FFCP PHASE1:Mm9::chr10:75716593..75716611,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=20203 | |EntrezGene=20203 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=20 | |||
|TSSclassifier=NA | |||
|UniProt=P50114 | |UniProt=P50114 | ||
|association_with_transcript=0bp_to_ENSMUST00000036387_5end | |association_with_transcript=0bp_to_ENSMUST00000036387_5end | ||
|cluster_id=chr10:75716593..75716611,+ | |||
|description=CAGE_peak_2_at_S100b_5end | |description=CAGE_peak_2_at_S100b_5end | ||
|id=chr10:75716593..75716611,+ | |id=chr10:75716593..75716611,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0000221,6.27e-08,44;CL:0000133,6.27e-08,44;CL:0002319,1.78e-07,43;CL:0000107,5.02e-07,9;CL:0000540,8.59e-07,33;CL:0000047,8.59e-07,33;CL:0000031,8.59e-07,33;CL:0000404,8.59e-07,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004121!1.98e-18!102;UBERON:0000924!1.98e-18!102;UBERON:0006601!1.98e-18!102;UBERON:0000073!3.99e-18!75;UBERON:0001016!3.99e-18!75;UBERON:0001017!3.50e-17!73;UBERON:0005743!3.50e-17!73;UBERON:0002346!3.28e-12!71;UBERON:0003075!3.28e-12!71;UBERON:0007284!3.28e-12!71;UBERON:0000033!5.67e-11!63;UBERON:0001049!2.19e-10!52;UBERON:0005068!2.19e-10!52;UBERON:0006241!2.19e-10!52;UBERON:0007135!2.19e-10!52;UBERON:0000955!6.76e-10!50;UBERON:0006238!6.76e-10!50;UBERON:0002616!2.30e-09!49;UBERON:0002021!5.08e-07!10;UBERON:0000411!5.08e-07!10;UBERON:0001950!5.08e-07!10 | |ontology_enrichment_uberon=UBERON:0004121!1.98e-18!102;UBERON:0000924!1.98e-18!102;UBERON:0006601!1.98e-18!102;UBERON:0000073!3.99e-18!75;UBERON:0001016!3.99e-18!75;UBERON:0001017!3.50e-17!73;UBERON:0005743!3.50e-17!73;UBERON:0002346!3.28e-12!71;UBERON:0003075!3.28e-12!71;UBERON:0007284!3.28e-12!71;UBERON:0000033!5.67e-11!63;UBERON:0001049!2.19e-10!52;UBERON:0005068!2.19e-10!52;UBERON:0006241!2.19e-10!52;UBERON:0007135!2.19e-10!52;UBERON:0000955!6.76e-10!50;UBERON:0006238!6.76e-10!50;UBERON:0002616!2.30e-09!49;UBERON:0002021!5.08e-07!10;UBERON:0000411!5.08e-07!10;UBERON:0001950!5.08e-07!10 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,2.64e-21,75;UBERON:0001017,3.99e-20,73;UBERON:0004121,3.04e-19,95;UBERON:0000924,3.04e-19,95;UBERON:0006601,3.04e-19,95;UBERON:0000073,2.38e-13,54;UBERON:0002346,3.53e-13,64;UBERON:0003075,3.53e-13,64;UBERON:0007284,3.53e-13,64;UBERON:0010371,7.32e-13,73;UBERON:0001049,5.53e-12,52;UBERON:0005068,5.53e-12,52;UBERON:0006241,5.53e-12,52;UBERON:0007135,5.53e-12,52;UBERON:0000955,2.18e-09,47;UBERON:0006238,2.18e-09,47;UBERON:0002616,8.94e-09,46;UBERON:0002021,1.54e-08,10;UBERON:0000411,1.54e-08,10;UBERON:0001950,1.54e-08,10;UBERON:0000010,4.42e-08,11;UBERON:0003076,6.86e-08,12;UBERON:0003057,6.86e-08,12;UBERON:0010314,8.35e-08,92;UBERON:0002410,5.02e-07,9;UBERON:0002020,7.62e-07,34 | |||
|phase1_expression=3.84357233051505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.39876624314307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0.183546752161682,2.34717403304412,0,0.219686182734472,0.194429899074283,1.53985063787899,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0.338844532069132,0,0,0.988866362566974,0.7104801149461,8.98800331555214,12.2949857702897,0,0,0,28.2794474559766,31.8050698970323,0,0,0,48.450987639731,48.265813796201,38.0944202475484,0.263772575460388,0.274462930807229,0,82.3589847054074,30.9519435517424,39.2691496786402,18.5616008848411,15.6608848879013