FFCP PHASE1:Mm9::chr2:20658908..20658928,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=208618 | |EntrezGene=208618 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=195 | |||
|TSSclassifier=NA | |||
|UniProt=A2AQ25 | |UniProt=A2AQ25 | ||
|association_with_transcript=-12bp_to_ENSMUST00000114606,ENSMUST00000114608_5end | |association_with_transcript=-12bp_to_ENSMUST00000114606,ENSMUST00000114608_5end | ||
|cluster_id=chr2:20658908..20658928,+ | |||
|description=CAGE_peak_6_at_Etl4_5end | |description=CAGE_peak_6_at_Etl4_5end | ||
|id=chr2:20658908..20658928,+ | |id=chr2:20658908..20658928,+ | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,8.13e-08,9;CL:0002251,8.13e-08,9 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.50e-17!43;UBERON:0005409!4.74e-15!59;UBERON:0000344!2.71e-10!15;UBERON:0001242!4.20e-09!13;UBERON:0000060!4.20e-09!13;UBERON:0001262!4.20e-09!13;UBERON:0004786!4.20e-09!13;UBERON:0003133!1.35e-07!24;UBERON:0005156!1.52e-07!26;UBERON:0000990!1.52e-07!26;UBERON:0004119!9.29e-07!130;UBERON:0000925!9.29e-07!130;UBERON:0006595!9.29e-07!130 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.18e-23,31;UBERON:0005409,8.65e-21,47;UBERON:0000344,1.18e-12,15;UBERON:0001242,3.82e-11,13;UBERON:0001262,3.82e-11,13;UBERON:0004786,3.82e-11,13;UBERON:0004119,6.16e-08,118;UBERON:0000925,6.16e-08,118;UBERON:0006595,6.16e-08,118;UBERON:0003350,8.13e-08,9;UBERON:0004808,8.13e-08,9;UBERON:0001277,8.13e-08,9;UBERON:0001007,8.35e-08,116;UBERON:0001555,8.35e-08,116;UBERON:0007026,8.35e-08,116;UBERON:0004923,1.26e-07,24;UBERON:0003135,4.18e-07,15;UBERON:0004921,5.79e-07,114;UBERON:0000473,8.59e-07,14;UBERON:0003133,8.81e-07,24 | |||
|phase1_expression=0.160148847104794,10.1202868215415,10.9199817453489,16.030603199262,23.041203577532,7.55456723603504,9.1108929832255,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,13.4393635146462,10.5528269290898,2.29692785646008,8.61523992318149,7.75696437669201,23.9429508515031,20.9185007700743,9.09095093686749,0,0,0,11.2652131702997,5.81821258754723,6.53341940039581,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,0,0,0,2.65974201088189,1.43752564364972,0,0,0,0.514518872071894,0,0.515672092277442,0,0,0,1.0165335962074,2.66788438833342,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0.151452386666368,0.377857800533928,6.08715426273523,1.72084775396277,1.3599426674155,0,1.29955283489534,0,1.96622188184453,5.11290967734173,2.85764605063156,1.41335829804136,0.422530259330042,0,2.54805239706646,0,0.865964164044856,1.26679932737549,2.52762222507392,5.59501010623394,0,1.03909497345377,0.693941307064543,2.13125834818499,1.15307748628029,0.150722640552623,2.23418543557839,0.125666591329675,6.17987419335935,0.289198713839823,0.884610551949874,1.61766849947409,1.54589062922275,2.42437626567611,42.8701050801681,0.292780797011547,0.209446706813455,19.1592791406444,0,0,0,0.299581278809645,0,0.125654352112864,0.695297280769106,0.767146371990992,0.20778804455956,0.324482526135515,0.203678727700633,2.73695335342205,2.0217820674694,1.47309299120532,0.130120442962704,0.459804208866946,0.180062129805349,0.452114453507145,0.680364991513279,0.640568601424249,0.281105173679186,0.776110112217047,0,0,0,0,0,0.348252166522167,0.823128545631774,0.796137067273973,0,0,0.284163499395593,0,0,0,0.23674473558521,0.393528463494808,0.154267112887378,0,0.536546802799238,0.233530684734339,0,0.164167464079095,0.162137619091711,0,0.439100230582101,0.134206418760372,0.210289948564127,0,36.3460661282178,15.073682299822,0.426576501070468,1.39342003116263,6.70110798874885,12.1010114774006,11.1189021922435,7.79925067061493,13.2868137232463,10.7054320570607,13.5721012752146,13.131127154716,9.35827618171777,14.3811105384675,19.4524244887225,20.5115511451998,0.189667900953082,0.114248512609729,0,0.203651327845314,0.775809948670503,1.05203729835478,1.26473074248515,1.91893192373483,1.72698600625512,2.34454611451421,0.296452627087149,0,0.393117990226406,0,0,0.964708639009667,1.01850340712568,0.863088412352432,0.810676133875177,0,1.43768206527355,1.48856379067401,2.18426371180192,0.505157755894224,1.97337154874103,0.964887042726734,1.66277871149944,0,0,0.169745085775188,0