FFCP PHASE1:Mm9::chr6:101327996..101328010,-: Difference between revisions
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{{FFCP|EntrezGene=55983|HGNC=|UniProt=Q69ZS0,Q3UPS8|association_with_transcript=-105bp_to_ENSMUST00000075994,NM_018884,uc009dcd.2,uc009dcf.1,uc012eps.1_5end|description=CAGE_peak_1_at_Pdzrn3_5end|id=chr6:101327996..101328010,-|ontology_enrichment_celltype=CL:0000107!3.03e-07!9|ontology_enrichment_celltype_v019_2=CL:0000107,2.65e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!3.77e-12!333;UBERON:0000922!1.13e-09!328;UBERON:0004535!6.98e-09!23;UBERON:0001009!6.98e-09!23;UBERON:0007100!2.55e-08!18;UBERON:0000948!2.55e-08!18;UBERON:0005498!2.55e-08!18;UBERON:0004140!2.55e-08!18;UBERON:0009881!2.55e-08!18;UBERON:0004141!2.55e-08!18;UBERON:0003084!2.55e-08!18;UBERON:0007005!2.55e-08!18;UBERON:0004139!2.55e-08!18;UBERON:0004291!2.55e-08!18;UBERON:0002410!3.03e-07!9;UBERON:0000010!5.33e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0004535,5.89e-09,23;UBERON:0001009,5.89e-09,23;UBERON:0007100,2.18e-08,18;UBERON:0000948,2.18e-08,18;UBERON:0005498,2.18e-08,18;UBERON:0004140,2.18e-08,18;UBERON:0009881,2.18e-08,18;UBERON:0004141,2.18e-08,18;UBERON:0003084,2.18e-08,18;UBERON:0007005,2.18e-08,18;UBERON:0004139,2.18e-08,18;UBERON:0004291,2.18e-08,18;UBERON:0002410,2.65e-07,9;UBERON:0000010,4.69e-07,11;UBERON:0000922,9.47e-07,320|phase1_expression=11.8510146857548,0.697950815278722,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,3.656861476496,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,16.1147927008739,18.1464706882931,18.5382219683298,13.3006528539167,0.218025156380447,1.75748946187577,2.72201858703997,4.61955191363696,2.87505128729943,0,0,0,14.1492689819771,20.3438742356517,17.0171790451556,2.42779753031517,2.11596391708813,3.80298842103708,3.38844532069132,6.22506357277798,0,0.988866362566974,0,8.98800331555214,6.53171119046643,4.14758449233911,4.86021377994086,5.8890989178387,9.14083150092171,8.39300455616131,2.9397791811589,3.25874601462004,2.75765635983006,5.50579404996943,1.65993539510744,0.614426133024974,1.84640802822271,1.64677758484337,2.08365348222704,1.67509799400829,2.25105044012672,1.68078072554491,12.6690291753677,9.39653093274079,4.84638559145781,4.69502398665741,12.7715936580468,1.73918693221007,2.58127163094416,0.679971333707751,3.2382191498269,1.29955283489534,1.79210754838934,7.3031098468511,0,0,0,7.04217098883402,0,0,0,2.38140145112336,3.29367825117628,3.53867111510348,3.53970027129086,0.258937883647172,7.27366481417641,6.24547176358089,7.91610243611567,4.84292544237723,4.22023393547343,4.58595957829249,7.79132866243988,4.6967043869531,5.35017620603673,3.5384422077995,14.3972496453194,3.97514733228708,2.42437626567611,9.31958806090611,0,1.25668024088073,3.32094171771169,0,0,0,0.299581278809645,0.457500602818626,1.25654352112864,3.30266208365325,4.60287823194595,0.41557608911912,1.46017136760982,17.5163705822544,3.85661608891288,0.758168275301024,2.31486041475121,13.2722851821958,11.7250073261071,12.4242869565691,18.2352829581215,15.8525043022594,13.5800543501941,13.0245397138023,4.39795730256327,6.68260778091811,9.26619792822314,11.4368230706567,7.45265490253754,8.61946472599353,11.4923214952315,9.26019613835746,8.55847347319521,0,0.257347907114715,0,10.1491628542396,11.0227248191115,10.8037236876609,15.6251525486239,13.5767319905709,18.5120535464854,19.0677834695334,24.4128795273653,25.2213139513086,20.4054213892716,8.70087559619205,8.99863785958999,11.1111990443253,9.22110484222413,11.4075455946316,1.89260953707715,3.60166143327496,0.330418782983798,2.3800550999719,13.0105832826493,18.1144604051142,10.8248667510558,8.67239155880373,8.2279876222602,8.75037880117772,8.0669940462567,7.74085087202851,9.29940272560997,9.74886713001639,7.60359939764569,2.69645822596266,4.10662294761919,5.37681437786791,5.12103332573321,7.76889885746156,9.01661885384643,7.127796474586,7.17624202520215,9.04752076585109,4.86921335856781,3.09981310757165,4.55296310739987,4.68909222902842,2.07516838961004,2.66952169145751,2.55526693647164,0.449724224769707,1.42002084971952,0.482354319504834,2.29163266603278,1.43848068725405,1.45921704097532,1.92192989231657,4.31304619582