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FFCP PHASE1:Mm9::chr2:20890358..20890371,+: Difference between revisions

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{{FFCP
{{FFCP
|id=chr2:20890358..20890371,+
|DHSsupport=NA
|short_description=p3@Gm13375
|DPIdataset=NA
|description=CAGE_peak_3_at_Gm13375_5end
|association_with_transcript=-129bp_to_NR_033225,uc012brm.1_5end
|EntrezGene=433408
|EntrezGene=433408
|HGNC=
|HGNC=
|MCL_coexpression_id=2852
|TSSclassifier=NA
|UniProt=
|UniProt=
|association_with_transcript=-129bp_to_NR_033225,uc012brm.1_5end
|cluster_id=chr2:20890358..20890371,+
|description=CAGE_peak_3_at_Gm13375_5end
|id=chr2:20890358..20890371,+
|ontology_enrichment_celltype=CL:0000221!3.77e-16!44;CL:0000133!3.77e-16!44;CL:0002319!4.68e-16!43;CL:0000117!8.65e-14!23;CL:0000337!8.65e-14!23;CL:0000540!5.51e-12!33;CL:0000047!5.51e-12!33;CL:0000031!5.51e-12!33;CL:0000404!5.51e-12!33;CL:0000055!5.97e-12!50;CL:0000393!7.00e-09!39;CL:0000211!7.00e-09!39;CL:0002321!4.52e-08!70;CL:0000220!4.52e-08!70
|ontology_enrichment_celltype_v019_2=CL:0002319,3.14e-26,43;CL:0000221,1.98e-25,44;CL:0000133,1.98e-25,44;CL:0000117,2.49e-23,23;CL:0000337,2.49e-23,23;CL:0000540,6.54e-18,33;CL:0000047,6.54e-18,33;CL:0000031,6.54e-18,33;CL:0000404,6.54e-18,33;CL:0002321,7.76e-15,70;CL:0000393,3.52e-14,39;CL:0000211,3.52e-14,39;CL:0002453,5.27e-12,8;CL:0002609,1.46e-10,6;CL:0000333,2.94e-09,10;CL:0000095,2.94e-09,10;CL:0000243,2.94e-09,10;CL:0000123,2.94e-09,10;CL:0000125,2.94e-09,10;CL:0000030,2.94e-09,10;CL:0000339,2.94e-09,10;CL:0000128,7.34e-09,6;CL:0000126,7.34e-09,6;CL:0000127,7.34e-09,6
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0001017!5.13e-27!73;UBERON:0005743!5.13e-27!73;UBERON:0000073!1.57e-26!75;UBERON:0001016!1.57e-26!75;UBERON:0004121!8.25e-24!102;UBERON:0000924!8.25e-24!102;UBERON:0006601!8.25e-24!102;UBERON:0002346!1.41e-23!71;UBERON:0003075!1.41e-23!71;UBERON:0007284!1.41e-23!71;UBERON:0000033!1.54e-21!63;UBERON:0001049!8.23e-21!52;UBERON:0005068!8.23e-21!52;UBERON:0006241!8.23e-21!52;UBERON:0007135!8.23e-21!52;UBERON:0000955!2.03e-19!50;UBERON:0006238!2.03e-19!50;UBERON:0002616!6.65e-19!49;UBERON:0003056!1.90e-18!49;UBERON:0003080!9.96e-15!40;UBERON:0002020!1.75e-14!34;UBERON:0002780!3.47e-14!39;UBERON:0001890!3.47e-14!39;UBERON:0006240!3.47e-14!39;UBERON:0002791!8.31e-12!29;UBERON:0003528!8.31e-12!29;UBERON:0001893!8.31e-12!29;UBERON:0000025!3.96e-11!114;UBERON:0007811!1.13e-10!86;UBERON:0004111!3.39e-10!122;UBERON:0000153!4.79e-09!94;UBERON:0000956!3.40e-08!21;UBERON:0001869!3.40e-08!21;UBERON:0000203!3.40e-08!21;UBERON:0003076!6.87e-07!12;UBERON:0003057!6.87e-07!12
|ontology_enrichment_uberon_v019_2=UBERON:0001017,9.69e-33,73;UBERON:0001016,1.53e-31,75;UBERON:0004121,2.58e-29,95;UBERON:0000924,2.58e-29,95;UBERON:0006601,2.58e-29,95;UBERON:0002346,1.60e-27,64;UBERON:0003075,1.60e-27,64;UBERON:0007284,1.60e-27,64;UBERON:0010314,1.96e-24,92;UBERON:0000073,8.83e-24,54;UBERON:0001049,4.12e-23,52;UBERON:0005068,4.12e-23,52;UBERON:0006241,4.12e-23,52;UBERON:0007135,4.12e-23,52;UBERON:0010371,8.68e-23,73;UBERON:0002020,1.11e-19,34;UBERON:0000955,6.48e-19,47;UBERON:0006238,6.48e-19,47;UBERON:0002616,5.88e-18,46;UBERON:0003056,1.78e-16,49;UBERON:0003528,1.27e-15,29;UBERON:0002791,1.27e-15,29;UBERON:0001893,1.27e-15,29;UBERON:0003080,6.86e-14,40;UBERON:0002780,6.31e-13,39;UBERON:0001890,6.31e-13,39;UBERON:0006240,6.31e-13,39;UBERON:0000025,9.49e-11,114;UBERON:0003076,1.07e-10,12;UBERON:0003057,1.07e-10,12;UBERON:0001954,2.09e-10,7;UBERON:0003022,2.09e-10,7;UBERON:0002421,2.09e-10,7;UBERON:0000349,2.09e-10,7;UBERON:0002600,2.09e-10,7;UBERON:0004111,4.62e-10,122;UBERON:0000956,5.89e-10,21;UBERON:0001869,5.89e-10,21;UBERON:0000203,5.89e-10,21;UBERON:0000369,7.67e-09,5;UBERON:0002435,7.67e-09,5;UBERON:0000204,7.67e-09,5;UBERON:0010082,7.67e-09,5;UBERON:0000483,1.61e-08,174;UBERON:0000119,2.74e-08,176;UBERON:0002619,3.30e-07,17;UBERON:0002420,3.63e-07,8;UBERON:0007245,3.63e-07,8;UBERON:0010009,3.63e-07,8;UBERON:0010011,3.63e-07,8;UBERON:0000454,3.63e-07,8
