FFCP PHASE1:Mm9::chr1:133423879..133423962,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:133423879..133423962,-
|short_description=p1@Srgap2
|description=CAGE_peak_1_at_Srgap2_5end
|association_with_transcript=0bp_to_ENSMUST00000097588,NM_00108...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=14270 | |EntrezGene=14270 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=52 | |||
|TSSclassifier=NA | |||
|UniProt=Q91Z67,Q3UPB8 | |UniProt=Q91Z67,Q3UPB8 | ||
|association_with_transcript=0bp_to_ENSMUST00000097588,NM_001081011,uc007cng.2,uc007cnj.1_5end | |||
|cluster_id=chr1:133423879..133423962,- | |||
|description=CAGE_peak_1_at_Srgap2_5end | |||
|id=chr1:133423879..133423962,- | |||
|ontology_enrichment_celltype=CL:0000540!1.70e-09!33;CL:0000047!1.70e-09!33;CL:0000031!1.70e-09!33;CL:0000404!1.70e-09!33;CL:0002319!3.60e-09!43;CL:0000221!4.95e-09!44;CL:0000133!4.95e-09!44;CL:0000393!1.80e-08!39;CL:0000211!1.80e-08!39;CL:0000117!2.39e-08!23;CL:0000337!2.39e-08!23;CL:0000055!2.77e-08!50 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.70e-09,33;CL:0000047,1.70e-09,33;CL:0000031,1.70e-09,33;CL:0000404,1.70e-09,33;CL:0002319,3.60e-09,43;CL:0000221,4.95e-09,44;CL:0000133,4.95e-09,44;CL:0000393,1.80e-08,39;CL:0000211,1.80e-08,39;CL:0000117,2.39e-08,23;CL:0000337,2.39e-08,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=12.1713123799643,1.04692622291808,0.909998478779072,0.90739263392049,2.50447864973174,4.70061961353291,5.37309073369709,13.4288256379239,4.22366166455,4.21316147379588,2.22583358693156,2.71225340584144,15.0656642339461,15.7356724354195,9.99329285446988,14.3757439846776,11.8925519281785,6.78243655520211,6.7186072466812,8.06340338416257,23.7270779521485,6.056748023254,6.52999472847338,4.31979541542198,2.06468352960453,1.14846392823004,2.15380998079537,3.44753972297422,3.80046838912748,1.51218077855958,3.32595765982957,8.89042942843484,11.6862309641068,15.8481681015439,6.93243887403059,3.15845826181135,6.32925004413344,18.8339233831608,11.720030167857,20.4174260149781,15.2940186888064,15.0270006690858,16.9928623560904,13.7227531593379,13.1790010585369,12.2976323948327,9.38869613217647,15.0437357902508,10.7646229539891,22.5538682926169,23.6577052546863,17.2503077237966,6.71130424230945,19.5847778343063,21.8460969442602,15.6928255981928,27.7937436740594,20.6268836910977,19.2200637816618,20.6306481916093,27.2547503507657,11.1818695582814,24.9002542911119,16.6481447697059,35.5991890524111,17.7620028736525,20.6724076257699,18.0582603501131,32.558538264862,31.1863717546205,27.9732198597338,25.7085885963423,25.1790136684839,24.1306874453459,40.4467887696957,44.122501757281,16.5173821499083,31.6664598451266,26.1131106535614,21.761237475482,31.8376999736386,27.6084086395083,18.7052609330925,15.757353080887,22.0029476798607,36.2393160132611,35.8776635613739,20.6903384866084,22.2635008399561,32.7980570863449,36.8127900651131,16.3480536626463,1.3599426674155,5.93673510801599,12.9955283489534,7.16843019355737,11.9377757111989,15.8500199997594,11.950156211732,14.1335829804136,16.9012103732017,29.5150898052931,196.200034574117,142.213340630666,8.44315059943735,9.37431502257865,6.57181778519218,13.35951392713,73.2794210721496,12.1722554033156,13.3583701609925,9.43842982767638,10.6083128737787,8.44046787094686,12.9347577849275,10.3046604890334,10.6293836125781,19.0871151134283,26.5383165584962,22.8091258425847,22.3049933644997,19.3950101254089,14.9113408974498,54.1644474471362,55.712824012379,6.13096932500619,7.78798309288482,5.39912457894067,8.51370521389534,20.0719456802462,16.9275223042892,23.3717094929928,19.8159725019195,11.7629110371952,18.4931359658008,18.0087802005211,17.5163705822544,16.1729061793121,17.6905930903572,11.1534183619831,16.1349349273753,10.8053989083732,21.2473313170312,21.4000841326715,20.4789862445497,19.3451717630123,20.8017828522598,13.7112786491678,19.4011193639558,24.7728965019843,22.8736461413134,16.8780713969233,16.9608822027615,32.3874514865615,29.01528123352,16.3208098791164,7.72434506044558,8.4924809347856,9.66155897945015,22.9909607514407,15.4787199587523,16.3856475929524,