FFCP PHASE1:Mm9::chr9:119311199..119311271,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=11481 | |EntrezGene=11481 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=3505 | |||
|TSSclassifier=NA | |||
|UniProt=P27040 | |UniProt=P27040 | ||
|association_with_transcript=-290bp_to_ENSMUST00000035093,ENSMUST00000111699_5end | |association_with_transcript=-290bp_to_ENSMUST00000035093,ENSMUST00000111699_5end | ||
|cluster_id=chr9:119311199..119311271,+ | |||
|description=CAGE_peak_1_at_Acvr2b_5end | |description=CAGE_peak_1_at_Acvr2b_5end | ||
|id=chr9:119311199..119311271,+ | |id=chr9:119311199..119311271,+ | ||
|ontology_enrichment_celltype=CL:0000117!3.45e-12!23;CL:0000337!3.45e-12!23;CL:0000540!1.95e-10!33;CL:0000047!1.95e-10!33;CL:0000031!1.95e-10!33;CL:0000404!1.95e-10!33 | |ontology_enrichment_celltype=CL:0000117!3.45e-12!23;CL:0000337!3.45e-12!23;CL:0000540!1.95e-10!33;CL:0000047!1.95e-10!33;CL:0000031!1.95e-10!33;CL:0000404!1.95e-10!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,3.09e-12,23;CL:0000337,3.09e-12,23;CL:0000540,1.77e-10,33;CL:0000047,1.77e-10,33;CL:0000031,1.77e-10,33;CL:0000404,1.77e-10,33 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!5.78e-13!49;UBERON:0000033!7.88e-12!63;UBERON:0002346!1.31e-11!71;UBERON:0003075!1.31e-11!71;UBERON:0007284!1.31e-11!71;UBERON:0001017!9.48e-11!73;UBERON:0005743!9.48e-11!73;UBERON:0004121!4.55e-10!102;UBERON:0000924!4.55e-10!102;UBERON:0006601!4.55e-10!102;UBERON:0000073!5.72e-10!75;UBERON:0001016!5.72e-10!75;UBERON:0001049!1.06e-09!52;UBERON:0005068!1.06e-09!52;UBERON:0006241!1.06e-09!52;UBERON:0007135!1.06e-09!52;UBERON:0000955!1.25e-09!50;UBERON:0006238!1.25e-09!50;UBERON:0003080!1.96e-09!40;UBERON:0002616!2.77e-09!49;UBERON:0002780!2.90e-09!39;UBERON:0001890!2.90e-09!39;UBERON:0006240!2.90e-09!39;UBERON:0000153!7.24e-08!94;UBERON:0002020!5.42e-07!34;UBERON:0007811!7.26e-07!86 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,3.13e-13,64;UBERON:0003075,3.13e-13,64;UBERON:0007284,3.13e-13,64;UBERON:0003056,6.01e-13,49;UBERON:0010371,3.06e-11,73;UBERON:0004121,4.79e-11,95;UBERON:0000924,4.79e-11,95;UBERON:0006601,4.79e-11,95;UBERON:0000073,7.21e-11,54;UBERON:0001017,9.31e-11,73;UBERON:0001016,6.39e-10,75;UBERON:0001049,1.06e-09,52;UBERON:0005068,1.06e-09,52;UBERON:0006241,1.06e-09,52;UBERON:0007135,1.06e-09,52;UBERON:0003080,2.08e-09,40;UBERON:0002780,3.09e-09,39;UBERON:0001890,3.09e-09,39;UBERON:0006240,3.09e-09,39;UBERON:0000955,1.20e-08,47;UBERON:0006238,1.20e-08,47;UBERON:0002616,2.62e-08,46;UBERON:0010314,5.52e-08,92;UBERON:0002020,5.82e-07,34 | |||
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| ||
|short_description=p1@Acvr2b | |short_description=p1@Acvr2b | ||
}} | }} |
Latest revision as of 07:51, 26 September 2015
Short description: | p1@Acvr2b |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Acvr2b_5end |
Coexpression cluster: | MCL_coexpression_mm9:3505 |
Association with transcript: | -290bp_to_ENSMUST00000035093, ENSMUST00000111699_5end |
EntrezGene: | Acvr2b |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 3.09e-12 | 23 |
neuroblast (sensu Vertebrata) | 3.09e-12 | 23 |
neuron | 1.77e-10 | 33 |
neuronal stem cell | 1.77e-10 | 33 |
neuroblast | 1.77e-10 | 33 |
electrically signaling cell | 1.77e-10 | 33 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 3.13e-13 | 64 |
neural plate | 3.13e-13 | 64 |
presumptive neural plate | 3.13e-13 | 64 |
pre-chordal neural plate | 6.01e-13 | 49 |
ecto-epithelium | 3.06e-11 | 73 |
ectoderm-derived structure | 4.79e-11 | 95 |
ectoderm | 4.79e-11 | 95 |
presumptive ectoderm | 4.79e-11 | 95 |
regional part of nervous system | 7.21e-11 | 54 |
central nervous system | 9.31e-11 | 73 |
nervous system | 6.39e-10 | 75 |
neural tube | 1.06e-09 | 52 |
neural rod | 1.06e-09 | 52 |
future spinal cord | 1.06e-09 | 52 |
neural keel | 1.06e-09 | 52 |
anterior neural tube | 2.08e-09 | 40 |
regional part of forebrain | 3.09e-09 | 39 |
forebrain | 3.09e-09 | 39 |
future forebrain | 3.09e-09 | 39 |
brain | 1.20e-08 | 47 |
future brain | 1.20e-08 | 47 |
regional part of brain | 2.62e-08 | 46 |
structure with developmental contribution from neural crest | 5.52e-08 | 92 |
gray matter | 5.82e-07 | 34 |