FFCP PHASE1:Mm9::chr7:28140718..28140748,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=192192 | |EntrezGene=192192 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=100 | |||
|TSSclassifier=NA | |||
|UniProt=Q6P7W2 | |UniProt=Q6P7W2 | ||
|association_with_transcript=0bp_to_uc009fvv.1_5end | |association_with_transcript=0bp_to_uc009fvv.1_5end | ||
|cluster_id=chr7:28140718..28140748,- | |||
|description=CAGE_peak_3_at_Shkbp1_5end | |description=CAGE_peak_3_at_Shkbp1_5end | ||
|id=chr7:28140718..28140748,- | |id=chr7:28140718..28140748,- | ||
|ontology_enrichment_celltype=CL:0002319!3.29e-08!43;CL:0000221!6.87e-08!44;CL:0000133!6.87e-08!44;CL:0000055!2.89e-07!50;CL:0000540!6.50e-07!33;CL:0000047!6.50e-07!33;CL:0000031!6.50e-07!33;CL:0000404!6.50e-07!33 | |ontology_enrichment_celltype=CL:0002319!3.29e-08!43;CL:0000221!6.87e-08!44;CL:0000133!6.87e-08!44;CL:0000055!2.89e-07!50;CL:0000540!6.50e-07!33;CL:0000047!6.50e-07!33;CL:0000031!6.50e-07!33;CL:0000404!6.50e-07!33 | ||
|ontology_enrichment_celltype_v019_2=CL:0002319,8.18e-11,43;CL:0000221,2.05e-10,44;CL:0000133,2.05e-10,44;CL:0002609,8.78e-10,6;CL:0000540,1.97e-09,33;CL:0000047,1.97e-09,33;CL:0000031,1.97e-09,33;CL:0000404,1.97e-09,33;CL:0000117,3.57e-08,23;CL:0000337,3.57e-08,23;CL:0000393,5.38e-08,39;CL:0000211,5.38e-08,39 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,3.26e-07,73;UBERON:0001016,8.00e-07,75 | |||
|phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,1.33243904726265,0.404950534779652,0,0.157731082679119,0,0,0.0850432901510698,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0.837063261473815,0.7813353445238,0,0,0,0,0.377690453926732,0.405507724878058,0.367093504323363,0.782391344348039,1.30815093828268,1.31811709640683,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,1.02903774414379,0.286533439938757,0,4.24864567805155,1.5869729378161,2.53532561402472,3.04960078862219,0.889294796111139,0.449949858640699,0.988866362566974,0.7104801149461,1.19840044207362,1.92109152660777,9.64313394468842,7.83034442323806,9.67494822216357,0.571301968807607,0,8.45186514583183,4.02550978276593,3.67687514644008,0,0.127687338085188,0,5.14356522147756,1.82975287204819,4.68822033501084,0.279182999001381,0,0,0.589257170947335,0.711858403995515,1.1183966749518,0,0.302286240427142,1.15945795480671,0,0,0,0,0,0.280888840263504,1.1930122580464,0.519572009205738,0,0.14084341977668,0,0,0,0.649473123033642,1.01343946190039,0,0,0,0.148442139064825,1.21439728736295,0,0.691846491768175,0,0,0.125666591329675,0,0,0,0.647067399789637,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,5.02617408451458,0.347648640384553,0.255715457330331,0,0,0.203678727700633,0.248813941220186,0,0.420883711772948,1.04096354370163,0.229902104433473,0.540186389416048,0.150704817835715,0.204109497453984,0.12811372028485,0.562210347358373,0.258703370739016,0.646703978798527,2.26927296201383,1.75951124163949,0.43839146485515,1.11218899690239,1.0447564995665,0.205782136407943,1.59227413454795,0,0,0,1.03562886267751,1.17263029990548,1.44049649168812,0.946978942340841,0.983821158737019,0.617068451549513,0.465067889500816,0,0,0.16455984991348,0.32833492815819,0.243206428637567,0.146199987425332,0,0,0,3.80747065803352,0,0,3.41261200856374,3.25131340604614,0.902072229254653,1.00841762311671,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.779856348476481,0.898819408654221,0.216138049874694,0,2.46568271239006,2.17072173958485,1.1270773567308,1.22190796707189,0.969762435838129,0.350679099451593,1.45444035385792,0,0.156998727841375,0,0,0.333690211432188,0.786235980452812,1.12431056192427,0.202860121388503,0.482354319504834,0,0.287696137450811,0.324270453550071,0,0,0,0,0.252578877947112,0,0,0.184753190166605,2.27389694124582,1.95557971730431,1.69745085775188,1.40814148973101,0.670025029767263,0.238043640886014,0,0.315270288212382,0.8858587585951,0.318909537314974,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0.819674726883377,0.252470