FFCP PHASE1:Mm9::chr10:77068962..77068985,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:77068962..77068985,+
|short_description=p1@Sumo3
|description=CAGE_peak_1_at_Sumo3_5end
|association_with_transcript=0bp_to_ENSMUST00000129492,ENSMUST0000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20610 | |EntrezGene=20610 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=G3UZA7,G3UWX9,Q9Z172,D3Z794 | |UniProt=G3UZA7,G3UWX9,Q9Z172,D3Z794 | ||
|association_with_transcript=0bp_to_ENSMUST00000129492,ENSMUST00000141228,NM_019929,uc007fvy.1_5end | |||
|cluster_id=chr10:77068962..77068985,+ | |||
|description=CAGE_peak_1_at_Sumo3_5end | |||
|id=chr10:77068962..77068985,+ | |||
|ontology_enrichment_celltype=CL:0000117!8.23e-12!23;CL:0000337!8.23e-12!23;CL:0000221!3.44e-09!44;CL:0000133!3.44e-09!44;CL:0002319!6.25e-09!43;CL:0000540!8.87e-09!33;CL:0000047!8.87e-09!33;CL:0000031!8.87e-09!33;CL:0000404!8.87e-09!33;CL:0000055!6.57e-08!50;CL:0000393!3.02e-07!39;CL:0000211!3.02e-07!39;CL:0002321!7.04e-07!70;CL:0000220!7.04e-07!70 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,8.23e-12,23;CL:0000337,8.23e-12,23;CL:0000221,3.44e-09,44;CL:0000133,3.44e-09,44;CL:0002319,6.25e-09,43;CL:0000540,8.87e-09,33;CL:0000047,8.87e-09,33;CL:0000031,8.87e-09,33;CL:0000404,8.87e-09,33;CL:0000393,3.02e-07,39;CL:0000211,3.02e-07,39;CL:0002321,7.04e-07,70 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.47e-07!73;UBERON:0005743!1.47e-07!73;UBERON:0000073!3.40e-07!75;UBERON:0001016!3.40e-07!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,1.47e-07,73;UBERON:0001016,3.40e-07,75;UBERON:0000073,9.03e-07,54 | |||
|phase1_expression=56.0520964866779,26.5221309805914,32.7599452360466,51.7213801334679,31.5564309866199,37.1013190925276,26.6318410278899,13.0414556675992,15.0643932702283,8.19225842126977,9.58820622062828,12.3646846442771,11.9840510951844,10.1407666806037,24.9832321361747,21.8673288781012,42.6732745658169,17.5081501773822,17.6877619351403,18.2487550273153,29.5950649725723,21.5461364105921,31.0827749075333,26.0787649153253,22.7115188256498,41.3447014162815,37.9070556619986,30.1659725760245,26.7933021433487,41.3329412806286,28.6032358745343,53.9776072440687,38.7490816178279,15.8481681015439,67.5912790217983,71.8133667948687,68.8050730604184,27.204555997899,33.5974198145234,45.5465657257204,27.0586484494267,38.9335926426314,33.9857247121808,24.6757763232131,20.4781401063419,35.7916166715279,36.7723931843578,46.0033079962742,49.8687634807251,34.997381833371,50.1151389418798,35.9381410912429,25.6707387268337,20.3101399763176,22.5182845425451,46.5639579225064,40.1146815914259,36.097046459421,53.0069127452146,62.4209355540999,60.213983333087,50.8266798103698,64.9185201161132,60.2932810578537,57.3542490288845,58.2593694255802,49.1344181250184,47.6430698598728,59.3104582404492,51.9772862577009,60.573588869198,80.8392285862764,60.5179802207421,52.6710436624302,70.9256485534949,53.3146896233812,40.7428759697738,53.756369333864,54.3767127727102,50.2486756252039,77.5815217748434,58.3422975023571,55.8365998002762,68.0942758138333,56.9937464207502,58.6310885092599,55.0978404692528,47.5318586854516,27.6400605666122,36.2743488512571,37.1026545538148,49.044160987939,38.078394687634,74.4790404460188,31.8390444549358,25.5375325645481,31.0382168491172,21.8150812899914,24.6796704372725,32.153901280441,48.3092929834014,6.41632387071589,5.09610479413291,7.11066703153331,45.6796096533662,48.6450941712189,51.0579689464931,42.3622193757712,21.4918443427153,23.6023001113071,44.2387583253646,34.1001335709598,33.9004780966406,39.4893318247871,36.2173217977971,25.7616512225835,41.0343646439061,17.930320258069,25.6537060065464,32.8386705393241,24.5134085491037,23.7588874036259,20.5030937339934,24.8863677459815,41.889341362691,27.0784478521107,71.2899990810226,92.3850205729848,69.8886248901856,32.5045687508465,40.7175536508578,62.073249943755,36.8507558807626,40.6587577155226,36.5706958424826,36.3420429271777,63.8532811341483,26.1254638281195,30.5794537704746,26.3052319858092,58.0337175613659,55.1765050640335,49.1569614368603,39.9367767264645,43.6794324551525,40.4839356100125,37.2932863747721,21.2136764005993,42.2513266148371,36.6865795525569,40.1168563093803,38.140057442398,42.2631818