,0,0.238043640886014,1.36593553500459,0.472905432318573,1.10732344824387,0.318909537314974,0.655453258862952,0.345369963731791,1.59113964439663,0,0,0.491764273019036,0,0,0.234423373184406,0.163934945376675,0.757412781613119,0,0,0,0,0.222798674082394,0,0,0,0,2.57057053137446,3.40656204499845,0.35613120733451,0.651547837414304,1.48473110675282,2.65490276679926,0.971122544619926,0.302323556964751,0.377210159511796,0.590603785761546,1.22974059177571,3.10113951801865,2.18120237686503,1.06949213515416,0.632073515871632,0,1.03135543248187,1.02131881726136,0,0.129358683782755,0.857348140126369,0.532020700926821,0.356737635204141,0.822745103010605,0.913394847343798,4.4587624532105,0.847328283455281,0.441056796109924,4.122156323537,1.45317984026315,1.08563264870681,1.3130957840345,0.328281799490123,15.7399651780119,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,7.63736494412091,0,1.42323626988794,2.37611749807963,3.13632444021703,5.67742665740062,3.64133735239016,4.21532624199213,2.09404753587224,27.2191443912765,0.621339313086926,4.50954350947352,5.23307911153926,2.97825282822776,5.25018208528929,4.39143399824286,5.06868376472335,7.27614879603675,11.3277814814237,20.0281347853108,13.2871266454303,9.50499020650956,0,0.202725215290164,0.102710957164827,0,0,0.39736270956253,0,0,0.201932899896295,0,0,0.292373642219257,0,0,3.62768613784338,0,0.269141569828427,0,3.28422309854724,2.43987218086537,3.84618410961257,2.78678892802786,0.501572104035363,0,0,0.572895513439397,0.68741272937475,0.685082519770642,0,0.675022500231806,1.80128481289688,0.453142408984205,0,0,0,0.170733605754134,1.21553358534147,0,0.551530525350042,1.33348036680969,1.23621034343337,0.962757628775446,1.26348605881899,1.01391719956096,2.07488975524684,1.12369808963859,1.21647789569252,1.55075766180156,1.42888107384922,1.15884325944855,1.15745532278223,2.06042950401653,1.47198920134397,0.685738504770831,0.70990322463735,1.1921809497366,1.45346416632329,1.03520318456864,0.930760686808441,2.0122077016005,1.8414879800649,1.22223702461276,0.561142271657738,1.18635018124174,1.0835493061312,0.409231043169689,1.08455788830176,1.73615949883027,0.499621155875892,1.40358965067245,2.36358159453128,1.91288332068843,1.32354851471709,0.695603506861264 | |phase1_expression=0.160148847104794,10.1202868215415,10.9199817453489,16.030603199262,23.041203577532,7.55456723603504,9.1108929832255,0,0,0,0,0,0,0,0,0,0,0,0,0,1.78590909317247,0,0,13.4393635146462,10.5528269290898,2.29692785646008,8.61523992318149,7.75696437669201,23.9429508515031,20.9185007700743,9.09095093686749,0,0,0,11.2652131702997,5.81821258754723,6.53341940039581,0,0,0,0,0,0,0.125896817975577,0.202753862439029,0,0.782391344348039,0,0,0,2.65974201088189,1.43752564364972,0,0,0,0.514518872071894,0,0.515672092277442,0,0,0,1.0165335962074,2.66788438833342,0.449949858640699,0,0,0.299600110518405,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0.15279824777681,0,0.142371680799103,0,0.151452386666368,0.377857800533928,6.08715426273523,1.72084775396277,1.3599426674155,0,1.29955283489534,0,1.96622188184453,5.11290967734173,2.85764605063156,1.41335829804136,0.422530259330042,0,2.54805239706646,0,0.865964164044856,1.26679932737549,2.52762222507392,5.59501010623394,0,1.03909497345377,0.693941307064543,2.13125834818499,1.15307748628029,0.150722640552623,2.23418543557839,0.125666591329675,6.17987419335935,0.289198713839823,0.884610551949874,1.61766849947409,1.54589062922275,2.42437626567611,42.8701050801681,0.292780797011547,0.209446706813455,19.1592791406444,0,0,0,0.299581278809645,0,0.125654352112864,0.695297280769106,0.767146371990992,0.20778804455956,0.324482526135515,0.203678727700633,2.73695335342205,2.0217820674694,1.47309299120532,0.130120442962704,0.459804208866946,0.180062129805349,0.452114453507145,0.680364991513279,0.640568601424249,0.281105173679186,0.776110112217047,0,0,0,0,0,0.348252166522167,0.823128545631774,0.796137067273973,0,0,0.284163499395593,0,0,0,0.23674473558521,0.393528463494808,0.154267112887378,0,0.536546802799238,0.233530684734339,0,0.164167464079095,0.162137619091711,0,0.439100230582101,0.134206418760372,0.210289948564127,0,36.3460661282178,15.073682299822,0.426576501