927204373,0.631016438832513,1.95219372148319,1.93881057959519,1.43381278771531,0.668396022247182,1.13230612315533,1.21443210502468,0.584511715822624,0.790575555893047,0.321321316421807,0.141940085208269,1.24645922567079,0.81443479676788,0.659880491890142,0,0.971122544619926,0.604647113929502,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,3.06103859853227,1.55230420539305,1.28602221018955,0.886701168211368,0.535106452806212,0.493647061806363,0.304464949114599,0.23467170806371,0,0,0.49465875882444,0.161464426695906,0.361877549568935,0.358117032009409,0.164140899745061,0.582961673259701,0,1.02522528478712,0.82554747185289,0.925972636848558,0.565105371014073,0.410082683163076,0.228778173206523,0,0.279902904647316,0.138199973804424,0,3.95419991976419,2.03319467126849,1.83609079397062,2.29997125615916,0.655087691238533,0.269728692769641,0.495920734352016,0.26175594198403,0.259229946583586,0,0,0.747582730219894,1.32366792365678,0.972255941720238,1.03327858782185,0.675824501963113,0.117357238645754,0.2604087696879,0,0,0.288030006257865,0,1.41907650703115,0.718976700153791,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.403865799792591,0.15241361331,0,0,0.0962118416403295,0,0.226730383615211,0,0.0897138566094757,0.503653849092235,0,0.187682475451182,0.36630324853453,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0.453142408984205,0.51776031175182,2.17953429926771,2.39414924040619,2.90247129782028,1.21553358534147,0.838452650511929,0.367687016900028,0.666740183404846,0.618105171716683,0.962757628775446,0.505394423527595,1.2673964994512,0.565879024158229,0.468207537349412,0.640251524048693,0.804096565378586,0.476293691283074,0.695305955669133,1.15745532278223,0.412085900803307,0.441596760403192,0.685738504770831,1.4198064492747,0.238436189947321,0.581385666529314,0.282328141245992,0.507687647350059,0.548783918618318,0.263069711437843,1.08643291076689,0.561142271657738,1.06771516311757,0.886540341380071,0.409231043169689,0.929621047115796,0.771626443924566,2.24829520144151,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | |phase1_expression=0.320297694209588,0.348975407639361,0,0,0,0,0,0,0,0,0,0,0.171200729931206,0,1.33243904726265,0.404950534779652,0,0.157731082679119,0,0,0.0850432901510698,0.297872853602656,0,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0.166234645358492,0,0.837063261473815,0.7813353445238,0,0,0,0,0.377690453926732,0.405507724878058,0.367093504323363,0.782391344348039,1.30815093828268,1.31811709640683,0.388859798148567,0.279972843250725,1.43752564364972,0,0,0,1.02903774414379,0.286533439938757,0,4.24864567805155,1.5869729378161,2.53532561402472,3.04960078862219,0.889294796111139,0.449949858640699,0.988866362566974,0.7104801149461,1.19840044207362,1.92109152660777,9.64313394468842,7.83034442323806,9.67494822216357,0.571301968807607,0,8.45186514583183,4.02550978276593,3.67687514644008,0,0.127687338085188,0,5.14356522147756,1.82975287204819,4.68822033501084,0.279182999001381,0,0,0.589257170947335,0.711858403995515,1.1183966749518,0,0.302286240427142,1.15945795480671,0,0,0,0,0,0.280888840263504,1.1930122580464,0.519572009205738,0,0.14084341977668,0,0,0,0.649473123033642,1.01343946190039,0,0,0,0.148442139064825,1.21439728736295,0,0.691846491768175,0,0,0.125666591329675,0,0,0,0.647067399789637,0.220841518460394,0,0,0,0,0,0,0,0,0.149790639404823,0,5.02617408451458,0.347648640384553,0.255715457330331,0,0,0.203678727700633,0.248813941220186,0,0.420883711772948,1.04096354370163,0.229902104433473,0.540186389416048,0.150704817835715,0.204109497453984,0.12811372028485,0.562210347358373,0.258703370739016,0.646703978798527,2.26927296201383,1.75951124163949,0.43839146485515,1.11218899690239,1.0447564995665,0.205782136407943,1.59227413454795,0,0,0,1.03562886267751,1.17263029990548,1.44049649168812,0.946978942340841,0.983821158737019,0.617068451549513,0.465067889500816,0,0,0.16455984991348,0.32833492815819,0.243206428637567,0.146199987425332,0,0,0,3.80