Personal tools

FFCP PHASE1:Mm9::chr15:101054648..101054662,+: Difference between revisions

From FANTOM5_SSTAR

Jump to: navigation, search
No edit summary
No edit summary
 
(5 intermediate revisions by the same user not shown)
Line 1: Line 1:
{{FFCP
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=56149
|EntrezGene=56149
|HGNC=
|HGNC=
|MCL_coexpression_id=7
|TSSclassifier=NA
|UniProt=Q9JJA9
|UniProt=Q9JJA9
|association_with_transcript=10bp_to_ENSMUST00000000543,NM_019518,uc007xsu.1_5end
|association_with_transcript=10bp_to_ENSMUST00000000543,NM_019518,uc007xsu.1_5end
|cluster_id=chr15:101054648..101054662,+
|description=CAGE_peak_1_at_Grasp_5end
|description=CAGE_peak_1_at_Grasp_5end
|id=chr15:101054648..101054662,+
|id=chr15:101054648..101054662,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0005178!2.17e-09!17;UBERON:0005181!2.17e-09!17;UBERON:0002224!2.17e-09!17;UBERON:0000915!2.17e-09!17;UBERON:0008947!2.17e-09!17;UBERON:0003258!2.17e-09!17;UBERON:0000464!2.74e-09!57;UBERON:0002048!9.03e-08!14;UBERON:0000117!9.03e-08!14;UBERON:0000171!9.03e-08!14;UBERON:0000170!9.03e-08!14;UBERON:0005597!9.03e-08!14;UBERON:0000118!9.03e-08!14;UBERON:0002021!8.90e-07!10;UBERON:0000411!8.90e-07!10;UBERON:0001950!8.90e-07!10
|ontology_enrichment_uberon_v019_2=UBERON:0005178,2.17e-09,17;UBERON:0005181,2.17e-09,17;UBERON:0002224,2.17e-09,17;UBERON:0000915,2.17e-09,17;UBERON:0008947,2.17e-09,17;UBERON:0003258,2.17e-09,17;UBERON:0002048,9.03e-08,14;UBERON:0000117,9.03e-08,14;UBERON:0000171,9.03e-08,14;UBERON:0000170,9.03e-08,14;UBERON:0005597,9.03e-08,14;UBERON:0000118,9.03e-08,14;UBERON:0002021,8.90e-07,10;UBERON:0000411,8.90e-07,10;UBERON:0001950,8.90e-07,10
|phase1_expression=35.2327463630547,12.2141392673776,17.7449703361919,19.9626379462508,25.5456822272637,41.2983008903249,37.1444098546886,13.2997023144824,219.771195278752,375.439500220478,26.8812210114043,31.9088635981346,7.01922992717943,8.47977903464275,1.66554880907831,1.61980213911861,2.09868563438444,3.15462165358238,3.83920414096069,3.81950686618227,24.4924675635081,27.1064296778417,23.2467812333652,23.3588937278374,18.1233332043064,12.6331032105304,11.630573896295,17.453169847557,16.3420140732482,5.29263272495855,17.9601713630797,3.17515336729816,1.84519436275371,0,10.9763615505484,5.48574329683025,25.1128308202714,0,0.7813353445238,0.523523743973798,0,0,0.485510353031154,20.1434908760924,26.0538713234152,15.2343804294196,32.8604364626176,3.48840250208714,7.24964403023757,3.4997381833371,22.2578410384326,4.31257693094915,47.3146949082817,31.9159342484992,56.463758255934,35.5018021729607,31.5186783932632,19.5955395065428,3.84401275633236,3.70293685490423,5.70448263155561,20.6695164562171,23.1216646988896,2.2497492932035,1.97773272513395,1.4209602298922,10.7856039786626,5.37905627450176,4.14758449233911,4.18518408828241,6.30974884054146,7.42692559449889,9.93908434282261,3.79721477566358,2.39613677545591,4.5960939330501,8.8092704799511,10.853423737241,7.52672012955593,1.97829431595291,3.11057988248193,6.25096044668112,4.4669279840221,9.00420176050688,6.1119299110724,11.1958862479994,8.11518580554887,2.79599168737951,9.61722655331437,20.2531781086185,155.947094921503,24.9522924324602,1.3599426674155,0.539703191637817,3.24888208723835,4.48026887097336,10.3928870897496,12.4414135481982,15.846946280775,11.3068663843309,49.5768837613915,14.115912515575,7.64415719119937,14.2213340630666,70.5760793696558,58.2727690592727,66.7292267419514,9.93399753555822,9.83963957859253,47.5014845007439,19.4303565978072,16.7456013071678,14.2981608298756,14.770818774157,31.5137735123689,30.5369816931111,17.7980376768749,25.0156887471447,2.65383165584962,18.7649545938995,17.6673214768315,12.1218813283806,14.9113408974498,7.02673912827713,5.86450779077674,7.66371165625774,60.6264529999957,22.1964010467561,36.7232956241157,12.5824137100051,96.0751265919116,11.5602003943835,77.6994711259476,88.221832778964,15.3763152974074,47.8611726049885,31.7738815212987,17.416975885413,4.54900965180614,6.94458124425364,14.7036100547855,17.9323641458109,18.3663372401456,11.3028613376786,15.5123218065028,9.99287018221828,9.46387418053261,11.1242449417777,29.5328150317994,34.9846248310466,29.9116911078713,26.0842921588814,31.6973864117182,35.521720985261,35.8060917349822,29.855140022774,11.937624184325,7.20574139921202,7.95657798307659,17.8128164380532,21.3418714582798,17.4660199617184,23.4377288229358,17.9055450890137,16.9693824176116,11.6266972375204,12.6088498657821,23.1195377886996,19.9117418395311,26.9234641089716,35.5081385810848,35.8189969192064,36.0062189077323,38.6514486029871,77.1764111230347,9.15851050175631,2.64335026387038,7.1401652