FFCP PHASE1:Mm9::chr1:137180652..137180663,-: Difference between revisions
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{{FFCP|EntrezGene=215615|HGNC=|UniProt=E9PYF1,Q8VCT3,Q8BMH2|association_with_transcript=0bp_to_ENSMUST00000074357,ENSMUST00000077340,NM_001159624,NM_145417,uc007csy.2,uc011wsi.1_5end|description=CAGE_peak_2_at_Rnpep_5end|id=chr1:137180652..137180663,-|ontology_enrichment_celltype=CL:0000117!6.68e-07!23;CL:0000337!6.68e-07!23|ontology_enrichment_celltype_v019_2=CL:0000117,4.11e-07,23;CL:0000337,4.11e-07,23|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.87e-09!52;UBERON:0005068!1.87e-09!52;UBERON:0006241!1.87e-09!52;UBERON:0007135!1.87e-09!52;UBERON:0001017!3.97e-09!73;UBERON:0005743!3.97e-09!73;UBERON:0000955!1.04e-08!50;UBERON:0006238!1.04e-08!50;UBERON:0002020!1.69e-08!34;UBERON:0002616!2.61e-08!49;UBERON:0000073!4.45e-08!75;UBERON:0001016!4.45e-08!75;UBERON:0000033!6.55e-07!63|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.92e-11,54;UBERON:0001049,4.21e-10,52;UBERON:0005068,4.21e-10,52;UBERON:0006241,4.21e-10,52;UBERON:0007135,4.21e-10,52;UBERON:0001017,7.16e-10,73;UBERON:0000955,5.38e-09,47;UBERON:0006238,5.38e-09,47;UBERON:0002020,6.11e-09,34;UBERON:0001016,6.88e-09,75;UBERON:0002346,1.27e-08,64;UBERON:0003075,1.27e-08,64;UBERON:0007284,1.27e-08,64;UBERON:0002616,1.41e-08,46;UBERON:0003528,4.61e-07,29;UBERON:0002791,4.61e-07,29;UBERON:0001893,4.61e-07,29;UBERON:0010371,5.27e-07,73;UBERON:0003080,5.73e-07,40;UBERON:0002780,8.72e-07,39;UBERON:0001890,8.72e-07,39;UBERON:0006240,8.72e-07,39|phase1_expression=0.640595388419176,2.44282785347553,4.54999239389536,0.90739263392049,3.50627010962443,2.35030980676646,1.16806320297763,1.29123323441576,0,0,0.856089841127525,1.27635454392538,0.684802919724823,0.874204024189974,0.999329285446988,0.607425802169478,0.699561878128147,1.41957974411207,1.23402990245165,0,1.02051948181284,1.19149141441062,0.783599367416806,1.43993180514066,1.37645568640302,2.29692785646008,1.29228598847722,2.37018355954478,3.42042155021473,1.76421090831952,1.55211357458713,0,1.23012957516914,0,1.44425809875637,1.82858109894342,0.816677425049476,5.85944283031671,3.906676722619,4.71171369576418,3.52938892818609,5.46436387966757,4.85510353031154,3.77690453926732,3.95370031756107,3.48738829107195,3.12956537739216,2.8343270329458,1.97717564461025,3.11087838518853,2.09979632438044,0,0.671130424230945,1.45072428402269,0,1.28629718017973,1.43266719969378,0.515672092277442,3.64169629547276,3.1739458756322,1.90149421051854,1.69422266034566,1.77858959222228,3.5995988691256,0.988866362566974,4.2628806896766,4.19440154725767,2.30530983192933,1.55534418462716,2.02508907497536,1.26194976810829,2.28520787523043,4.8591079009355,2.32732518508413,2.01275489138296,2.75765635983006,1.10115880999389,2.042997409363,2.91852413186863,4.3522474950964,4.39140689291566,3.64639359389732,3.35019598801657,0.56276261003168,2.75036845998258,3.24091444021034,1.56608848879013,3.91438836233131,0.530083353332288,0.377857800533928,0.289864488701678,1.72084775396277,0.679971333707751,0,0,0.448026887097336,0.842666520790511,1.53387290320252,1.81850203222008,3.18005617059306,1.83096445709685,2.56652954828636,0,0,0.865964164044856,1.77351905832569,1.01104889002957,0.5709193985953,2.33