FFCP PHASE2:Mm9::chr9:110148719..110148740,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:29873 |HGNC= |MCL_coexpression_id=2 |TSSclassifier=NA |UniProt=uniprot:Q71M36 |association_with_transcript=-58bp_to...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=29873 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q71M36 | ||
|association_with_transcript=-58bp_to_uc009rtu.1_5end | |association_with_transcript=-58bp_to_uc009rtu.1_5end | ||
|cluster_id=chr9:110148719..110148740,+ | |cluster_id=chr9:110148719..110148740,+ | ||
Latest revision as of 05:22, 26 September 2015
| Short description: | p1@Cspg5 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_1_at_Cspg5_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2 |
| Association with transcript: | -58bp_to_uc009rtu.1_5end |
| EntrezGene: | Cspg5 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@Cspg5 |
|---|
0
5
10
15
20
25
30
35
40
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 3.68e-15 | 23 |
| neuroblast (sensu Vertebrata) | 3.68e-15 | 23 |
| neural cell | 3.56e-13 | 43 |
| ectodermal cell | 9.47e-13 | 44 |
| neurectodermal cell | 9.47e-13 | 44 |
| neuron | 1.20e-10 | 33 |
| neuronal stem cell | 1.20e-10 | 33 |
| neuroblast | 1.20e-10 | 33 |
| electrically signaling cell | 1.20e-10 | 33 |
| electrically responsive cell | 2.19e-08 | 39 |
Showing 1 to 10 of 11 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 5.14e-39 | 73 |
| nervous system | 1.09e-37 | 75 |
| regional part of nervous system | 1.20e-36 | 54 |
| neurectoderm | 1.05e-34 | 64 |
| neural plate | 1.05e-34 | 64 |
| presumptive neural plate | 1.05e-34 | 64 |
| ectoderm-derived structure | 4.48e-34 | 95 |
| ectoderm | 4.48e-34 | 95 |
| presumptive ectoderm | 4.48e-34 | 95 |
| gray matter | 5.47e-34 | 34 |
Showing 1 to 10 of 57 entries
