FFCP PHASE1:Mm9::chr2:25160647..25160666,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=14810 | |EntrezGene=14810 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=1169 | |MCL_coexpression_id=1169 | ||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-27bp_to_ENSMUST00000153465_5end | |association_with_transcript=-27bp_to_ENSMUST00000153465_5end | ||
|cluster_id=chr2:25160647..25160666,- | |||
|description=CAGE_peak_3_at_Grin1_5end | |description=CAGE_peak_3_at_Grin1_5end | ||
|id=chr2:25160647..25160666,- | |id=chr2:25160647..25160666,- | ||
|ontology_enrichment_celltype=CL:0002319!1.29e-16!43;CL:0000221!7.87e-16!44;CL:0000133!7.87e-16!44;CL:0000055!2.82e-14!50;CL:0000540!8.58e-14!33;CL:0000047!8.58e-14!33;CL:0000031!8.58e-14!33;CL:0000404!8.58e-14!33;CL:0000117!3.11e-13!23;CL:0000337!3.11e-13!23;CL:0000393!5.01e-12!39;CL:0000211!5.01e-12!39 | |ontology_enrichment_celltype=CL:0002319!1.29e-16!43;CL:0000221!7.87e-16!44;CL:0000133!7.87e-16!44;CL:0000055!2.82e-14!50;CL:0000540!8.58e-14!33;CL:0000047!8.58e-14!33;CL:0000031!8.58e-14!33;CL:0000404!8.58e-14!33;CL:0000117!3.11e-13!23;CL:0000337!3.11e-13!23;CL:0000393!5.01e-12!39;CL:0000211!5.01e-12!39 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.07e-24,23;CL:0000337,4.07e-24,23;CL:0002319,2.82e-22,43;CL:0000221,1.12e-21,44;CL:0000133,1.12e-21,44;CL:0002609,2.40e-18,6;CL:0000540,6.61e-16,33;CL:0000047,6.61e-16,33;CL:0000031,6.61e-16,33;CL:0000404,6.61e-16,33;CL:0000393,5.29e-13,39;CL:0000211,5.29e-13,39;CL:0000128,2.30e-12,6;CL:0000126,2.30e-12,6;CL:0000127,2.30e-12,6;CL:0002321,4.03e-12,70;CL:0002613,7.13e-11,3;CL:0000120,4.58e-10,3;CL:0002608,7.46e-10,3;CL:0002453,3.31e-09,8;CL:0000333,2.62e-07,10;CL:0000095,2.62e-07,10;CL:0000243,2.62e-07,10;CL:0000123,2.62e-07,10;CL:0000125,2.62e-07,10;CL:0000030,2.62e-07,10;CL:0000339,2.62e-07,10 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!9.56e-20!73;UBERON:0005743!9.56e-20!73;UBERON:0000073!1.47e-19!75;UBERON:0001016!1.47e-19!75;UBERON:0002020!1.26e-16!34;UBERON:0004121!4.51e-16!102;UBERON:0000924!4.51e-16!102;UBERON:0006601!4.51e-16!102;UBERON:0002346!1.65e-15!71;UBERON:0003075!1.65e-15!71;UBERON:0007284!1.65e-15!71;UBERON:0002791!4.48e-14!29;UBERON:0003528!4.48e-14!29;UBERON:0001893!4.48e-14!29;UBERON:0001049!1.87e-13!52;UBERON:0005068!1.87e-13!52;UBERON:0006241!1.87e-13!52;UBERON:0007135!1.87e-13!52;UBERON:0003056!3.13e-12!49;UBERON:0000033!4.36e-12!63;UBERON:0000955!1.88e-11!50;UBERON:0006238!1.88e-11!50;UBERON:0002616!6.40e-11!49;UBERON:0002780!1.28e-10!39;UBERON:0001890!1.28e-10!39;UBERON:0006240!1.28e-10!39;UBERON:0003080!1.53e-10!40;UBERON:0000956!1.37e-09!21;UBERON:0001869!1.37e-09!21;UBERON:0000203!1.37e-09!21;UBERON:0002619!6.63e-07!17 | |ontology_enrichment_uberon=UBERON:0001017!9.56e-20!73;UBERON:0005743!9.56e-20!73;UBERON:0000073!1.47e-19!75;UBERON:0001016!1.47e-19!75;UBERON:0002020!1.26e-16!34;UBERON:0004121!4.51e-16!102;UBERON:0000924!4.51e-16!102;UBERON:0006601!4.51e-16!102;UBERON:0002346!1.65e-15!71;UBERON:0003075!1.65e-15!71;UBERON:0007284!1.65e-15!71;UBERON:0002791!4.48e-14!29;UBERON:0003528!4.48e-14!29;UBERON:0001893!4.48e-14!29;UBERON:0001049!1.87e-13!52;UBERON:0005068!1.87e-13!52;UBERON:0006241!1.87e-13!52;UBERON:0007135!1.87e-13!52;UBERON:0003056!3.13e-12!49;UBERON:0000033!4.36e-12!63;UBERON:0000955!1.88e-11!50;UBERON:0006238!1.88e-11!50;UBERON:0002616!6.40e-11!49;UBERON:0002780!1.28e-10!39;UBERON:0001890!1.28e-10!39;UBERON:0006240!1.28e-10!39;UBERON:0003080!1.53e-10!40;UBERON:0000956!1.37e-09!21;UBERON:0001869!1.37e-09!21;UBERON:0000203!1.37e-09!21;UBERON:0002619!6.63e-07!17 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,2.89e-20,34;UBERON:0003528,1.54e-18,29;UBERON:0002791,1.54e-18,29;UBERON:0001893,1.54e-18,29;UBERON:0001017,2.63e-16,73;UBERON:0001016,9.47e-16,75;UBERON:0001954,2.08e-15,7;UBERON:0003022,2.08e-15,7;UBERON:0002421,2.08e-15,7;UBERON:0000349,2.08e-15,7;UBERON:0002600,2.08e-15,7;UBERON:0001049,8.59e-14,52;UBERON:0005068,8.59e-14,52;UBERON:0006241,8.59e-14,52;UBERON:0007135,8.59e-14,52;UBERON:0000073,3.80e-13,54;UBERON:0002780,5.05e-13,39;UBERON:0001890,5.05e-13,39;UBERON:0006240,5.05e-13,39;UBERON:0000956,6.74e-13,21;UBERON:0001869,6.74e-13,21;UBERON:0000203,6.74e-13,21;UBERON:0003080,1.27e-12,40;UBERON:0002616,2.72e-12,46;UBERON:0000955,5.80e-12,47;UBERON:0006238,5.80e-12,47;UBERON:0004121,1.83e-11,95;UBERON:0000924,1.83e-11,95;UBERON:0006601,1.83e-11,95;UBERON:0000369,4.93e-11,5;UBERON:0002435,4.93e-11,5;UBERON:0000204,4.93e-11,5;UBERON:0010082,4.93e-11,5;UBERON:0002346,1.58e-10,64;UBERON:0003075,1.58e-10,64;UBERON:0007284,1.58e-10,64;UBERON:0003056,9.14e-10,49;UBERON:0010371,8.69e-09,73;UBERON:0002420,6.99e-07,8;UBERON:0007245,6.99e-07,8;UBERON:0010009,6.99e-07,8;UBERON:0010011,6.99e-07,8;UBERON:0000454,6.99e-07,8 | |||
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| ||
|short_description=p3@Grin1 | |short_description=p3@Grin1 | ||
}} | }} |
Latest revision as of 10:09, 26 September 2015
Short description: | p3@Grin1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Grin1_5end |
Coexpression cluster: | MCL_coexpression_mm9:1169 |
Association with transcript: | -27bp_to_ENSMUST00000153465_5end |
EntrezGene: | Grin1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.07e-24 | 23 |
neuroblast (sensu Vertebrata) | 4.07e-24 | 23 |
neural cell | 2.82e-22 | 43 |
ectodermal cell | 1.12e-21 | 44 |
neurectodermal cell | 1.12e-21 | 44 |
neuron of cerebral cortex | 2.40e-18 | 6 |
neuron | 6.61e-16 | 33 |
neuronal stem cell | 6.61e-16 | 33 |
neuroblast | 6.61e-16 | 33 |
electrically signaling cell | 6.61e-16 | 33 |
electrically responsive cell | 5.29e-13 | 39 |
electrically active cell | 5.29e-13 | 39 |
oligodendrocyte | 2.30e-12 | 6 |
macroglial cell | 2.30e-12 | 6 |
astrocyte | 2.30e-12 | 6 |
embryonic cell | 4.03e-12 | 70 |
striatum neuron | 7.13e-11 | 3 |
granule cell | 4.58e-10 | 3 |
hippocampal neuron | 7.46e-10 | 3 |
oligodendrocyte precursor cell | 3.31e-09 | 8 |
migratory neural crest cell | 2.62e-07 | 10 |
neuron associated cell | 2.62e-07 | 10 |
glial cell (sensu Vertebrata) | 2.62e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 2.62e-07 | 10 |
glial cell | 2.62e-07 | 10 |
glioblast | 2.62e-07 | 10 |
glioblast (sensu Vertebrata) | 2.62e-07 | 10 |