FFCP PHASE1:Mm9::chr4:116799405..116799423,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=242646 | |EntrezGene=242646 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=204 | |||
|TSSclassifier=NA | |||
|UniProt=Q8CDY7 | |UniProt=Q8CDY7 | ||
|association_with_transcript=0bp_to_ENSMUST00000062206,NM_175030,uc008uia.1_5end | |association_with_transcript=0bp_to_ENSMUST00000062206,NM_175030,uc008uia.1_5end | ||
|cluster_id=chr4:116799405..116799423,+ | |||
|description=CAGE_peak_1_at_Tctex1d4_5end | |description=CAGE_peak_1_at_Tctex1d4_5end | ||
|id=chr4:116799405..116799423,+ | |id=chr4:116799405..116799423,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000878,3.32e-10,2;CL:0000129,3.32e-10,2;CL:0002453,7.99e-09,8;CL:0000333,4.45e-07,10;CL:0000095,4.45e-07,10;CL:0000243,4.45e-07,10;CL:0000123,4.45e-07,10;CL:0000125,4.45e-07,10;CL:0000030,4.45e-07,10;CL:0000339,4.45e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!3.10e-09!14;UBERON:0000117!3.10e-09!14;UBERON:0000171!3.10e-09!14;UBERON:0000170!3.10e-09!14;UBERON:0005597!3.10e-09!14;UBERON:0000118!3.10e-09!14;UBERON:0005178!2.81e-08!17;UBERON:0005181!2.81e-08!17;UBERON:0002224!2.81e-08!17;UBERON:0000915!2.81e-08!17;UBERON:0008947!2.81e-08!17;UBERON:0003258!2.81e-08!17;UBERON:0005153!5.67e-07!17 | |ontology_enrichment_uberon=UBERON:0002048!3.10e-09!14;UBERON:0000117!3.10e-09!14;UBERON:0000171!3.10e-09!14;UBERON:0000170!3.10e-09!14;UBERON:0005597!3.10e-09!14;UBERON:0000118!3.10e-09!14;UBERON:0005178!2.81e-08!17;UBERON:0005181!2.81e-08!17;UBERON:0002224!2.81e-08!17;UBERON:0000915!2.81e-08!17;UBERON:0008947!2.81e-08!17;UBERON:0003258!2.81e-08!17;UBERON:0005153!5.67e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,1.03e-29,14;UBERON:0000117,1.03e-29,14;UBERON:0000171,1.03e-29,14;UBERON:0000170,1.03e-29,14;UBERON:0005597,1.03e-29,14;UBERON:0000118,1.03e-29,14;UBERON:0005153,3.32e-24,17;UBERON:0005178,3.32e-24,17;UBERON:0005181,3.32e-24,17;UBERON:0002224,3.32e-24,17;UBERON:0000915,3.32e-24,17;UBERON:0008947,3.32e-24,17;UBERON:0003258,3.32e-24,17;UBERON:0005157,2.40e-20,20;UBERON:0000065,4.03e-09,41;UBERON:0001004,7.25e-09,42 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17646297606203,0,0,0.125896817975577,0.101376931219515,0,0,0,0.659058548203415,2.13872888981712,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39280198933128,45.721978333265,0,0,0,0,0.662605622854841,0.122490799214954,0,0,0,0,0.46081959976873,0.131886287730194,0,0,0,0.56276261003168,0.45839474333043,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0.505524445014783,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0.486723789203273,0,0.248813941220186,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,0.630869845692382,0.514523061896422,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,11.6394509804961,0,0,0,0.234690248288502,2.51259386162724,4.04674189506223,3.31727201358258,2.52216230569906,4.20782910332672,2.71073106717728,3.93271955317771,3.45369963731791,6.50920763616802,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,3.54850213020672,0,0,5.93892442701128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0.21183207086382,0,0,0,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,0,0.920650473014354,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47074806760011,0.888986911206461,0.618105171716683,0.962757628775446,1.51618327058278,0.25347929989024,0.565879024158229,0.655490552289177,0.512201219238954,0.287177344778066,0,0.811190281613988,0.578727661391115,0.412085900803307,0.588795680537589,0.342869252385415,0.70990322463735,0.715308569841963,0.290692833264657,0.470546902076653,0.592302255241736,0.73171189149109,0.789209134313529,0.679020569229309,0.561142271657738,0.830445126869219,0.492522411877817,0,0.464810523557898,0.385813221962283,2.24829520144151