747065803352,0,0,3.41261200856374,3.25131340604614,0.902072229254653,1.00841762311671,0.22237804384487,0.380451252225118,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.779856348476481,0.898819408654221,0.216138049874694,0,2.46568271239006,2.17072173958485,1.1270773567308,1.22190796707189,0.969762435838129,0.350679099451593,1.45444035385792,0,0.156998727841375,0,0,0.333690211432188,0.786235980452812,1.12431056192427,0.202860121388503,0.482354319504834,0,0.287696137450811,0.324270453550071,0,0,0,0,0.252578877947112,0,0,0.184753190166605,2.27389694124582,1.95557971730431,1.69745085775188,1.40814148973101,0.670025029767263,0.238043640886014,0,0.315270288212382,0.8858587585951,0.318909537314974,0.163863314715738,0.172684981865896,0.433947175744535,0,0,0,0,0,0,0.819674726883377,0.252470927204373,0.631016438832513,1.95219372148319,1.93881057959519,1.43381278771531,0.668396022247182,1.13230612315533,1.21443210502468,0.584511715822624,0.790575555893047,0.321321316421807,0.141940085208269,1.24645922567079,0.81443479676788,0.659880491890142,0,0.971122544619926,0.604647113929502,0.377210159511796,0.295301892880773,0.307435147943927,0.258428293168221,0.363533729477506,0,0,0,0,0.340439605753788,3.06103859853227,1.55230420539305,1.28602221018955,0.886701168211368,0.535106452806212,0.493647061806363,0.304464949114599,0.23467170806371,0,0,0.49465875882444,0.161464426695906,0.361877549568935,0.358117032009409,0.164140899745061,0.582961673259701,0,1.02522528478712,0.82554747185289,0.925972636848558,0.565105371014073,0.410082683163076,0.228778173206523,0,0.279902904647316,0.138199973804424,0,3.95419991976419,2.03319467126849,1.83609079397062,2.29997125615916,0.655087691238533,0.269728692769641,0.495920734352016,0.26175594198403,0.259229946583586,0,0,0.747582730219894,1.32366792365678,0.972255941720238,1.03327858782185,0.675824501963113,0.117357238645754,0.2604087696879,0,0,0.288030006257865,0,1.41907650703115,0.718976700153791,0.129920822977795,0.179026695667481,0.198681354781265,0.120195449519969,0.147689527174577,0.403865799792591,0.15241361331,0,0,0.0962118416403295,0,0.226730383615211,0,0.0897138566094757,0.503653849092235,0,0.187682475451182,0.36630324853453,0,0,0,0.460325236507177,0,0.171853182343688,0,0,0,0,0.453142408984205,0.51776031175182,2.17953429926771,2.39414924040619,2.90247129782028,1.21553358534147,0.838452650511929,0.367687016900028,0.666740183404846,0.618105171716683,0.962757628775446,0.505394423527595,1.2673964994512,0.565879024158229,0.468207537349412,0.640251524048693,0.804096565378586,0.476293691283074,0.695305955669133,1.15745532278223,0.412085900803307,0.441596760403192,0.685738504770831,1.4198064492747,0.238436189947321,0.581385666529314,0.282328141245992,0.507687647350059,0.548783918618318,0.263069711437843,1.08643291076689,0.561142271657738,1.06771516311757,0.886540341380071,0.409231043169689,0.929621047115796,0.771626443924566,2.24829520144151,0,0.214871054048298,0.191288332068843,0,0.231867835620421 | ||
|short_description=p3@Shkbp1 | |short_description=p3@Shkbp1 | ||
}} | }} |
Latest revision as of 11:41, 26 September 2015
Short description: | p3@Shkbp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Shkbp1_5end |
Coexpression cluster: | MCL_coexpression_mm9:100 |
Association with transcript: | 0bp_to_uc009fvv.1_5end |
EntrezGene: | Shkbp1 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 8.18e-11 | 43 |
ectodermal cell | 2.05e-10 | 44 |
neurectodermal cell | 2.05e-10 | 44 |
neuron of cerebral cortex | 8.78e-10 | 6 |
neuron | 1.97e-09 | 33 |
neuronal stem cell | 1.97e-09 | 33 |
neuroblast | 1.97e-09 | 33 |
electrically signaling cell | 1.97e-09 | 33 |
CNS neuron (sensu Vertebrata) | 3.57e-08 | 23 |
neuroblast (sensu Vertebrata) | 3.57e-08 | 23 |
electrically responsive cell | 5.38e-08 | 39 |
electrically active cell | 5.38e-08 | 39 |
Ontology term | p-value | n |
---|---|---|
central nervous system | 3.26e-07 | 73 |
nervous system | 8.00e-07 | 75 |