064,4.83783231969054,2.80833905803104,6.06189307073068,0.538192240565737,0.964887042726734,4.24932337383191,13.6433816474749,10.7556884451737,14.0888421193406,9.38760993154008,12.5629693081362,10.7119638398706,18.7328301943487,16.3940549870439,21.4820748959312,22.1642128433907,7.04612253277673,8.46156411142888,9.54683786637976,0,0,3.93411418415229,7.17435540392304,0.642202359951168,1.17211686592203,29.0164853316716,24.2372090116198,16.7219356290616,19.5219372148319,30.5901224780574,33.9335693092624,33.8653984605239,35.6676428793929,19.8357243820698,21.9191893433484,22.1361155650053,1.28528526568723,7.2389443456217,17.6284947630583,20.0350960004899,15.8371318053634,5.30980553359851,9.71122544619926,8.16273603804828,5.84675747243284,4.42952839321159,11.0676653259814,8.26970538138308,7.27067458955011,9.62542921638748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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=55983 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=Q69ZS0,Q3UPS8 | |||
|association_with_transcript=-105bp_to_ENSMUST00000075994,NM_018884,uc009dcd.2,uc009dcf.1,uc012eps.1_5end | |||
|cluster_id=chr6:101327996..101328010,- | |||
|description=CAGE_peak_1_at_Pdzrn3_5end | |||
|id=chr6:101327996..101328010,- | |||
|ontology_enrichment_celltype=CL:0000107!3.03e-07!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000107,2.65e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!3.77e-12!333;UBERON:0000922!1.13e-09!328;UBERON:0004535!6.98e-09!23;UBERON:0001009!6.98e-09!23;UBERON:0007100!2.55e-08!18;UBERON:0000948!2.55e-08!18;UBERON:0005498!2.55e-08!18;UBERON:0004140!2.55e-08!18;UBERON:0009881!2.55e-08!18;UBERON:0004141!2.55e-08!18;UBERON:0003084!2.55e-08!18;UBERON:0007005!2.55e-08!18;UBERON:0004139!2.55e-08!18;UBERON:0004291!2.55e-08!18;UBERON:0002410!3.03e-07!9;UBERON:0000010!5.33e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,5.89e-09,23;UBERON:0001009,5.89e-09,23;UBERON:0007100,2.18e-08,18;UBERON:0000948,2.18e-08,18;UBERON:0005498,2.18e-08,18;UBERON:0004140,2.18e-08,18;UBERON:0009881,2.18e-08,18;UBERON:0004141,2.18e-08,18;UBERON:0003084,2.18e-08,18;UBERON:0007005,2.18e-08,18;UBERON:0004139,2.18e-08,18;UBERON:0004291,2.18e-08,18;UBERON:0002410,2.65e-07,9;UBERON:0000010,4.69e-07,11;UBERON:0000922,9.47e-07,320 | |||
|phase1_expression=11.8510146857548,0.697950815278722,0,0,0,0.33575854382378,0.233612640595526,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,3.656861476496,0,0,0,0,0,0,0.215471232685889,0.190023419456374,0,0,0,0,0,0,0,0.204169356262369,0,0,0,0,0,0,16.1147927008739,18.1464706882931,18.5382219683298,13.3006528539167,0.218025156380447,1.75748946187577,2.72201858703997,4.61955191363696,2.87505128729943,0,0,0,14.1492689819771,20.3438742356517,17.0171790451556,2.42779753031517,2.11596391708813,3.80298842103708,3.38844532069132,6.22506357277798,0,0.988866362566974,0,8.98800331555214,6.53171119046643,4.14758449233911,4.86021377994086,5.8890989178387,9.14083150092171,8.39300455616131,2.9397791811589,3.25874601462004,2.75765635983006,5.50579404996943,1.65993539510744,0.614426133024974,1.84640802822271,1.64677758484337,2.08365348222704,1.67509799400829,2.25105044012672,1.68078072554491,12.6690291753677,9.39653093274079,4.84638559145781,4.69502398665741,12.7715936580468,1.73918693221007,2.58127163094416,0.679971333707751,3.2382191498269,1.29955283489534,1.79210754838934,7.3031098468511,0,0,0,7.04217098883402,0,0,0,2.38140145112336,3.29367825117628,3.53867111510348,3.53970027129086,0.258937883647172,7.27366481417641,6.24547176358089,7.91610243611567,4.84292544237723,4.22023393547343,4.58595957829249,7.79132866243988,4.6967043869531,5.35017620603673,3.5384422077995,14.3972496453194,3.97514733228708,2.42437626567611,9.31958806090611,0,1.25668024088073,3.32094171771169,0,0,0,0.299581278809645,0.457500602818626,1.25654352112864,3.30266208365325,4.60287823194595,0.41557608911912,1.46017136760982,17.5163705822544,3.85661608891288,0.758168275301024,2.31486041475121,13.2722851821958,11.7250073261071,12.4242869565691,18.2352829581215,15.8525043022594,13.5800543501941,13.0245397138023,4.39795730256327,6.68260778091811,9.26619792822314,11.4368230706567,7.45265490253754,8.61946472599