2.33e-44,3;DOID:0050686,1.14e-22,6 | |||
|ontology_enrichment_uberon=UBERON:0002106!6.83e-10!6;UBERON:0004457!6.83e-10!6;UBERON:0000042!6.83e-10!6;UBERON:0004854!6.83e-10!6;UBERON:0009034!6.83e-10!6;UBERON:0002095!6.83e-10!6;UBERON:0004782!6.83e-10!6;UBERON:0003281!6.83e-10!6;UBERON:0009664!6.83e-10!6;UBERON:0002296!6.83e-10!6;UBERON:0005602!6.83e-10!6;UBERON:0001179!6.83e-10!6;UBERON:0006293!6.83e-10!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,2.11e-15,9;UBERON:0002036,2.11e-15,9;UBERON:0002385,2.11e-15,9;UBERON:0000486,2.11e-15,9;UBERON:0007503,2.11e-15,9;UBERON:0001015,2.11e-15,9;UBERON:0002329,2.11e-15,9;UBERON:0003082,2.11e-15,9;UBERON:0003059,2.11e-15,9;UBERON:0007282,2.11e-15,9;UBERON:0004290,2.11e-15,9;UBERON:0009618,2.11e-15,9;UBERON:0000383,6.08e-14,10;UBERON:0007524,9.53e-13,11;UBERON:0003077,9.53e-13,11;UBERON:0007285,9.53e-13,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.198581902401771,0,0.159992422793407,0,0,0,0,0,0,0,0,0,0,0,0,0,16.3227335987394,8.5946887897618,15.7057123192139,15.2940186888064,5.46436387966757,14.0798002379035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0,0,0.635351135365324,0,0,0,0,0,0,0,0,0,0,0.210441855886474,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.772043721344145,0.852490498186778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0.287696137450811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.390267295715598,0.157635144106191,0.221464689648775,0.159454768657487,0.327726629431476,0,0.144649058581512,0,0.54390568381871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170870880797853,0.412773735926445,0.370389054739423,0.188368457004691,0.136694227721025,0,0.339956859987711,0.559805809294632,0.414599921413271,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214368379079066,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0,0,0,0,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.231867835620421 | |||
|short_description=p3@Arl11 | |||
}} |
Latest revision as of 05:13, 26 September 2015
Short description: | p3@Arl11 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Arl11_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | 107bp_to_ENSMUST00000055159, NM_177337, uc007ufu.1_5end |
EntrezGene: | Arl11 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi-potent skeletal muscle stem cell | 2.11e-15 | 9 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 2.11e-15 | 9 |
striated muscle tissue | 2.11e-15 | 9 |
muscle tissue | 2.11e-15 | 9 |
multilaminar epithelium | 2.11e-15 | 9 |
epithelial vesicle | 2.11e-15 | 9 |
musculature | 2.11e-15 | 9 |
somite | 2.11e-15 | 9 |
myotome | 2.11e-15 | 9 |
presomitic mesoderm | 2.11e-15 | 9 |
presumptive segmental plate | 2.11e-15 | 9 |
dermomyotome | 2.11e-15 | 9 |
trunk paraxial mesoderm | 2.11e-15 | 9 |
musculature of body | 6.08e-14 | 10 |
dense mesenchyme tissue | 9.53e-13 | 11 |
paraxial mesoderm | 9.53e-13 | 11 |
presumptive paraxial mesoderm | 9.53e-13 | 11 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 2.33e-44 | 3 |
muscle cancer | 2.33e-44 | 3 |
organ system cancer | 1.14e-22 | 6 |