|phase1_expression=0.480446541314382,0.348975407639361,0,0.60492842261366,1.00179145989269,0,0.467225281191051,0.129123323441576,0,0,0,0,0,0,0,0,0,0.157731082679119,0,0,0.340173160604279,0.0992909512008853,0.522399578277871,0,0.22940928106717,0,0,0,0.190023419456374,0,0.221730510655305,0,0.61506478758457,0,0,0.831173226792462,0.204169356262369,0.418531630736908,0,0,0,0,0,0,0.202753862439029,0.367093504323363,1.56478268869608,5.01457859675027,1.97717564461025,1.74986909166855,1.25987779462826,2.87505128729943,0.167782606057736,0,0,0,0.286533439938757,0,4.45096213891115,5.81890077199236,5.70448263155561,0,0,0,0,0,3.29560121570245,7.68436610643109,2.17748185847803,2.70011876663381,3.57552434297349,1.99955689082663,3.09215957332259,3.42974237801871,5.46319184803947,3.67687514644008,2.20231761998777,2.42605942361857,0.768032666281217,4.3522474950964,5.30628332893976,2.6045668527838,0.558365998002762,0.56276261003168,1.68078072554491,0.883885756421003,1.70846016958924,2.98239113320481,0.075726193333184,0.604572480854284,0.289864488701678,0,0,0,0,0.448026887097336,0.140444420131752,0.170430322578058,0.259786004602869,0.70667914902068,0.563373679106722,1.28326477414318,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0,0.29688427812965,0.693941307064543,0.304465478312141,0,0.301445281105245,0.352766121407114,0.628332956648377,0.494389935468748,0.289198713839823,0,0.323533699894818,0.220841518460394,0.484875253135222,0,1.17112318804619,0.628340120440365,1.02182822083437,0,0,0.254140454146129,1.9472783122627,2.28750301409313,2.1361239859187,0.869121600961382,1.02286182932132,1.66230435647648,0.486723789203273,0.407357455401265,0.124406970610093,0.505445516867349,0.841767423545896,1.69156575851515,1.60931473103431,1.26043490863744,0.753524089178575,2.04109497453984,0.768682321709099,1.3118241438362,0.776110112217047,0.215567992932842,0.378212160335639,0.175951124163949,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,1.24275463521301,0.703578179943289,0.900310307305074,0.473489471170421,0.196764231747404,0.308534225774757,0.465067889500816,0,1.05088808130453,1.15191894939436,0.820837320395476,2.59420190546738,1.31579988682799,1.75640092232841,2.01309628140558,1.47202963994889,1.13195073617213,0,0,0.426576501070468,0.232236671860439,0.128867461322093,0.201683524623343,0.22237804384487,0.760902504450237,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.974820435595601,0.898819408654221,0,0,0.758671603812327,0.228497025219458,0,0.407302655690628,0.387904974335251,0.561086559122548,0.379419222745544,0,0.156998727841375,0.616985819609003,0.296452627087149,0,0,0.674586337154561,0,0.241177159752417,0.25462585178142,0.287696137450811,0.972811360650212,0.274561413188081,0,0,0,0,0.179397413521912,0,0.369506380333209,0.947457058852424,0.325929952884052,0.169745085775188,0.234690248288502,0.167506257441816,0,0.195133647857799,0,0,0.637819074629948,0.655453258862952,0.518054945597687,0.867894351489069,0,0,0,0,1.12385412991454,1.05490517932983,0,0.504941854408746,1.26203287766503,0,2.15423397732799,0.238968797952552,0.668396022247182,0.283076530788832,0,0.876767573733936,0.395287777946524,1.60660658210904,0,0.35613120733451,0.81443479676788,0.329940245945071,0,0.242780636154981,0,0,0,0.614870295887855,0.516856586336442,0.727067458955011,0,0.316036757935816,0,0,0.340439605753788,0.720244376125241,0.776152102696527,0.857348140126369,0.886701168211368,0.713475270408282,0.658196082408484,2.13125464380219,0.23467170806371,0.21183207086382,0,0.16488625294148,0,0.361877549568935,0,0,0,2.03967832211561,0,0,0,0.376736914009382,0.136694227721025,0.228778173206523,0.169978429993855,0.279902904647316,0.138199973804424,0,0.790839983952838,0.406638934253697,0.108005340821801,0,0.436725127492355,0.134864346384821,0.41326727862668,0,0.518459893167171,0,0,0.149516546043979,0.66183396182839,0,0.129159823477731,0.337912250981556,0.704143431874524,0.39061315453185,0.314578033277133,0,0,0,0.608175645870493,0.308132871494482,0.129920822977795,0.179026695667481,0.39736270956253,0,0,0,0.15241361331,0,0.0974578807397524,0,0.233753804363138,0,0,0.0897138566094757,0,0.19318959403219,0,0.183151624267265,0.214368379079066,1.00314420807073,1.6942555278512,0.460325236507177,0.