,1.1183966749518,4.16494063332512,8.91744409260069,0.289864488701678,0,0,0.539703191637817,0,0,4.0728881838208,3.40860645156115,5.71529210126311,4.94675404314476,7.74638808771743,3.84979432242953,5.09610479413291,0,0,0,0,1.37020655662872,0,0.593768556259299,0.520455980298408,1.52232739156071,1.38369298353635,1.3565037649736,0.23517741427141,1.50799909595611,0,8.09756398751505,0,4.85300549842228,1.76673214768315,0,0,84.3208695393256,49.4294228079754,0,0,0,0,41.4920071151359,43.4625572677695,0.502617408451458,23.9877561865342,18.6672283851141,66.0765981699401,23.8494656709604,0.712875546952214,1.7416975885413,0.505445516867349,5.26104639716185,0.260240885925407,0,0.180062129805349,1.05493372485001,0.884474488967262,1.15302348256365,1.78033276663485,7.24369438069244,0,0.378212160335639,0.175951124163949,3.28793598641362,1.66828349535359,1.74126083261083,5.35033554660653,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0.116765342367169,0.329119699826961,0.492502392237286,0.486412857275134,0.292399974850665,0.878200461164203,0.268412837520744,24.1833440848746,0.514523061896422,0,0,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0.951128130562796,0,0.823494773620054,3.2673577144035,3.58121649674071,2.9244613067868,0.898819408654221,0,0.199141273254367,0,0.342745537829186,0,0,0,0.140271639780637,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0.241177159752417,0,0,0.486405680325106,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0,0.469380496577004,0.502518772325447,0.476087281772027,0,0.472905432318573,1.55025282754142,1.11618338060241,0.327726629431476,0.518054945597687,0,0,0,0,0.275936746304732,109.81660355165,80.6416403754358,0.163934945376675,3.53459298086122,6.62567260774139,8.19921363022941,10.5557464889071,13.3822526853429,16.7099005561796,19.5322806244294,8.09621403349789,8.76767573733936,11.0680577825027,33.0960955914461,0.425820255624806,0.712262414669021,0.81443479676788,0,0,0.971122544619926,2.41858845571801,1.88605079755898,2.06711325016541,2.15204603560749,2.58428293168221,1.81766864738753,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0.540183282093931,0.258717367565509,1.07168517515796,1.59606210278046,2.67553226403106,5.75921572107423,1.8267896946876,0,0,1.54369878638473,1.31909002353184,0.322928853391811,1.26657142349127,0.716234064018819,1.14898629821543,0.291480836629851,160.949162145122,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0.406638934253697,0.432021363287205,0.836353184057875,0.436725127492355,1.34864346384821,0.661227645802687,1.04702376793612,0.129614973291793,0.621339313086926,0.56369293868419,0.448549638131936,0,0.583353565032143,0.258319646955462,2.36538575687089,1.5256441023948,3.6457227756306,2.41176492179135,0.966336483304024,0.288030006257865,0.316011120628178,0.202725215290164,0.821687657318618,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0.201932899896295,0.304827226619999,0,0,0.0962118416403295,0,1.36038230169127,0,0,0,1.54551675225752,0,0.183151624267265,0.214368379079066,0,18.6368108063632,13.3494318587081,15.4681788628637,13.0608418581203,22.6077231524312,22.661816921691,20.925697507186,24.3173449741079,19.0319811773366,15.0150490408028,0,0.798049746802062,0.512200817262403,3.16038732188782,1.25767897576789,1.47074806760011,2.889207461421,2.67845574410562,2.88827288632634,2.27427490587418,2.5347929989024,1.13175804831646,1.96647165686753,1.98477972455095,1.7230640686684,0,1.73826488917283,1.92909220463705,1.64834360321323,1.61918812147837,3.42869252385415,2.12970967391205,1.1921809497366,3.0522747492789,1.03520318456864,2.79228206042532,2.92684756596436,3.15683653725411,2.44447404922551,1.12228454331548,1.18635018124174,0.985044823755635,3.6830793885272,1.70430525304563,1.73615949883027,1.99848462350357,2.10538447600868,2.36358159453128,4.01705497344571,4.19123696327079,11.3615239454007 | |phase1_expression=3.84357233051505,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.39876624314307,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.608261587317087,0.183546752161682,2.34717403304412,0,0.219686182734472,0.194429899074283,1.53985063787899,0,0,0,0,0,0,0,0.404632921719196,0,0.633831403506179,0.338844532069132,0,0,0.988866362566974,0.7104801149461,8.98800331555214,12.2949857702897,0,0,0,28.2794474559766,31.8050698970323,0,0,0,48.450987639731,48.265813796201,38.0944202475484,0.263772575460388,0.274462930807229,0,82.3589847054074,30.9519435517424,39.2691496786402,18.5616008848411,15.6608848879013,1.1183966749518,4.16494063332512,8.91744409260069,0.289864488701678,0,0,0.539703191637817,0,0,4.0728881838208,3.40860645156115,5.71529210126311,4.94675404314476,7.74638808771743,3.84979432242953,5.09610479413291,0,0,0,0,1.37020655662872,0,0.593768556259299,0.520455980298408,1.52232739156071,1.38369298353635,1.3565037649736,0.23517741427141,1.50799909595611,0,8.09756398751505,0,4.85300549842228,1.76673214768315,0,0,84.3208695393256,49.4294228079754,0,0,0,0,41.4920071151359,43.4625572677695,0.502617408451458,23.9877561865342,18.6672283851141,66.0765981699401,23.8494656709604,0.712875546952214,1.7416975885413,0.505445516867349,5.26104639716185,0.260240885925407,0,0.180062129805349,1.05493372485001,0.884474488967262,1.15302348256365,1.78033276663485,7.24369438069244,0,0.378212160335639,0.175951124163949,3.28793598641362,1.66828349535359,1.74126083261083,5.35033554660653,0.199034266818493,0,0,0,0,0.234526059981096,0.180062061461015,0,0,0.154267112887378,0.465067889500816,0.268273401399619,0.116765342367169,0.329119699826961,0.492502392237286,0.486412857275134,0.292399974850665,0.878200461164203,0.268412837520744,24.1833440848746,0.514523061896422,0,0,0,0,0.257734922644187,0.201683524623343,0.444756087689741,0.951128130562796,0,0.823494773620054,3.2673577144035,3.58121649674071,2.9244613067868,0.898819408654221,0,0.199141273254367,0,0.342745537829186,0,0,0,0.140271639780637,0.189709611372772,0.147610147979602,0,0,0,0,0,0,0,0.241177159752417,0,0,0.486405680325106,0,0,0,0.312037673114561,0,0,0,0.184753190166605,0.37898282354097,0.325929952884052,0,0.469380496577004,0.502518772325447,0.476087281772027,0,0.472905432318573,1.55025282754142,1.11618338060241,0.327726629431476,0.518054945597687,0,0,0,0,0.275936746304732,109.81660355165,80.6416403754358,0.163934945376675,3.53459298086122,6.62567260774139,8.19921363022941,10.5557464889071,13.3822526853429,16.7099005561796,19.5322806244294,8.09621403349789,8.76767573733936,11.0680577825027,33.0960955914461,0.425820255624806,0.712262414669021,0.81443479676788,0,0,0.971122544619926,2.41858845571801,1.88605079755898,2.06711325016541,2.15204603560749,2.58428293168221,1.81766864738753,0.712994756769443,0.632073515871632,0,0,0.340439605753788,0.540183282093931,0.258717367565509,1.07168517515796,1.