FFCP PHASE1:Mm9::chr12:112997059..112997126,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=16593 | |EntrezGene=16593 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=13 | |||
|TSSclassifier=NA | |||
|UniProt=E9QKS0,E9QM07,Q8CD76,D3Z5T6,Q7TNF4,Q5UE59 | |UniProt=E9QKS0,E9QM07,Q8CD76,D3Z5T6,Q7TNF4,Q5UE59 | ||
|association_with_transcript=0bp_to_ENSMUST00000021717,ENSMUST00000069328,ENSMUST00000084941,ENSMUST00000084942,NM_001025360,NM_001081959,NM_008450,uc007pdv.1,uc007pdw.1,uc007pdx.1_5end | |association_with_transcript=0bp_to_ENSMUST00000021717,ENSMUST00000069328,ENSMUST00000084941,ENSMUST00000084942,NM_001025360,NM_001081959,NM_008450,uc007pdv.1,uc007pdw.1,uc007pdx.1_5end | ||
|cluster_id=chr12:112997059..112997126,+ | |||
|description=CAGE_peak_1_at_Klc1_5end | |description=CAGE_peak_1_at_Klc1_5end | ||
|id=chr12:112997059..112997126,+ | |id=chr12:112997059..112997126,+ | ||
|ontology_enrichment_celltype=CL:0002319!1.67e-19!43;CL:0000221!2.82e-19!44;CL:0000133!2.82e-19!44;CL:0000055!3.01e-19!50;CL:0000540!7.84e-17!33;CL:0000047!7.84e-17!33;CL:0000031!7.84e-17!33;CL:0000404!7.84e-17!33;CL:0000393!1.49e-16!39;CL:0000211!1.49e-16!39;CL:0000117!1.52e-14!23;CL:0000337!1.52e-14!23;CL:0002321!3.43e-11!70;CL:0000220!3.43e-11!70 | |ontology_enrichment_celltype=CL:0002319!1.67e-19!43;CL:0000221!2.82e-19!44;CL:0000133!2.82e-19!44;CL:0000055!3.01e-19!50;CL:0000540!7.84e-17!33;CL:0000047!7.84e-17!33;CL:0000031!7.84e-17!33;CL:0000404!7.84e-17!33;CL:0000393!1.49e-16!39;CL:0000211!1.49e-16!39;CL:0000117!1.52e-14!23;CL:0000337!1.52e-14!23;CL:0002321!3.43e-11!70;CL:0000220!3.43e-11!70 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,1.67e-19,43;CL:0000221,2.82e-19,44;CL:0000133,2.82e-19,44;CL:0000540,7.84e-17,33;CL:0000047,7.84e-17,33;CL:0000031,7.84e-17,33;CL:0000404,7.84e-17,33;CL:0000393,1.49e-16,39;CL:0000211,1.49e-16,39;CL:0000117,1.52e-14,23;CL:0000337,1.52e-14,23;CL:0002321,3.43e-11,70 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!5.68e-34!75;UBERON:0001016!5.68e-34!75;UBERON:0001017!6.27e-33!73;UBERON:0005743!6.27e-33!73;UBERON:0004121!2.29e-29!102;UBERON:0000924!2.29e-29!102;UBERON:0006601!2.29e-29!102;UBERON:0002346!2.46e-24!71;UBERON:0003075!2.46e-24!71;UBERON:0007284!2.46e-24!71;UBERON:0001049!1.27e-23!52;UBERON:0005068!1.27e-23!52;UBERON:0006241!1.27e-23!52;UBERON:0007135!1.27e-23!52;UBERON:0000033!1.15e-22!63;UBERON:0000955!1.53e-22!50;UBERON:0006238!1.53e-22!50;UBERON:0002616!6.05e-22!49;UBERON:0002020!2.22e-20!34;UBERON:0003056!2.36e-19!49;UBERON:0003080!2.11e-17!40;UBERON:0002791!2.68e-17!29;UBERON:0003528!2.68e-17!29;UBERON:0001893!2.68e-17!29;UBERON:0002780!6.51e-17!39;UBERON:0001890!6.51e-17!39;UBERON:0006240!6.51e-17!39;UBERON:0007811!2.97e-13!86;UBERON:0000956!2.12e-12!21;UBERON:0001869!2.12e-12!21;UBERON:0000203!2.12e-12!21;UBERON:0000153!4.68e-12!94;UBERON:0002619!1.27e-10!17;UBERON:0000025!4.97e-09!114;UBERON:0004111!2.90e-08!122;UBERON:0002021!9.30e-08!10;UBERON:0000411!9.30e-08!10;UBERON:0001950!9.30e-08!10;UBERON:0003076!7.44e-07!12;UBERON:0003057!7.44