353,11.4923214952315,9.26019613835746,8.55847347319521,0,0.257347907114715,0,10.1491628542396,11.0227248191115,10.8037236876609,15.6251525486239,13.5767319905709,18.5120535464854,19.0677834695334,24.4128795273653,25.2213139513086,20.4054213892716,8.70087559619205,8.99863785958999,11.1111990443253,9.22110484222413,11.4075455946316,1.89260953707715,3.60166143327496,0.330418782983798,2.3800550999719,13.0105832826493,18.1144604051142,10.8248667510558,8.67239155880373,8.2279876222602,8.75037880117772,8.0669940462567,7.74085087202851,9.29940272560997,9.74886713001639,7.60359939764569,2.69645822596266,4.10662294761919,5.37681437786791,5.12103332573321,7.76889885746156,9.01661885384643,7.127796474586,7.17624202520215,9.04752076585109,4.86921335856781,3.09981310757165,4.55296310739987,4.68909222902842,2.07516838961004,2.66952169145751,2.55526693647164,0.449724224769707,1.42002084971952,0.482354319504834,2.29163266603278,1.43848068725405,1.45921704097532,1.92192989231657,4.31304619582064,4.83783231969054,2.80833905803104,6.06189307073068,0.538192240565737,0.964887042726734,4.24932337383191,13.6433816474749,10.7556884451737,14.0888421193406,9.38760993154008,12.5629693081362,10.7119638398706,18.7328301943487,16.3940549870439,21.4820748959312,22.1642128433907,7.04612253277673,8.46156411142888,9.54683786637976,0,0,3.93411418415229,7.17435540392304,0.642202359951168,1.17211686592203,29.0164853316716,24.2372090116198,16.7219356290616,19.5219372148319,30.5901224780574,33.9335693092624,33.8653984605239,35.6676428793929,19.8357243820698,21.9191893433484,22.1361155650053,1.28528526568723,7.2389443456217,17.6284947630583,20.0350960004899,15.8371318053634,5.30980553359851,9.71122544619926,8.16273603804828,5.84675747243284,4.42952839321159,11.0676653259814,8.26970538138308,7.27067458955011,9.62542921638748,7.9009189483954,6.32511651449993,5.15677716240934,0.340439605753788,17.4659261210371,9.31382523235832,11.7885369267376,5.85222771019503,8.74007206250146,6.2528627828806,7.91608867697958,5.16277757740163,2.1183207086382,2.64634077665954,9.8931751764888,9.20347232166662,10.5547618624273,15.3990323764046,14.4443991775654,4.66369338607761,1.48340241608408,0,9.90656966223468,6.48180845793991,0,0.136694227721025,1.14389086603261,0,0,0,5.72802370809068,12.811607740036,11.5892096262304,14.148699647656,13.381650944926,11.3548533148012,13.6212989848669,14.5470082076591,8.89970202745701,7.2584385043404,1.24267862617385,0,3.28936401296753,3.30916980914195,6.22243802700952,4.90807329215378,3.54807863530634,4.69428954583016,6.64042362704146,2.41176492179135,1.69108884578204,3.74439008135225,0.632022241256357,3.85177909051312,3.28675062927447,1.81889152168913,1.79026695667481,1.19208812868759,0.240390899039938,0.295379054349154,0.706765149637033,0.381034033274999,0.403304740547362,0.292373642219257,0.192423683280659,0.116876902181569,12.0167103316062,3.55177525398503,2.24284641523689,1.51096154727671,18.3530114330581,6.38120416534019,7.3260649706906,3.42989406526505,3.00943262421218,9.60078132449013,8.74617949363636,6.87474616127276,11.3423100346834,10.9613203163303,11.3309084608455,4.0501350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| |||
|short_description=p1@Pdzrn3 | |||
}} |
Latest revision as of 10:24, 26 September 2015
Short description: | p1@Pdzrn3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Pdzrn3_5end |
Coexpression cluster: | NA |
Association with transcript: | -105bp_to_ENSMUST00000075994, NM_018884, uc009dcd.2, uc009dcf.1, uc012eps.1_5end |
EntrezGene: | Pdzrn3 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
autonomic neuron | 2.65e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 5.89e-09 | 23 |
circulatory system | 5.89e-09 | 23 |
primary circulatory organ | 2.18e-08 | 18 |
heart | 2.18e-08 | 18 |
primitive heart tube | 2.18e-08 | 18 |
primary heart field | 2.18e-08 | 18 |
anterior lateral plate mesoderm | 2.18e-08 | 18 |
heart tube | 2.18e-08 | 18 |
heart primordium | 2.18e-08 | 18 |
cardiac mesoderm | 2.18e-08 | 18 |
cardiogenic plate | 2.18e-08 | 18 |
heart rudiment | 2.18e-08 | 18 |
autonomic nervous system | 2.65e-07 | 9 |
peripheral nervous system | 4.69e-07 | 11 |
embryo | 9.47e-07 | 320 |