,0.701794825336225,0.214871054048298,0,0,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.17646297606203,0,0,0.125896817975577,0.101376931219515,0,0,0,0.659058548203415,2.13872888981712,0.139986421625363,1.43752564364972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.39280198933128,45.721978333265,0,0,0,0,0.662605622854841,0.122490799214954,0,0,0,0,0.46081959976873,0.131886287730194,0,0,0,0.56276261003168,0.45839474333043,0,0.284743361598206,0,0,0,0,0,0,0,0,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0.505524445014783,0.5709193985953,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0.209446706813455,0,0,0,0,0.299581278809645,0,0,0.347648640384553,0.255715457330331,0.20778804455956,0.486723789203273,0,0.248813941220186,1.0108910337347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.348252166522167,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,0.164167464079095,0,0,0,0,0.630869845692382,0.514523061896422,0,0,0,0,0,0,0,0,0,0.164698954724011,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147610147979602,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,11.6394509804961,0,0,0,0.234690248288502,2.51259386162724,4.04674189506223,3.31727201358258,2.52216230569906,4.20782910332672,2.71073106717728,3.93271955317771,3.45369963731791,6.50920763616802,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,3.54850213020672,0,0,5.93892442701128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.304464949114599,0,0.21183207086382,0,0,0,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0,0,0,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0,0,0.100826185136841,0,0,0,0,0,0,0,0.19318959403219,0.375364950902364,0.183151624267265,0,0,0,0.920650473014354,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47074806760011,0.888986911206461,0.618105171716683,0.962757628775446,1.51618327058278,0.25347929989024,0.565879024158229,0.655490552289177,0.512201219238954,0.287177344778066,0,0.811190281613988,0.578727661391115,0.412085900803307,0.588795680537589,0.342869252385415,0.70990322463735,0.715308569841963,0.290692833264657,0.470546902076653,0.592302255241736,0.73171189149109,0.789209134313529,0.679020569229309,0.561142271657738,0.830445126869219,0.492522411877817,0,0.464810523557898,0.385813221962283,2.24829520144151,0.701794825336225,0.214871054048298,0,0,0.231867835620421 | ||
|short_description=p1@Tctex1d4 | |short_description=p1@Tctex1d4 | ||
}} | }} |
Latest revision as of 05:32, 26 September 2015
Short description: | p1@Tctex1d4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Tctex1d4_5end |
Coexpression cluster: | MCL_coexpression_mm9:204 |
Association with transcript: | 0bp_to_ENSMUST00000062206, NM_175030, uc008uia.1_5end |
EntrezGene: | Tctex1d4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 3.32e-10 | 2 |
microglial cell | 3.32e-10 | 2 |
oligodendrocyte precursor cell | 7.99e-09 | 8 |
migratory neural crest cell | 4.45e-07 | 10 |
neuron associated cell | 4.45e-07 | 10 |
glial cell (sensu Vertebrata) | 4.45e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 4.45e-07 | 10 |
glial cell | 4.45e-07 | 10 |
glioblast | 4.45e-07 | 10 |
glioblast (sensu Vertebrata) | 4.45e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
lung | 1.03e-29 | 14 |
respiratory tube | 1.03e-29 | 14 |
respiration organ | 1.03e-29 | 14 |
pair of lungs | 1.03e-29 | 14 |
lung primordium | 1.03e-29 | 14 |
lung bud | 1.03e-29 | 14 |
epithelial bud | 3.32e-24 | 17 |
thoracic cavity element | 3.32e-24 | 17 |
thoracic segment organ | 3.32e-24 | 17 |
thoracic cavity | 3.32e-24 | 17 |
thoracic segment of trunk | 3.32e-24 | 17 |
respiratory primordium | 3.32e-24 | 17 |
endoderm of foregut | 3.32e-24 | 17 |
epithelial fold | 2.40e-20 | 20 |
respiratory tract | 4.03e-09 | 41 |
respiratory system | 7.25e-09 | 42 |