044095282455,0.593768556259299,1.56136794089522,0.913396434936424,1.15307748628029,0.904335843315735,0.352766121407114,1.0053327306374,0.494389935468748,0.86759614151947,2.65383165584962,1.29413479957927,0.662524555381181,0.969750506270444,3.72783522436244,3.80615036115011,2.30391377494801,1.78819938646014,1.55759661857696,0.599902730993408,1.52484272487678,1.9472783122627,1.83000241127451,3.8952849154988,2.43354048269187,2.55715457330331,1.45451631191692,2.43361894601636,1.32391173005411,1.24406970610093,0.758168275301024,1.26265113531884,1.69156575851515,1.14951052216736,2.70093194708024,1.65775299619287,1.2246569847239,1.15302348256365,1.96773621575431,0.258703370739016,0.646703978798527,1.32374256117473,2.11141348996739,2.84954452155847,2.50242524303038,2.089512999133,2.67516777330327,0.796137067273973,0.702213187313235,1.02939162845886,1.70498099637356,1.24275463521301,1.64168241986767,0.540186184383045,0.946978942340841,0.983821158737019,1.3884040159864,0.930135779001631,2.14618721119695,1.16765342367169,0.493679549740441,0.985004784474571,1.05389452409612,1.02339991197733,1.3173006917463,0.536825675041487,1.68231958851302,2.26390147234426,1.65209391491899,0.793351699990633,0.853153002140936,1.39342003116263,1.80414445850931,2.42020229548011,1.11189021922435,1.14135375667535,3.79623249235609,1.4822905925161,1.50801125280162,1.59165177632921,1.75467678407208,1.79763881730844,2.59365659849633,0.995706366271836,1.70701110857774,2.05647322697512,0,1.4255592949172,0.969762435838129,1.05203729835478,1.01178459398812,1.18088118383682,1.09899109488962,0.370191491765402,0.296452627087149,1.00107063429656,1.57247196090562,0.674586337154561,0.405720242777006,0.482354319504834,0.25462585178142,1.43848068725405,0.486405680325106,0.549122826376163,1.43768206527355,0.372140947668503,1.248150692458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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=215615 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=E9PYF1,Q8VCT3,Q8BMH2 | |||
|association_with_transcript=0bp_to_ENSMUST00000074357,ENSMUST00000077340,NM_001159624,NM_145417,uc007csy.2,uc011wsi.1_5end | |||
|cluster_id=chr1:137180652..137180663,- | |||
|description=CAGE_peak_2_at_Rnpep_5end | |||
|id=chr1:137180652..137180663,- | |||
|ontology_enrichment_celltype=CL:0000117!6.68e-07!23;CL:0000337!6.68e-07!23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.11e-07,23;CL:0000337,4.11e-07,23 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.87e-09!52;UBERON:0005068!1.87e-09!52;UBERON:0006241!1.87e-09!52;UBERON:0007135!1.87e-09!52;UBERON:0001017!3.97e-09!73;UBERON:0005743!3.97e-09!73;UBERON:0000955!1.04e-08!50;UBERON:0006238!1.04e-08!50;UBERON:0002020!1.69e-08!34;UBERON:0002616!2.61e-08!49;UBERON:0000073!4.45e-08!75;UBERON:0001016!4.45e-08!75;UBERON:0000033!6.55e-07!63 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,8.92e-11,54;UBERON:0001049,4.21e-10,52;UBERON:0005068,4.21e-10,52;UBERON:0006241,4.21e-10,52;UBERON:0007135,4.21e-10,52;UBERON:0001017,7.16e-10,73;UBERON:0000955,5.38e-09,47;UBERON:0006238,5.38e-09,47;UBERON:0002020,6.11e-09,34;UBERON:0001016,6.88e-09,75;UBERON:0002346,1.27e-08,64;UBERON:0003075,1.27e-08,64;UBERON:0007284,1.27e-08,64;UBERON:0002616,1.41e-08,46;UBERON:0003528,4.61e-07,29;UBERON:0002791,4.61e-07,29;UBERON:0001893,4.61e-07,29;UBERON:0010371,5.27e-07,73;UBERON:0003080,5.73e-07,40;UBERON:0002780,8.72e-07,39;UBERON:0001890,8.72e-07,39;UBERON:0006240,8.72e-07,39 | |||