e-07!12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,5.68e-34,75;UBERON:0001017,6.27e-33,73;UBERON:0004121,1.74e-31,95;UBERON:0000924,1.74e-31,95;UBERON:0006601,1.74e-31,95;UBERON:0002346,4.18e-27,64;UBERON:0003075,4.18e-27,64;UBERON:0007284,4.18e-27,64;UBERON:0010314,2.41e-26,92;UBERON:0000073,3.44e-25,54;UBERON:0001049,1.27e-23,52;UBERON:0005068,1.27e-23,52;UBERON:0006241,1.27e-23,52;UBERON:0007135,1.27e-23,52;UBERON:0010371,1.50e-23,73;UBERON:0000955,1.93e-20,47;UBERON:0006238,1.93e-20,47;UBERON:0002020,2.22e-20,34;UBERON:0002616,7.44e-20,46;UBERON:0003056,2.36e-19,49;UBERON:0003080,2.11e-17,40;UBERON:0003528,2.68e-17,29;UBERON:0002791,2.68e-17,29;UBERON:0001893,2.68e-17,29;UBERON:0002780,6.51e-17,39;UBERON:0001890,6.51e-17,39;UBERON:0006240,6.51e-17,39;UBERON:0000956,2.12e-12,21;UBERON:0001869,2.12e-12,21;UBERON:0000203,2.12e-12,21;UBERON:0002619,1.27e-10,17;UBERON:0000025,4.97e-09,114;UBERON:0004111,2.90e-08,122;UBERON:0002021,9.30e-08,10;UBERON:0000411,9.30e-08,10;UBERON:0001950,9.30e-08,10;UBERON:0003076,7.44e-07,12;UBERON:0003057,7.44e-07,12 | |||
|phase1_expression=24.3426247599287,22.6834014965585,24.1149596876454,40.2277401038084,29.0519523368881,19.1382369979554,17.2873354040689,22.2092116319511,13.2341398822567,14.7460651582856,17.635450727227,20.9003056567781,22.9408978107816,24.6525534821573,16.6554880907831,11.5410902412201,14.6907994406911,19.7163853348899,20.0187073064379,22.9170411970936,60.3807360072595,15.0922245825346,14.8883879809193,13.1193786690593,13.7645568640302,18.3754228516806,13.7843838770904,9.04979177280734,13.6816862008589,16.6339885641554,10.4213340007993,19.6859508772486,23.9875267157982,31.6963362030877,10.9763615505484,11.6364251750945,11.4334839506927,12.9744805528441,15.626706890476,15.7057123192139,14.1175557127443,13.6609096991689,12.62326917881,25.5570540490422,26.1552482546348,27.7155595764139,41.4667412504461,44.4771319016111,58.656210790104,56.3846707315422,51.2350303148827,44.5632949531412,16.6104779997159,28.2891235384424,19.4934403502629,46.0494390504345,57.5932214276901,57.7552743350735,213.443866206876,205.248499957549,200.290723507953,66.4135282855499,50.6898033783349,33.7462393980525,28.6771245144423,33.3925654024667,45.8388169093159,51.4852529130883,97.675614794586,108.139756603684,102.217931216772,224.236022756986,204.082531839291,107.424430911515,147.314488955029,142.478911924553,224.636397238753,226.389650425038,225.340784286909,231.19666239103,266.13755523941,228.160056303861,288.675220967428,152.508667318585,208.416809967569,179.13417996799,176.683255871687,163.285914542963,67.7749430331997,65.6716857327966,54.4945238759154,30.1148356943485,4.0798280022465,9.71465744948071,10.3964226791627,10.3046184032387,23.7351070022661,40.7328470961558,38.4483286812246,51.5875778785097,29.4362747333262,47.4807966432976,96.8259910885254,113.770672504533,24.0305055522448,18.4952701796822,30.8369911459018,18.954524033364,21.4918443427153,22.5632051378534,26.7167403219849,24.9661692215956,24.4452427091422,27.8836885022352,28.2212897125692