15.6251525486239,21.8408297239618,18.6663206593728,17.9051137457814,21.7301455133692,14.3621371111618,17.114224391002,14.4467368389604,13.8627664323413,10.0877991323479,12.0752563410078,13.1522290385164,18.5055154736432,19.8605901892019,5.94753809370836,4.7601101999438,18.3427895460301,20.9013004674395,17.912577123771,14.117846723634,12.4531704553127,6.65789691393957,7.59246498471219,6.42325923423642,9.55073793441024,4.37704238490532,6.04388670069272,4.49409704327111,8.21324589523838,5.97423819763102,10.4317345524195,18.6225075553858,20.2873924211545,18.9395734896142,20.752916126936,16.6221893140055,18.1488861546618,11.0707610984702,14.9148791449306,8.51440431060424,10.6722945751374,16.5176654658933,16.5109555895091,13.4917267430912,12.1716072833102,13.5059209461353,11.4581633301639,12.9463261852865,9.72811360650212,11.5315793538994,27.3159592401974,13.3970741160661,12.1694692514679,14.1444171650383,10.4050499842709,11.0962009913574,24.2026679118252,13.4538902357044,18.578007314391,20.3694102930226,19.7139808562342,21.9433197248779,19.0434912708811,23.8063050386515,18.7585821486367,20.1532867580385,27.9045845150602,26.7097202986653,28.4930220078728,29.3637588920468,48.2532108605671,59.8296252200581,7.37646409528554,8.82997588175144,16.215609588767,17.4645413022383,9.67216177722385,11.6136626514012,19.2460013843917,19.5219372148319,20.0343759891503,25.8086301788756,26.9586395639697,37.6491785949147,23.4790206971439,18.704374906324,19.7643888973262,14.7807805554031,15.4714692877013,16.738166744722,18.5691133663077,22.6009068472374,19.9117707509944,12.3818124439041,15.4185014052023,14.8998013007159,10.0402643579463,19.3684143204674,14.7304127105886,15.9954840970102,18.1813662976208,14.2216541071117,10.5418608574999,14.4389760547462,20.4263763452273,16.9257428389432,11.1248468053169,12.8602221018955,10.995094485821,13.5560301377574,14.973960874793,10.3518082698964,22.5284839741162,14.8282449604674,13.2317038832977,66.1193874295335,23.0894130175145,18.9985713523691,9.54978752025092,11.8181447816444,6.41257840585672,23.1781627513137,14.1822831062218,20.432299928359,21.852954229626,12.6206866193143,14.0795054552656,9.83746144788047,5.94924504978494,8.81694149639045,7.04819866402561,5.72802370809068,10.59725578496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|phase1_expression=12.1713123799643,1.04692622291808,0.909998478779072,0.90739263392049,2.50447864973174,4.70061961353291,5.37309073369709,13.4288256379239,4.22366166455,4.21316147379588,2.22583358693156,2.71225340584144,15.0656642339461,15.7356724354195,9.99329285446988,14.3757439846776,11.8925519281785,6.78243655520211,6.7186072466812,8.06340338416257,23.7270779521485,6.056748023254,6.52999472847338,4.31979541542198,2.06468352960453,1.14846392823004,2.15380998079537,3.44753972297422,3.80046838912748,1.51218077855958,3.32595765982957,8.89042942843484,11.6862309641068,15.8481681015439,6.93243887403059,3.15845826181135,6.32925004413344,18.8339233831608,11.720030167857,20.4174260149781,15.2940186888064,15.0270006690858,16.9928623560904,13.7227531593379,13.1790010585369,12.2976323948327,9.38869613217647,15.0437357902508,10.7646229539891,22.5538682926169,23.6577052546863,17.2503077237966,6.71130424230945,19.5847778343063,21.8460969442602,15.6928255981928,27.7937436740594,20.6268836910977,19.2200637816618,20.6306481916093,27.2547503507657,11.1818695582814,24.9002542911119,16.6481447697059,35.5991890524111,17.7620028736525,20.6724076257699,18.0582603501131,32.558538264862,31.1863717546205,27.9732198597338,25.7085885963423,25.1790136684839,24.1306874453459,40.4467887696957,44.122501757281,16.5173821499083,31.6664598451266,26.1131106535614,21.761237475482,31.8376999736386,27.6084086395083,18.7052609330925,15.757353080887,22.0029476798607,36.2393160132611,35.8776635613739,20.6903384866084,22.2635008399561,32.7980570863449,36.8127900651131,16.3480536626463,1.3599426674155,5.93673510801599,12.9955283489534,7.16843019355737,11.9377757111989,15.8500199997594,11.950156211732,14.1335829804136,16.9012103732017,29.5150898052931,196.200034574117,142.213340630666,8.44315059943735,9.