|phase1_expression=0.640595388419176,2.44282785347553,4.54999239389536,0.90739263392049,3.50627010962443,2.35030980676646,1.16806320297763,1.29123323441576,0,0,0.856089841127525,1.27635454392538,0.684802919724823,0.874204024189974,0.999329285446988,0.607425802169478,0.699561878128147,1.41957974411207,1.23402990245165,0,1.02051948181284,1.19149141441062,0.783599367416806,1.43993180514066,1.37645568640302,2.29692785646008,1.29228598847722,2.37018355954478,3.42042155021473,1.76421090831952,1.55211357458713,0,1.23012957516914,0,1.44425809875637,1.82858109894342,0.816677425049476,5.85944283031671,3.906676722619,4.71171369576418,3.52938892818609,5.46436387966757,4.85510353031154,3.77690453926732,3.95370031756107,3.48738829107195,3.12956537739216,2.8343270329458,1.97717564461025,3.11087838518853,2.09979632438044,0,0.671130424230945,1.45072428402269,0,1.28629718017973,1.43266719969378,0.515672092277442,3.64169629547276,3.1739458756322,1.90149421051854,1.69422266034566,1.77858959222228,3.5995988691256,0.988866362566974,4.2628806896766,4.19440154725767,2.30530983192933,1.55534418462716,2.02508907497536,1.26194976810829,2.28520787523043,4.8591079009355,2.32732518508413,2.01275489138296,2.75765635983006,1.10115880999389,2.042997409363,2.91852413186863,4.3522474950964,4.39140689291566,3.64639359389732,3.35019598801657,0.56276261003168,2.75036845998258,3.24091444021034,1.56608848879013,3.91438836233131,0.530083353332288,0.377857800533928,0.289864488701678,1.72084775396277,0.679971333707751,0,0,0.448026887097336,0.842666520790511,1.53387290320252,1.81850203222008,3.18005617059306,1.83096445709685,2.56652954828636,0,0,0.865964164044856,1.77351905832569,1.01104889002957,0.5709193985953,2.33044095282455,0.593768556259299,1.56136794089522,0.913396434936424,1.15307748628029,0.904335843315735,0.352766121407114,1.0053327306374,0.494389935468748,0.86759614151947,2.65383165584962,1.29413479957927,0.662524555381181,0.969750506270444,3.72783522436244,3.80615036115011,2.30391377494801,1.78819938646014,1.55759661857696,0.599902730993408,1.52484272487678,1.9472783122627,1.83000241127451,3.8952849154988,2.43354048269187,2.55715457330331,1.45451631191692,2.43361894601636,1.32391173005411,1.24406970610093,0.758168275301024,1.26265113531884,1.69156575851515,1.14951052216736,2.70093194708024,1.65775299619287,1.2246569847239,1.15302348256365,1.96773621575431,0.258703370739016,0.646703978798527,1.32374256117473,2.11141348996739,2.84954452155847,2.50242524303038,2.089512999133,2.67516777330327,0.796137067273973,0.702213187313235,1.02939162845886,1.70498099637356,1.24275463521301,1.64168241986767,0.540186184383045,0.946978942340841,0.983821158737019,1.3884040159864,0.930135779001631,2.14618721119695,1.16765342367169,0.493679549740441,0.985004784474571,1.05389452409612,1.02339991197733,1.3173006917463,0.536825675041487,1.68231958851302,2.26390147234426,1.65209391491899,0.793351699990633,0.853153002140936,1.39342003116263,1.80414445850931,2.42020229548011,1.11189021922435,1.14135375667535,3.79623249235609,1.4822905925161,1.50801125280162