572895513439397,0.515559547031063,0.685082519770642,0.755393897389701,0.675022500231806,1.80128481289688,1.81256963593682,0,0.830298780673413,1.99512436700516,0.682934423016537,0,0,0.183843508450014,0.44449345560323,0,0.64183841918363,0.505394423527595,0.760437899670719,0.188626341386076,0.280924522409647,0.320125762024346,0.229741875822453,0,0.347652977834566,0.38581844092741,0.412085900803307,0.147198920134397,0.342869252385415,0.354951612318675,0.715308569841963,0.581385666529314,0.752875043322645,0.25384382367503,0,0.526139422875686,0.271608227691724,0.561142271657738,0.355905054372522,0.492522411877817,0.409231043169689,0.309873682371932,0.578719832943424,0.999242311751784,0,0.859484216193193,0,0.441182838239031,0
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|short_description=p3@Gm13375
}}
}}

Latest revision as of 08:57, 26 September 2015

Short description:p3@Gm13375
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_3_at_Gm13375_5end
Coexpression cluster:MCL_coexpression_mm9:2852
Association with transcript: -129bp_to_NR_033225, uc012brm.1_5end
EntrezGene:Gm13375
Link to Zenbu:ZENBU


View on UCSC genome browser


Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression


Sample

p3@Gm13375

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.35
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.60
CD326+ enterocyte, pool2.CNhs13197.11849-124I41.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.47
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.13
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.16
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.34
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.10
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.52
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.23
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.19
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.22
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.62
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.83
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.20
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.42
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.20
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.37
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B71.56
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C25.01
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.98
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C31.75
Mouse Astrocytes, donor2.CNhs12078.11552-120C41.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C42.88
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.17
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.29
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.00
Mouse Granule cells, donor1.CNhs12131.11713-123C34.45
Mouse Granule cells, donor2.CNhs12357.11731-123E35.82
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C83.30
Mouse Microglia, donor2.CNhs12634.11736-123E87.68
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D52.18
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F52.70
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D93.58
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F12.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D53.09
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.43
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F25.46
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D63.68
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D32.20
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F32.43
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D70.77
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D44.35
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F45.31
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D82.60
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.56
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.68
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.88
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F61.71
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.98