,21.4889871173745,19.5284024510155,19.9547112549478,20.3460426948471,32.3533699894818,22.3049933644997,26.183263669302,24.2309289583559,125.895742714965,136.768699549186,14.0501380364725,13.539109069169,15.5974710058286,9.27612657633372,109.347166765521,101.565133825735,131.937069718508,136.625915671129,157.265006258153,129.659739805165,133.362318241697,37.2732071692158,22.1444407685966,16.9324248150562,30.3036272476523,31.8795085258624,48.2794419310293,54.5588253310208,45.9649694398931,56.8104767913588,56.1138094847642,60.6250157901446,53.8103011137153,24.574751194344,26.0966390631591,23.7534017621331,25.2075092291711,24.7462051810782,27.5119211552512,30.0441919155597,22.2918378836712,7.02213187313235,10.0365683774739,11.6507034752193,27.1334762021507,29.7848096175992,28.0896815879183,34.8014761310259,35.0240332510379,38.2582439960698,36.0427614363132,44.8016580337364,40.7511044861422,49.6970746738711,41.370200947932,49.2087673943344,53.0705954353956,34.688918215986,36.5041459028211,113.977152121757,101.258138581216,23.4597335918497,12.164726066523,21.9686898051291,26.0105072483691,26.4178295710291,22.1851877085677,20.0140239460383,17.8812088545806,23.2519240156811,14.493508015713,16.8394589896181,17.7071260116624,26.5151158482003,18.8752075817387,20.3169766882213,23.1003876975066,19.7254616991205,19.6507441688734,22.5415471346161,19.9578301288408,16.4859614092482,20.8303385074246,24.2195937185905,15.6466756858378,18.5258498852822,15.4246454902251,8.59712618552732,15.3497497258807,13.1694526725846,11.4679677316275,11.3601667977562,8.44120059133459,7.63877555344259,12.6586300478357,7.29608520487659,9.33508804839477,23.0029130443767,12.6527922207291,11.2333562321242,12.6289438973556,7.89348619496414,7.23665282045051,35.2878593218215,25.012866353704,26.4003261836082,19.860175035697,19.9486711045227,31.826188913945,26.8989314201196,44.2953380637203,39.0935157383354,40.7495028953746,55.330804724148,36.5415191816096,40.7536557203514,46.4323478046652,22.6186925908908,35.8977751320348,16.7199852826472,17.6599517635029,147.064340428817,161.283280750872,17.5410391553043,24.4896799388242,55.5294466172612,63.2510765760554,66.3504065017021,43.9702588232696,50.5752990167035,62.2768367735431,57.483119637835,74.5252437673845,76.6858289216256,154.555553198889,24.4136946558222,30.8053494344352,28.6681048462294,25.9003093066881,46.460798418987,19.4224508923985,17.2324427469908,16.0314317792513,18.0134154657271,19.3684143204674,27.3933990758314,25.0838273339479,18.1813662976208,32.8678228253249,33.7339547439996,22.6898195146011,32.0013229408561,29.3499583271036,27.1653235943784,27.6494775190754,27.6650764481947,42.0950409540887,40.3145100475196,44.1474176216169,31.2113371724735,26.6908409288413,18.3038570385618,38.7482694412478,26.1572371247367,27.8042583918798,27.4556391207214,23.6362895632888,24.7758711135373,147.969391004387,15.3783792718067,22.4961686079913,17.2230910453832,12.4323181623096,14.4895881384287,10.7525741407066,13.0883391095269,12.5956307091292,11.0559979043539,21.0027535963325,23.2506