37431502257865,6.57181778519218,13.35951392713,73.2794210721496,12.1722554033156,13.3583701609925,9.43842982767638,10.6083128737787,8.44046787094686,12.9347577849275,10.3046604890334,10.6293836125781,19.0871151134283,26.5383165584962,22.8091258425847,22.3049933644997,19.3950101254089,14.9113408974498,54.1644474471362,55.712824012379,6.13096932500619,7.78798309288482,5.39912457894067,8.51370521389534,20.0719456802462,16.9275223042892,23.3717094929928,19.8159725019195,11.7629110371952,18.4931359658008,18.0087802005211,17.5163705822544,16.1729061793121,17.6905930903572,11.1534183619831,16.1349349273753,10.8053989083732,21.2473313170312,21.4000841326715,20.4789862445497,19.3451717630123,20.8017828522598,13.7112786491678,19.4011193639558,24.7728965019843,22.8736461413134,16.8780713969233,16.9608822027615,32.3874514865615,29.01528123352,16.3208098791164,7.72434506044558,8.4924809347856,9.66155897945015,22.9909607514407,15.4787199587523,16.3856475929524,15.6251525486239,21.8408297239618,18.6663206593728,17.9051137457814,21.7301455133692,14.3621371111618,17.114224391002,14.4467368389604,13.8627664323413,10.0877991323479,12.0752563410078,13.1522290385164,18.5055154736432,19.8605901892019,5.94753809370836,4.7601101999438,18.3427895460301,20.9013004674395,17.912577123771,14.117846723634,12.4531704553127,6.65789691393957,7.59246498471219,6.42325923423642,9.55073793441024,4.37704238490532,6.04388670069272,4.49409704327111,8.21324589523838,5.97423819763102,10.4317345524195,18.6225075553858,20.2873924211545,18.9395734896142,20.752916126936,16.6221893140055,18.1488861546618,11.0707610984702,14.9148791449306,8.51440431060424,10.6722945751374,16.5176654658933,16.5109555895091,13.4917267430912,12.1716072833102,13.5059209461353,11.4581633301639,12.9463261852865,9.72811360650212,11.5315793538994,27.3159592401974,13.3970741160661,12.1694692514679,14.1444171650383,10.4050499842709,11.0962009913574,24.2026679118252,13.4538902357044,18.578007314391,20.3694102930226,19.7139808562342,21.9433197248779,19.0434912708811,23.8063050386515,18.7585821486367,20.1532867580385,27.9045845150602,26.7097202986653,28.4930220078728,29.3637588920468,48.2532108605671,59.8296252200581,7.37646409528554,8.82997588175144,16.215609588767,17.4645413022383,9.67216177722385,11.6136626514012,19.2460013843917,19.5219372148319,20.0343759891503,25.8086301788756,26.9586395639697,37.6491785949147,23.4790206971439,18.704374906324,19.7643888973262,14.7807805554031,15.4714692877013,16.738166744722,18.5691133663077,22.6009068472374,19.9117707509944,12.3818124439041,15.4185014052023,14.8998013007159,10.0402643579463,19.3684143204674,14.7304127105886,15.9954840970102,18.1813662976208,14.2216541071117,10.5418608574999,14.4389760547462,20.4263763452273,16.9257428389432,11.1248468053169,12.8602221018955,10.995094485821,13.5560301377574,14.973960874793,10.3518082698964,22.5284839741162,14.8282449604674,13.2317038832977,66.1193874295335,23.0894130175145,18.9985713523691,9.54978752025092,11.8181447816444,6.41257840585672,23.1781627513137,14.1822831062218,20.432299928359,21.852954229626,12.6206866193143,14.0795054552656,9.83746144788047,5.94924504978494,8.81694149639045,7.04819866402561,5.72802370809068,10.59725578496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| ||
|short_description=p1@Srgap2 | |||
}} | }} |
Latest revision as of 08:29, 26 September 2015
Short description: | p1@Srgap2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Srgap2_5end |
Coexpression cluster: | MCL_coexpression_mm9:52 |
Association with transcript: | 0bp_to_ENSMUST00000097588, NM_001081011, uc007cng.2, uc007cnj.1_5end |
EntrezGene: | Srgap2 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.70e-09 | 33 |
neuronal stem cell | 1.70e-09 | 33 |
neuroblast | 1.70e-09 | 33 |
electrically signaling cell | 1.70e-09 | 33 |
neural cell | 3.60e-09 | 43 |
ectodermal cell | 4.95e-09 | 44 |
neurectodermal cell | 4.95e-09 | 44 |
electrically responsive cell | 1.80e-08 | 39 |
electrically active cell | 1.80e-08 | 39 |
CNS neuron (sensu Vertebrata) | 2.39e-08 | 23 |
neuroblast (sensu Vertebrata) | 2.39e-08 | 23 |