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.60
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.29
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.45
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.14
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.17
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.71
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.56
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H11.28
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.25
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.23
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.69
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.00
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.35
adrenal gland, neonate N25.CNhs11223.1377-27I30.63
amnion, adult pregnant day17.5.CNhs10488.583-22A80.49
aorta, adult.CNhs10498.46-23H10.29
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.32
bone (os femoris), neonate N16.CNhs11225.1525-43A60.22
bone (os femoris), neonate N20.CNhs11195.1350-25C30.48
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B21.17
cerebellum, neonate N30.CNhs11135.1395-42I20.63
colon, adult.CNhs10468.36-18H71.02
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.25
corpora quadrigemina, adult.CNhs10501.16-22A41.95
corpus striatum, adult.CNhs10487.19-21D82.29
corpus striatum, neonate N00.CNhs11226.630-43F12.14
cortex, adult.CNhs10473.12-14D50.87
cortex, neonate N30.CNhs11107.1392-42F21.02
diencephalon, adult.CNhs10482.20-12F21.66
diencephalon, neonate N30.CNhs11201.1388-42B20.49
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.41
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.12
epididymis, adult.CNhs10490.58-23B20.51
eyeball, adult.CNhs10484.31-12G40.84
eyeball, embryo E12.CNhs11016.345-16C61.69
eyeball, embryo E14.CNhs10521.399-16E21.61
eyeball, embryo E15.CNhs10593.426-16C91.26
eyeball, embryo E17.CNhs11023.1261-18D40.75
eyeball, neonate N00.CNhs11207.633-15C62.04
eyeball, neonate N01.CNhs11140.1532-43E70.77
eyeball, neonate N02.CNhs11205.1551-44G81.31
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.22
forelimb, embryo E12.CNhs10600.359-14H20.38
forelimb, embryo E13.CNhs10589.384-1E20.18
forelimb, embryo E14.CNhs10577.413-26A80.22
forelimb, embryo E15.CNhs11007.437-20E70.28
forelimb, embryo E17.CNhs10598.1517-43C40.00
forelimb, embryo E18.CNhs11008.1520-43B50.21
gonad, embryo E13.CNhs11044.1564-45I60.40
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E91.24
heart, embryo E12.CNhs11015.353-12F50.70
heart, embryo E13.CNhs11013.376-3I90.90
heart, embryo E14.CNhs10597.403-26D40.47
heart, embryo E15.CNhs11017.431-16C80.20
heart, embryo E16.CNhs11021.457-17C60.31
heart, embryo E17.CNhs11025.479-18E50.47
heart, embryo E18.CNhs11030.1283-20G30.00
heart, neonate N00.CNhs11213.639-21E31.05
heart, neonate N03.CNhs11221.1349-25I21.15
heart, neonate N10.CNhs11118.749-24G10.82
heart, neonate N16.CNhs11209.782-15G12.59
heart, neonate N20.CNhs11127.821-26I61.32
heart, neonate N25.CNhs11196.1351-25D31.76
heart, neonate N30.CNhs11202.1390-42D22.01
hippocampus, adult.CNhs10478.13-16E81.47
hippocampus, neonate N00.CNhs11228.627-43G11.13
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.43
intestine, embryo E13.CNhs11010.381-16D50.23
intestine, embryo E15.CNhs10602.976-16D80.13
intestine, embryo E16.CNhs10585.463-22H40.20
intestine, embryo E17.CNhs10582.482-18D30.22
intestine, embryo E18.CNhs10526.1289-20F70.76
intestine, neonate N00.CNhs11126.644-26D10.47
intestine, neonate N01.CNhs11192.1322-23E90.16
intestine, neonate N06.CNhs11102.688-20B80.25
intestine, neonate N07.CNhs11095.720-20F20.40
intestine, neonate N10.CNhs11098.755-23A50.97
intestine, neonate N20.CNhs11187.827-18D10.90
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.76
kidney, embryo E15.CNhs10997.434-16F80.23
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.41
kidney, embryo E18.CNhs11001.1288-20C70.39
kidney, neonate N00.CNhs11214.646-21G70.56
kidney, neonate N10.CNhs11206.758-6D50.38
kidney, neonate N20.CNhs11113.832-19I10.00
kidney, neonate N25.CNhs11122.1353-25F30.16
kidney, neonate N30.CNhs11203.1385-42H10.62