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| |phase1_expression=24.3426247599287,22.6834014965585,24.1149596876454,40.2277401038084,29.0519523368881,19.1382369979554,17.2873354040689,22.2092116319511,13.2341398822567,14.7460651582856,17.635450727227,20.9003056567781,22.9408978107816,24.6525534821573,16.6554880907831,11.5410902412201,14.6907994406911,19.7163853348899,20.0187073064379,22.9170411970936,60.3807360072595,15.0922245825346,14.8883879809193,13.1193786690593,13.7645568640302,18.3754228516806,13.7843838770904,9.04979177280734,13.6816862008589,16.6339885641554,10.4213340007993,19.6859508772486,23.9875267157982,31.6963362030877,10.9763615505484,11.6364251750945,11.4334839506927,12.9744805528441,15.626706890476,15.7057123192139,14.1175557127443,13.6609096991689,12.62326917881,25.5570540490422,26.1552482546348,27.7155595764139,41.4667412504461,44.4771319016111,58.656210790104,56.3846707315422,51.2350303148827,44.5632949531412,16.6104779997159,28.2891235384424,19.4934403502629,46.0494390504345,57.5932214276901,57.7552743350735,213.443866206876,205.248499957549,200.290723507953,66.4135282855499,50.6898033783349,33.7462393980525,28.6771245144423,33.3925654024667,45.8388169093159,51.4852529130883,97.675614794586,108.139756603684,102.217931216772,224.236022756986,204.082531839291,107.424430911515,147.314488955029,142.478911924553,224.636397238753,226.389650425038,225.340784286909,231.19666239103,266.13755523941,228.160056303861,288.675220967428,152.508667318585,208.416809967569,179.13417996799,176.683255871687,163.285914542963,67.7749430331997,65.6716857327966,54.4945238759154,30.1148356943485,4.0798280022465,9.71465744948071,10.3964226791627,10.3046184032387,23.7351070022661,40.7328470961558,38.4483286812246,51.5875778785097,29.4362747333262,47.4807966432976,96.8259910885254,113.770672504533,24.0305055522448,18.4952701796822,30.8369911459018,18.954524033364,21.4918443427153,22.5632051378534,26.7167403219849,24.9661692215956,24.4452427091422,27.8836885022352,28.2212897125692,21.4889871173745,19.5284024510155,19.9547112549478,20.3460426948471,32.3533699894818,22.3049933644997,26.183263669302,24.2309289583559,125.895742714965,136.768699549186,14.0501380364725,13.539109069169,15.5974710058286,9.27612657633372,109.347166765521,101.565133825735,131.937069718508,136.625915671129,157.265006258153,129.659739805165,133.362318241697,37.2732071692158,22.1444407685966,16.9324248150562,30.3036272476523,31.8795085258624,48.2794419310293,54.5588253310208,45.9649694398931,56.8104767913588,56.1138094847642,60.6250157901446,53.8103011137153,24.574751194344,26.0966390631591,23.7534017621331,25.2075092291711,24.7462051810782,27.5119211552512,30.0441919155597,22.2918378836712,7.02213187313235,10.0365683774739,11.6507034752193,27.1334762021507,29.7848096175992,28.0896815879183,34.8014761310259,35.0240332510379,38.2582439960698,36.0427614363132,44.8016580337364,40.7511044861422,49.6970746738711,41.370200947932,49.2087673943344,53.0705954353956,34.688918215986,36.5041459028211,113.977152121757,101.258138581