822909,32.7357036530837,39.3043880539172,46.3749841687089,56.1770549850588,55.8444958438932,73.3141828440629,31.4831174253963,27.2050229578072,27.9096195264573,30.7768156260773,30.695220152595,33.7844977223358,23.7184623645416,29.7783475553577,27.9069168257535,29.6207729844265,23.6401148273897,16.7001747664463,20.0293982772705,17.344459107993,20.8019949078576,29.2303028504137,45.6896478964023,26.4335026387038,28.8251117663263,51.6157566295266,46.4473343720877,40.4643828551373,40.7400719739152,32.0224383136613,39.5669302314123,48.8764933390847,42.8217282282428,49.2617009248528,48.3464227059997,39.5777096851814,33.2563181202062,39.553263127069,42.6162324764346,51.020665356379,41.700707102551,40.574784842309,36.4535876843113,39.1784024078604,48.0430366248682,34.7800954183415,25.241335304512,31.5567442961163,33.5640285867297,30.8310732170635,26.1946815974268,28.8941722816408,28.1077640481067,28.6032771157789,27.7353733715279,28.0088436959562,29.0573098825319,32.7513158085571,40.360527738648,47.443508154027,42.7962089818779,51.4862160639025,46.9796712981628,39.6468283883426,53.0687873499704,25.3111870528248,57.2264063546864,44.000543639347,37.3439188705414,52.1012351200475,38.0239204392922,29.9934987516377,30.2457154179588,24.4334473364596,31.6694506197748,29.8180417389501,22.7770007454876,29.5291318990681,33.7032306494922,82.9352061665997,67.9882104773387,24.5882136509518,23.730560182207,29.5413085577537,31.0610969469338,3.27869890753351,31.3063949733423,34.7059041357882,32.7968545209176,38.3453647964382,34.1725381072149,31.4146130456176,41.8953265567472,32.7896668356664,27.4720506436633,31.2277344577754,34.7027021735552,26.968616189571,61.0765020578685,75.7424360994129,34.4787557012599,26.5490276679926,49.2844691394612,58.3484464941969,41.8703277058094,44.2952839321159,35.3550420135517,43.9328098385976,49.4405872089407,44.2056749197054,36.028190404683,39.0048851727495,29.9093075419742,33.703520969625,54.9186336795496,58.3407663860223,50.3692032324242,43.6256974759993,42.8085162244969,41.1372551505302,47.8009970109921,26.5179030111993,32.4103068421645,21.3912546113313,26.7115729765198,39.5587845404969,31.9055372869944,29.8430860007841,24.7852758615042,38.4754704351403,35.7870832880284,21.1879892189337,47.6753664995044,27.9643736328265,19.2135826144785,21.460993752201,18.7598102029349,53.7131838780583,57.6599983573471,52.9305899670943,32.4588010125139,57.41498283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|phase1_expression=56.0520964866779,26.5221309805914,32.7599452360466,51.7213801334679,31.5564309866199,37.1013190925276,26.6318410278899,13.0414556675992,15.0643932702283,8.19225842126977,9.58820622062828,12.3646846442771,11.9840510951844,10.1407666806037,24.9832321361747,21.8673288781012,42.6732745658169,17.5081501773822,17.6877619351403,18.2487550273153,29.5950649725723,21.5461364105921,31.0827749075333,26.0787649153253,22.7115188256498,41.3447014162815,37.9070556619986,30.1659725760245,26.7933021433487,41.3329412806286,28.6032358745343,53.9776072440687,38.7490816178279,15.8481681015439,67.5912790217983,71.8133667948687,68.8050730604184,27.204555997899,33.5974198145234,45.5465657257204,27.0586484494267,38.9335926426314,33.9857247121808,24.6757763232131,20.4781401063419,35.7916166715279,36.7723931843578,46.0033079962742,49.8687634807251,34.997381833371,50.1151389418798,35.9381410912429,25.6707387268337,20.3101399763176,22.5182845425451,46.5639579225064,40.1146815914259,36.097046459421,53.0069127452146,62.4209355540999,60.213983333087,50.8266798103698,64.9185201161132,60.2932810578537,57.3542490288845,58.2593694255802,49.1344181250184,47.6430698598728,59.3104582404492,51.9772862577009,60.573588869198,80.8392285862764,60.5179802207421,52.6710436624302,70.9256485534949,53.3146896233812,40.7428759697738,53.756369333864,54.3767127727102,50.2486756252039,77.5815217748434,58.3422975023571,55.8365998002762,68.0942758138333,56.9937464207502,58.6310885092599,55.0978404692528,47.5318586854516,27.6400605666122,36.2743488512571,37.1026545538148,49.044160987939,38.078394687634,74.4790404460188,31.8390444549358,25.5375325645481,31.0382168491172,21.8150812899914,24.6796704372725,32.153901280441,48.3092929834014,6.41632387071589,5.09610479413291,7.11066703153