liver, adult pregnant day01.CNhs10466.508-5B20.30
liver, embryo E12.CNhs10601.355-15F80.00
liver, embryo E13.CNhs10524.378-3H60.00
liver, embryo E14.CNhs10594.409-16E10.67
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.24
liver, embryo E17.CNhs10510.481-18A30.25
liver, embryo E18.CNhs10579.499-43G40.29
liver, neonate N00.CNhs11117.641-24F40.97
liver, neonate N03.CNhs11123.1345-25G20.27
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.18
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.37
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.33
lung, embryo E15.CNhs11020.432-17C50.17
lung, embryo E16.CNhs10998.458-17B60.23
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.00
lung, neonate N00.CNhs11224.640-42C60.20
lung, neonate N06.CNhs11212.683-20E50.00
lung, neonate N07.CNhs11111.715-19A30.00
lung, neonate N10.CNhs11219.750-23E60.64
lung, neonate N20.CNhs11109.822-18A40.66
lung, neonate N25.CNhs11119.1359-25C70.52
lung, neonate N30.CNhs11133.1394-42H20.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.12
medulla oblongata, neonate N30.CNhs11200.1396-42A31.05
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.50
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E11.26
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.00
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E32.15
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D80.67
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.28
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.00
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D50.88
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D60.40
olfactory brain, adult.CNhs10489.18-22I91.61
ovary, adult.CNhs10507.91-2I70.00
ovary, embryo E18.CNhs11040.505-44H70.36
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.33
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.24
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.00
pancreas, embryo E17.CNhs10599.1558-45G30.00
pancreas, embryo E18.CNhs10580.1535-43I70.61
pancreas, neonate N00.CNhs11105.645-26G90.52
pancreas, neonate N01.CNhs11138.1531-43D70.73
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.32
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E60.72
pituitary gland, embryo E13.CNhs11009.370-44C70.78
pituitary gland, embryo E14.CNhs11037.398-44A50.86
pituitary gland, embryo E15.CNhs10592.427-16B90.89
pituitary gland, embryo E16.CNhs11036.449-43F60.71
pituitary gland, embryo E17.CNhs11039.1265-44F50.66
pituitary gland, neonate N00.CNhs11190.1308-22E92.13
placenta, adult pregnant day10.CNhs10472.539-13I70.23
placenta, adult pregnant day17.CNhs10464.577-18G30.21
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.16
skin, neonate N00.CNhs11124.650-25G40.00
skin, neonate N03.CNhs11215.662-22H30.36
skin, neonate N06.CNhs11097.693-20I50.00
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C92.04
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.00
spleen, embryo E18.CNhs11011.1271-21F20.00
spleen, neonate N10.CNhs11116.752-24D10.38
spleen, neonate N20.CNhs11112.824-19H10.14
spleen, neonate N25.CNhs11099.1354-25G30.23
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.17
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.28
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.14
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E30.79
stomach, embryo E15.CNhs10603.1252-16G80.41
stomach, embryo E16.CNhs11022.459-17D40.11
stomach, embryo E17.CNhs11006.1035-18D50.00
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.41
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.52
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F50.15
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.00
testis, embryo E17.CNhs11029.486-18I50.13
testis, embryo E18.CNhs11027.503-18G50.34
testis, neonate N00.CNhs11189.1300-22B70.70
testis, neonate N07.CNhs11222.726-26I40.39
testis, neonate N10.CNhs11204.763-44D90.31
testis, neonate N20.CNhs11110.839-18H30.00
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.31
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.18
thymus, embryo E18.CNhs10595.1273-19G40.40