070468,1.39342003116263,6.70110798874885,12.1010114774006,11.1189021922435,7.79925067061493,13.2868137232463,10.7054320570607,13.5721012752146,13.131127154716,9.35827618171777,14.3811105384675,19.4524244887225,20.5115511451998,0.189667900953082,0.114248512609729,0,0.203651327845314,0.775809948670503,1.05203729835478,1.26473074248515,1.91893192373483,1.72698600625512,2.34454611451421,0.296452627087149,0,0.393117990226406,0,0,0.964708639009667,1.01850340712568,0.863088412352432,0.810676133875177,0,1.43768206527355,1.48856379067401,2.18426371180192,0.505157755894224,1.97337154874103,0.964887042726734,1.66277871149944,0,0,0.169745085775188,0,0,0.238043640886014,1.36593553500459,0.472905432318573,1.10732344824387,0.318909537314974,0.655453258862952,0.345369963731791,1.59113964439663,0,0,0.491764273019036,0,0,0.234423373184406,0.163934945376675,0.757412781613119,0,0,0,0,0.222798674082394,0,0,0,0,2.57057053137446,3.40656204499845,0.35613120733451,0.651547837414304,1.48473110675282,2.65490276679926,0.971122544619926,0.302323556964751,0.377210159511796,0.590603785761546,1.22974059177571,3.10113951801865,2.18120237686503,1.06949213515416,0.632073515871632,0,1.03135543248187,1.02131881726136,0,0.129358683782755,0.857348140126369,0.532020700926821,0.356737635204141,0.822745103010605,0.913394847343798,4.4587624532105,0.847328283455281,0.441056796109924,4.122156323537,1.45317984026315,1.08563264870681,1.3130957840345,0.328281799490123,15.7399651780119,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,7.63736494412091,0,1.42323626988794,2.37611749807963,3.13632444021703,5.67742665740062,3.64133735239016,4.21532624199213,2.09404753587224,27.2191443912765,0.621339313086926,4.50954350947352,5.23307911153926,2.97825282822776,5.25018208528929,4.39143399824286,5.06868376472335,7.27614879603675,11.3277814814237,20.0281347853108,13.2871266454303,9.50499020650956,0,0.202725215290164,0.102710957164827,0,0,0.39736270956253,0,0,0.201932899896295,0,0,0.292373642219257,0,0,3.62768613784338,0,0.269141569828427,0,3.28422309854724,2.43987218086537,3.84618410961257,2.78678892802786,0.501572104035363,0,0,0.572895513439397,0.68741272937475,0.685082519770642,0,0.675022500231806,1.80128481289688,0.453142408984205,0,0,0,0.170733605754134,1.21553358534147,0,0.551530525350042,1.33348036680969,1.23621034343337,0.962757628775446,1.26348605881899,1.01391719956096,2.07488975524684,1.12369808963859,1.21647789569252,1.55075766180156,1.42888107384922,1.15884325944855,1.15745532278223,2.06042950401653,1.47198920134397,0.685738504770831,0.70990322463735,1.1921809497366,1.45346416632329,1.03520318456864,0.930760686808441,2.0122077016005,1.8414879800649,1.22223702461276,0.561142271657738,1.18635018124174,1.0835493061312,0.409231043169689,1.08455788830176,1.73615949883027,0.499621155875892,1.40358965067245,2.36358159453128,1.91288332068843,1.32354851471709,0.695603506861264 | ||
|short_description=p6@Etl4 | |short_description=p6@Etl4 | ||
}} | }} |
Latest revision as of 08:52, 26 September 2015
Short description: | p6@Etl4 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_Etl4_5end |
Coexpression cluster: | MCL_coexpression_mm9:195 |
Association with transcript: | -12bp_to_ENSMUST00000114606, ENSMUST00000114608_5end |
EntrezGene: | Etl4 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 8.13e-08 | 9 |
epithelial cell of alimentary canal | 8.13e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.18e-23 | 31 |
gastrointestinal system | 8.65e-21 | 47 |
mucosa | 1.18e-12 | 15 |
intestinal mucosa | 3.82e-11 | 13 |
wall of intestine | 3.82e-11 | 13 |
gastrointestinal system mucosa | 3.82e-11 | 13 |
endoderm-derived structure | 6.16e-08 | 118 |
endoderm | 6.16e-08 | 118 |
presumptive endoderm | 6.16e-08 | 118 |
epithelium of mucosa | 8.13e-08 | 9 |
gastrointestinal system epithelium | 8.13e-08 | 9 |
intestinal epithelium | 8.13e-08 | 9 |
digestive system | 8.35e-08 | 116 |
digestive tract | 8.35e-08 | 116 |
primitive gut | 8.35e-08 | 116 |
organ component layer | 1.26e-07 | 24 |
male reproductive organ | 4.18e-07 | 15 |
subdivision of digestive tract | 5.79e-07 | 114 |
testis | 8.59e-07 | 14 |
reproductive organ | 8.81e-07 | 24 |