331,45.6796096533662,48.6450941712189,51.0579689464931,42.3622193757712,21.4918443427153,23.6023001113071,44.2387583253646,34.1001335709598,33.9004780966406,39.4893318247871,36.2173217977971,25.7616512225835,41.0343646439061,17.930320258069,25.6537060065464,32.8386705393241,24.5134085491037,23.7588874036259,20.5030937339934,24.8863677459815,41.889341362691,27.0784478521107,71.2899990810226,92.3850205729848,69.8886248901856,32.5045687508465,40.7175536508578,62.073249943755,36.8507558807626,40.6587577155226,36.5706958424826,36.3420429271777,63.8532811341483,26.1254638281195,30.5794537704746,26.3052319858092,58.0337175613659,55.1765050640335,49.1569614368603,39.9367767264645,43.6794324551525,40.4839356100125,37.2932863747721,21.2136764005993,42.2513266148371,36.6865795525569,40.1168563093803,38.140057442398,42.2631818822909,32.7357036530837,39.3043880539172,46.3749841687089,56.1770549850588,55.8444958438932,73.3141828440629,31.4831174253963,27.2050229578072,27.9096195264573,30.7768156260773,30.695220152595,33.7844977223358,23.7184623645416,29.7783475553577,27.9069168257535,29.6207729844265,23.6401148273897,16.7001747664463,20.0293982772705,17.344459107993,20.8019949078576,29.2303028504137,45.6896478964023,26.4335026387038,28.8251117663263,51.6157566295266,46.4473343720877,40.4643828551373,40.7400719739152,32.0224383136613,39.5669302314123,48.8764933390847,42.8217282282428,49.2617009248528,48.3464227059997,39.5777096851814,33.2563181202062,39.553263127069,42.6162324764346,51.020665356379,41.700707102551,40.574784842309,36.4535876843113,39.1784024078604,48.0430366248682,34.7800954183415,25.241335304512,31.5567442961163,33.5640285867297,30.8310732170635,26.1946815974268,28.8941722816408,28.1077640481067,28.6032771157789,27.7353733715279,28.0088436959562,29.0573098825319,32.7513158085571,40.360527738648,47.443508154027,42.7962089818779,51.4862160639025,46.9796712981628,39.6468283883426,53.0687873499704,25.3111870528248,57.2264063546864,44.000543639347,37.3439188705414,52.1012351200475,38.0239204392922,29.9934987516377,30.2457154179588,24.4334473364596,31.6694506197748,29.8180417389501,22.7770007454876,29.5291318990681,33.7032306494922,82.9352061665997,67.9882104773387,24.5882136509518,23.730560182207,29.5413085577537,31.0610969469338,3.27869890753351,31.3063949733423,34.7059041357882,32.7968545209176,38.3453647964382,34.1725381072149,31.4146130456176,41.8953265567472,32.7896668356664,27.4720506436633,31.2277344577754,34.7027021735552,26.968616189571,61.0765020578685,75.7424360994129,34.4787557012599,26.5490276679926,49.2844691394612,58.3484464941969,41.8703277058094,44.2952839321159,35.3550420135517,43.9328098385976,49.4405872089407,44.2056749197054,36.028190404683,39.0048851727495,29.9093075419742,33.703520969625,54.9186336795496,58.3407663860223,50.3692032324242,43.6256974759993,42.8085162244969,41.1372551505302,47.8009970109921,26.5179030111993,32.4103068421645,21.3912546113313,26.7115729765198,39.5587845404969,31.9055372869944,29.8430860007841,24.7852758615042,38.4754704351403,35.7870832880284,21.1879892189337,47.6753664995044,27.9643736328265,19.2135826144785,21.460993752201,18.7598102029349,53.7131838780583,57.6599983573471,52.9305899670943,32.4588010125139,57.41498283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| ||
|short_description=p1@Sumo3 | |||
}} | }} |
Latest revision as of 08:11, 26 September 2015
Short description: | p1@Sumo3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Sumo3_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000129492, ENSMUST00000141228, NM_019929, uc007fvy.1_5end |
EntrezGene: | Sumo3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 8.23e-12 | 23 |
neuroblast (sensu Vertebrata) | 8.23e-12 | 23 |
ectodermal cell | 3.44e-09 | 44 |
neurectodermal cell | 3.44e-09 | 44 |
neural cell | 6.25e-09 | 43 |
neuron | 8.87e-09 | 33 |
neuronal stem cell | 8.87e-09 | 33 |
neuroblast | 8.87e-09 | 33 |
electrically signaling cell | 8.87e-09 | 33 |
electrically responsive cell | 3.02e-07 | 39 |
electrically active cell | 3.02e-07 | 39 |
embryonic cell | 7.04e-07 | 70 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 1.47e-07 | 73 |
nervous system | 3.40e-07 | 75 |
regional part of nervous system | 9.03e-07 | 54 |