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.15
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.10
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.23
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.09
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.19
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.18
vagina, adult.CNhs10502.89-27D50.21
vesicular gland, adult.CNhs10491.51-27F81.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A11.69
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A20.46
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A30.57
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D70.52
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A40.69
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A71.80
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.81
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A90.00
whole body, embryo E11.CNhs11014.324-5I80.83
whole body, embryo E12.CNhs10587.857-27C92.00
whole body, embryo E13.CNhs10512.372-23H20.68
whole body, embryo E14.5.CNhs10578.420-27D20.00
whole body, embryo E14.CNhs10519.395-14B10.00
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.44
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G50.64
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G50.19
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G50.28
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G50.32
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.23
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.15
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.34
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G50.35
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.72
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G50.75
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G50.25
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.00
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G50.53
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.27
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G50.56
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.36
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.49
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.31
whole body, embryo E17.5.CNhs10513.490-9F90.58
whole body, embryo E17.CNhs10517.475-3I51.00
whole body, embryo E18.CNhs10516.493-3B30.00
whole body, neonate N00.CNhs10525.657-19C20.86
whole body, neonate N01.CNhs10576.659-23C60.00
whole body, neonate N06.CNhs10515.692-21D10.44
whole body, neonate N10.CNhs10518.761-6B40.00





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data


Uber anatomy
Ontology termp-valuen
central nervous system9.69e-3373
nervous system1.53e-3175
ectoderm-derived structure2.58e-2995
ectoderm2.58e-2995
presumptive ectoderm2.58e-2995
neurectoderm1.60e-2764
neural plate1.60e-2764
presumptive neural plate1.60e-2764
structure with developmental contribution from neural crest1.96e-2492
regional part of nervous system8.83e-2454
neural tube4.12e-2352
neural rod4.12e-2352
future spinal cord4.12e-2352
neural keel4.12e-2352
ecto-epithelium8.68e-2373
gray matter1.11e-1934
brain6.48e-1947
future brain6.48e-1947
regional part of brain5.88e-1846
pre-chordal neural plate1.78e-1649
brain grey matter1.27e-1529
regional part of telencephalon1.27e-1529
telencephalon1.27e-1529
anterior neural tube6.86e-1440
regional part of forebrain6.31e-1339
forebrain6.31e-1339
future forebrain6.31e-1339
tube9.49e-11114
posterior neural tube1.07e-1012
chordal neural plate1.07e-1012
Ammon's horn2.09e-107
lobe parts of cerebral cortex2.09e-107
hippocampal formation2.09e-107
limbic system2.09e-107
limbic lobe2.09e-107
anatomical conduit4.62e-10122
cerebral cortex5.89e-1021
cerebral hemisphere5.89e-1021
pallium5.89e-1021
corpus striatum7.67e-095
striatum7.67e-095
ventral part of telencephalon7.67e-095
future corpus striatum7.67e-095
epithelium1.61e-08174
cell layer2.74e-08176
regional part of cerebral cortex3.30e-0717
basal ganglion3.63e-078
nuclear complex of neuraxis3.63e-078
aggregate regional part of brain3.63e-078
collection of basal ganglia3.63e-078
cerebral subcortex3.63e-078