FFCP PHASE1:Mm9::chr10:77068989..77069000,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr10:77068989..77069000,+
|short_description=p2@Sumo3
|description=CAGE_peak_2_at_Sumo3_5end
|association_with_transcript=10bp_to_NM_019929,uc007fvy.1_5end
|E...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=20610 | |EntrezGene=20610 | ||
|HGNC= | |HGNC= | ||
|TSSclassifier=NA | |||
|UniProt=Q9Z172,D3Z794 | |UniProt=Q9Z172,D3Z794 | ||
|association_with_transcript=10bp_to_NM_019929,uc007fvy.1_5end | |||
|cluster_id=chr10:77068989..77069000,+ | |||
|description=CAGE_peak_2_at_Sumo3_5end | |||
|id=chr10:77068989..77069000,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!7.22e-12!73;UBERON:0005743!7.22e-12!73;UBERON:0000073!2.08e-11!75;UBERON:0001016!2.08e-11!75;UBERON:0002346!1.07e-10!71;UBERON:0003075!1.07e-10!71;UBERON:0007284!1.07e-10!71;UBERON:0001049!2.69e-10!52;UBERON:0005068!2.69e-10!52;UBERON:0006241!2.69e-10!52;UBERON:0007135!2.69e-10!52;UBERON:0000955!2.70e-09!50;UBERON:0006238!2.70e-09!50;UBERON:0000033!4.81e-09!63;UBERON:0002616!8.96e-09!49;UBERON:0003056!1.36e-08!49;UBERON:0004121!1.88e-08!102;UBERON:0000924!1.88e-08!102;UBERON:0006601!1.88e-08!102;UBERON:0003080!8.70e-08!40;UBERON:0002020!1.84e-07!34;UBERON:0002780!2.28e-07!39;UBERON:0001890!2.28e-07!39;UBERON:0006240!2.28e-07!39 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,5.07e-12,64;UBERON:0003075,5.07e-12,64;UBERON:0007284,5.07e-12,64;UBERON:0001017,7.22e-12,73;UBERON:0001016,2.08e-11,75;UBERON:0000073,8.59e-11,54;UBERON:0001049,2.69e-10,52;UBERON:0005068,2.69e-10,52;UBERON:0006241,2.69e-10,52;UBERON:0007135,2.69e-10,52;UBERON:0010371,1.94e-09,73;UBERON:0004121,3.54e-09,95;UBERON:0000924,3.54e-09,95;UBERON:0006601,3.54e-09,95;UBERON:0003056,1.36e-08,49;UBERON:0000955,2.51e-08,47;UBERON:0006238,2.51e-08,47;UBERON:0002616,8.01e-08,46;UBERON:0003080,8.70e-08,40;UBERON:0002020,1.84e-07,34;UBERON:0002780,2.28e-07,39;UBERON:0001890,2.28e-07,39;UBERON:0006240,2.28e-07,39 | |||
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| ||
|short_description=p2@Sumo3 | |||
}} | }} |
Latest revision as of 08:11, 26 September 2015
Short description: | p2@Sumo3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Sumo3_5end |
Coexpression cluster: | NA |
Association with transcript: | 10bp_to_NM_019929, uc007fvy.1_5end |
EntrezGene: | Sumo3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectoderm | 5.07e-12 | 64 |
neural plate | 5.07e-12 | 64 |
presumptive neural plate | 5.07e-12 | 64 |
central nervous system | 7.22e-12 | 73 |
nervous system | 2.08e-11 | 75 |
regional part of nervous system | 8.59e-11 | 54 |
neural tube | 2.69e-10 | 52 |
neural rod | 2.69e-10 | 52 |
future spinal cord | 2.69e-10 | 52 |
neural keel | 2.69e-10 | 52 |
ecto-epithelium | 1.94e-09 | 73 |
ectoderm-derived structure | 3.54e-09 | 95 |
ectoderm | 3.54e-09 | 95 |
presumptive ectoderm | 3.54e-09 | 95 |
pre-chordal neural plate | 1.36e-08 | 49 |
brain | 2.51e-08 | 47 |
future brain | 2.51e-08 | 47 |
regional part of brain | 8.01e-08 | 46 |
anterior neural tube | 8.70e-08 | 40 |
gray matter | 1.84e-07 | 34 |
regional part of forebrain | 2.28e-07 | 39 |
forebrain | 2.28e-07 | 39 |
future forebrain | 2.28e-07 | 39 |