59606210278046,2.67553226403106,5.75921572107423,1.8267896946876,0,0,1.54369878638473,1.31909002353184,0.322928853391811,1.26657142349127,0.716234064018819,1.14898629821543,0.291480836629851,160.949162145122,0.170870880797853,0.206386867963223,0,0,0,0,0,0,0,0,0,0.406638934253697,0.432021363287205,0.836353184057875,0.436725127492355,1.34864346384821,0.661227645802687,1.04702376793612,0.129614973291793,0.621339313086926,0.56369293868419,0.448549638131936,0,0.583353565032143,0.258319646955462,2.36538575687089,1.5256441023948,3.6457227756306,2.41176492179135,0.966336483304024,0.288030006257865,0.316011120628178,0.202725215290164,0.821687657318618,0.25984164595559,0.179026695667481,0.198681354781265,0,0,0.201932899896295,0.304827226619999,0,0,0.0962118416403295,0,1.36038230169127,0,0,0,1.54551675225752,0,0.183151624267265,0.214368379079066,0,18.6368108063632,13.3494318587081,15.4681788628637,13.0608418581203,22.6077231524312,22.661816921691,20.925697507186,24.3173449741079,19.0319811773366,15.0150490408028,0,0.798049746802062,0.512200817262403,3.16038732188782,1.25767897576789,1.47074806760011,2.889207461421,2.67845574410562,2.88827288632634,2.27427490587418,2.5347929989024,1.13175804831646,1.96647165686753,1.98477972455095,1.7230640686684,0,1.73826488917283,1.92909220463705,1.64834360321323,1.61918812147837,3.42869252385415,2.12970967391205,1.1921809497366,3.0522747492789,1.03520318456864,2.79228206042532,2.92684756596436,3.15683653725411,2.44447404922551,1.12228454331548,1.18635018124174,0.985044823755635,3.6830793885272,1.70430525304563,1.73615949883027,1.99848462350357,2.10538447600868,2.36358159453128,4.01705497344571,4.19123696327079,11.3615239454007 | ||
|short_description=p2@S100b | |short_description=p2@S100b | ||
}} | }} |
Latest revision as of 07:29, 26 September 2015
Short description: | p2@S100b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_S100b_5end |
Coexpression cluster: | MCL_coexpression_mm9:20 |
Association with transcript: | 0bp_to_ENSMUST00000036387_5end |
EntrezGene: | S100b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ectodermal cell | 6.27e-08 | 44 |
neurectodermal cell | 6.27e-08 | 44 |
neural cell | 1.78e-07 | 43 |
autonomic neuron | 5.02e-07 | 9 |
neuron | 8.59e-07 | 33 |
neuronal stem cell | 8.59e-07 | 33 |
neuroblast | 8.59e-07 | 33 |
electrically signaling cell | 8.59e-07 | 33 |
Ontology term | p-value | n |
---|---|---|
nervous system | 2.64e-21 | 75 |
central nervous system | 3.99e-20 | 73 |
ectoderm-derived structure | 3.04e-19 | 95 |
ectoderm | 3.04e-19 | 95 |
presumptive ectoderm | 3.04e-19 | 95 |
regional part of nervous system | 2.38e-13 | 54 |
neurectoderm | 3.53e-13 | 64 |
neural plate | 3.53e-13 | 64 |
presumptive neural plate | 3.53e-13 | 64 |
ecto-epithelium | 7.32e-13 | 73 |
neural tube | 5.53e-12 | 52 |
neural rod | 5.53e-12 | 52 |
future spinal cord | 5.53e-12 | 52 |
neural keel | 5.53e-12 | 52 |
brain | 2.18e-09 | 47 |
future brain | 2.18e-09 | 47 |
regional part of brain | 8.94e-09 | 46 |
occipital lobe | 1.54e-08 | 10 |
visual cortex | 1.54e-08 | 10 |
neocortex | 1.54e-08 | 10 |
peripheral nervous system | 4.42e-08 | 11 |
posterior neural tube | 6.86e-08 | 12 |
chordal neural plate | 6.86e-08 | 12 |
structure with developmental contribution from neural crest | 8.35e-08 | 92 |
autonomic nervous system | 5.02e-07 | 9 |
gray matter | 7.62e-07 | 34 |