216,23.4597335918497,12.164726066523,21.9686898051291,26.0105072483691,26.4178295710291,22.1851877085677,20.0140239460383,17.8812088545806,23.2519240156811,14.493508015713,16.8394589896181,17.7071260116624,26.5151158482003,18.8752075817387,20.3169766882213,23.1003876975066,19.7254616991205,19.6507441688734,22.5415471346161,19.9578301288408,16.4859614092482,20.8303385074246,24.2195937185905,15.6466756858378,18.5258498852822,15.4246454902251,8.59712618552732,15.3497497258807,13.1694526725846,11.4679677316275,11.3601667977562,8.44120059133459,7.63877555344259,12.6586300478357,7.29608520487659,9.33508804839477,23.0029130443767,12.6527922207291,11.2333562321242,12.6289438973556,7.89348619496414,7.23665282045051,35.2878593218215,25.012866353704,26.4003261836082,19.860175035697,19.9486711045227,31.826188913945,26.8989314201196,44.2953380637203,39.0935157383354,40.7495028953746,55.330804724148,36.5415191816096,40.7536557203514,46.4323478046652,22.6186925908908,35.8977751320348,16.7199852826472,17.6599517635029,147.064340428817,161.283280750872,17.5410391553043,24.4896799388242,55.5294466172612,63.2510765760554,66.3504065017021,43.9702588232696,50.5752990167035,62.2768367735431,57.483119637835,74.5252437673845,76.6858289216256,154.555553198889,24.4136946558222,30.8053494344352,28.6681048462294,25.9003093066881,46.460798418987,19.4224508923985,17.2324427469908,16.0314317792513,18.0134154657271,19.3684143204674,27.3933990758314,25.0838273339479,18.1813662976208,32.8678228253249,33.7339547439996,22.6898195146011,32.0013229408561,29.3499583271036,27.1653235943784,27.6494775190754,27.6650764481947,42.0950409540887,40.3145100475196,44.1474176216169,31.2113371724735,26.6908409288413,18.3038570385618,38.7482694412478,26.1572371247367,27.8042583918798,27.4556391207214,23.6362895632888,24.7758711135373,147.969391004387,15.3783792718067,22.4961686079913,17.2230910453832,12.4323181623096,14.4895881384287,10.7525741407066,13.0883391095269,12.5956307091292,11.0559979043539,21.0027535963325,23.2506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| ||
|short_description=p1@Klc1 | |short_description=p1@Klc1 | ||
}} | }} |
Latest revision as of 08:53, 26 September 2015
Short description: | p1@Klc1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Klc1_5end |
Coexpression cluster: | MCL_coexpression_mm9:13 |
Association with transcript: | 0bp_to_ENSMUST00000021717, ENSMUST00000069328, ENSMUST00000084941, ENSMUST00000084942, NM_001025360, NM_001081959, NM_008450, uc007pdv.1, uc007pdw.1, uc007pdx.1_5end |
EntrezGene: | Klc1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 1.67e-19 | 43 |
ectodermal cell | 2.82e-19 | 44 |
neurectodermal cell | 2.82e-19 | 44 |
neuron | 7.84e-17 | 33 |
neuronal stem cell | 7.84e-17 | 33 |
neuroblast | 7.84e-17 | 33 |
electrically signaling cell | 7.84e-17 | 33 |
electrically responsive cell | 1.49e-16 | 39 |
electrically active cell | 1.49e-16 | 39 |
CNS neuron (sensu Vertebrata) | 1.52e-14 | 23 |
neuroblast (sensu Vertebrata) | 1.52e-14 | 23 |
embryonic cell | 3.43e-11 | 70 |