,1.59165177632921,1.75467678407208,1.79763881730844,2.59365659849633,0.995706366271836,1.70701110857774,2.05647322697512,0,1.4255592949172,0.969762435838129,1.05203729835478,1.01178459398812,1.18088118383682,1.09899109488962,0.370191491765402,0.296452627087149,1.00107063429656,1.57247196090562,0.674586337154561,0.405720242777006,0.482354319504834,0.25462585178142,1.43848068725405,0.486405680325106,0.549122826376163,1.43768206527355,0.372140947668503,1.24815069245824,1.26289438973556,0.717589654087649,0.482443521363367,1.84753190166605,1.70542270593436,1.79261474086228,0.848725428875941,2.11221223459652,1.67506257441816,1.6663054862021,1.36593553500459,2.04925687338048,1.55025282754142,1.43509291791738,0.81931657357869,1.20879487306127,0.867894351489069,1.50791283939272,3.80733978673097,1.47529281905711,0.827810238914197,1.60550589987792,1.52375192569864,2.13115428989678,1.00988370881749,0.315508219416257,2.73307121007647,0.646270193198397,1.43381278771531,2.00518806674155,0.849229592366497,0.809621403349789,0.584511715822624,1.97643888973262,2.89189184779626,1.13552068166615,1.6025904330053,1.14020871547503,0.329940245945071,1.32745138339963,2.18502572539483,2.72091201268276,1.50884063804718,1.18120757152309,0.614870295887855,1.55056975900933,0.363533729477506,0,0.632073515871632,1.05418608574999,2.06271086496374,1.02131881726136,1.98067203434441,2.58717367565509,2.7863814554107,1.77340233642274,0,1.64549020602121,0.608929898229199,1.17335854031855,1.0591603543191,1.10264199027481,0.98931751764888,0.968786560175433,1.32688434841943,1.43246812803764,1.80554989719567,0,1.11255181206306,1.19609616558497,1.44470807574256,0.740778109478847,0.941842285023455,0.27338845544205,1.83022538565218,1.18984900995699,1.25956307091292,0.829199842826543,1.90934123603023,1.42351197111511,2.23651413839534,1.94409613479242,1.25452977608681,1.9652630737156,0.539457385539283,0.743881101528023,1.83229159388821,1.42576470620972,1.2426786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| |||
|short_description=p2@Rnpep | |||
}} |
Latest revision as of 10:39, 26 September 2015
Short description: | p2@Rnpep |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rnpep_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENSMUST00000074357, ENSMUST00000077340, NM_001159624, NM_145417, uc007csy.2, uc011wsi.1_5end |
EntrezGene: | Rnpep |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.11e-07 | 23 |
neuroblast (sensu Vertebrata) | 4.11e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 8.92e-11 | 54 |
neural tube | 4.21e-10 | 52 |
neural rod | 4.21e-10 | 52 |
future spinal cord | 4.21e-10 | 52 |
neural keel | 4.21e-10 | 52 |
central nervous system | 7.16e-10 | 73 |
brain | 5.38e-09 | 47 |
future brain | 5.38e-09 | 47 |
gray matter | 6.11e-09 | 34 |
nervous system | 6.88e-09 | 75 |
neurectoderm | 1.27e-08 | 64 |
neural plate | 1.27e-08 | 64 |
presumptive neural plate | 1.27e-08 | 64 |
regional part of brain | 1.41e-08 | 46 |
brain grey matter | 4.61e-07 | 29 |
regional part of telencephalon | 4.61e-07 | 29 |
telencephalon | 4.61e-07 | 29 |
ecto-epithelium | 5.27e-07 | 73 |
anterior neural tube | 5.73e-07 | 40 |
regional part of forebrain | 8.72e-07 | 39 |
forebrain | 8.72e-07 | 39 |
future forebrain | 8.72e-07 | 39 |