999157,16.8497717922835,16.7210403739516,18.6857818917035,15.5296313959974,10.8965241483986,14.4571475845545,5.21981967698963,10.0466362381647,12.5667604400135,15.9165177632921,12.2827374885046,8.98819408654222,5.40345124686736,12.1476176685164,18.9667900953082,16.9087798662399,21.4144697778853,18.124968178233,19.5892012039302,32.7534278887788,24.0298841072178,13.8753539100826,14.1298855057237,25.7900072596563,6.81841042300442,4.00428253718626,3.14494392181125,1.79889689907883,3.44862206360455,2.65294875727659,5.60176873919124,4.60313819921297,7.45822043165163,4.11842119782122,15.814502718009,13.7692150637346,9.98520553966594,6.31447194867779,4.4849353380478,5.78932225636041,66.3263952698111,22.9284608242287,36.1782247701297,34.6279974981384,41.3054836987764,53.602002381381,60.2250411441615,84.2977358745691,79.1328423413079,69.3184478600666,77.1761080302238,66.2007791451582,50.7693846685733,72.6138274079188,0,0,4.42587845717133,9.93372286697037,9.15138362930414,11.8383803458125,14.0984053023941,28.5292147740941,11.6738041184015,11.3227235846025,13.5716740571663,18.6395662402991,16.0415045339324,14.7199796010193,12.5491317519217,12.2747460322751,13.0444966722353,98.324322825073,36.7624820689416,41.3112200508032,39.0928702448583,39.2628892674634,35.84118735179,41.5154887825018,39.3020624054176,73.5559811048003,86.8187565069472,61.1795944408416,37.7305308025603,35.6263054887955,45.6316644332443,37.9244109522979,39.0048851727495,48.4737053266478,10.5536277783674,15.1251318986301,25.4836607052026,23.3627368184436,19.1527452333655,13.0209236849512,18.2649412868354,21.0080814889074,10.0908834467395,35.7996199759856,5.73373834942901,27.3711179882857,68.6223813457598,31.9658502119226,20.6514155125426,31.8433345505419,6.12109756922687,10.0129663085675,4.10090113914846,22.4961686079913,11.8524497516615,5.46268525313604,3.41735569302563,3.43167259809784,66.2915876976036,72.3549008513312,69.0999869022119,14.3200592702267,18.663823621287,30.7012395361542,20.3050040744986,19.8633881213745,17.4690050996942,13.6212989848669,19.4235620954539,9.6849698534091,16.2018716614741,5.59205381778233,5.07323644815771,34.986871774291,34.5808245055334,51.9184672878607,38.4896273963639,51.7005744001781,59.9695489479803,38.0196803744334,17.6163698635194,7.9722759872582,6.91272015018877,5.68820017130721,11.9607877021197,12.5307367741089,12.8621614748017,10.3835483487139,12.3182439964384,7.69250876927801,6.35064966850682,5.35122184725182,8.53516234535998,7.15865914471568,9.84324595471499,5.96513418170043,9.58390597888865,15.1909357022192,9.98936790183291,21.8901810127121,30.2192309455341,12.7505132061246,15.3899629869969,39.1944475931947,21.8655746660647,5.517293144389,39.5326289831947,48.3341498332536,47.5503276154699,57.0552565381043,76.0441596945413,55.1437545094481,76.2775425261941,73.4023561255479,97.8787603405882,87.5014926860576,15.0491653997056,25.537591897666,22.1953687480374,18.2330037801221,23.89590053959,22.7965950478018,23.5581531469712,26.3724873265785,24.0689407193861,25.2697211763797,20.7853025909997,26.0304351112785,23.5976598824104,21.0002499887971,20.5044624171539,18.5754539600399,22.8292122111365,19.8696497077616,21.4284668417719,20.9022466590844,23.6579784145937,20.5871935144832,21.9361294751535,23.5461194944372,21.645157495526,22.8459441307527,20.4879329617505,17.8887403777733,18.4693594830372,21.8845485946518,23.3710985704623,19.6023919927371,18.0061658994663,21.5362209248493,28.1643652032466,29.7274587746156,27.3699981881128,36.0983370801141,38.2576664137687,21.6179590737125,22.4911800551809
|phase1_expression=35.2327463630547,12.2141392673776,17.7449703361919,19.9626379462508,25.5456822272637,41.2983008903249,37.1444098546886,13.2997023144824,219.771195278752,375.439500220478,26.8812210114043,31.9088635981346,7.01922992717943,8.47977903464275,1.66554880907831,1.61980213911861,2.09868563438444,3.15462165358238,3.83920414096069,3.81950686618227,24.4924675635081,27.1064296778417,23.2467812333652,23.3588937278374,18.1233332043064,12.6331032105304,11.630573896295,17.453169847557,16.3420140732482,5.29263272495855,17.9601713630797,3.17515336729816,1.84519436275371,0,10.9763615505484,5.48574329683025,25.1128308202714,0,0.7813353445238,0.523523743973798,0,0,0.485510353031154,20.1434908760924,26.0538713234152,15.2343804294196,32.8604364626176,3.48840250208714,7.24964403023757,3.4997381833371,22.2578410384326,4.31257693094915,47.3146949082817,31.9159342484992,56.463758255934,35.5018021729607,31.5186783932632,19.5955395065428,3.84401275633236,3.70293685490423,5.70448263155561,20.6695164562171,23.1216646988896,2.2497492932035,1.97773272513395,1.4209602298922,10.7856039786626,5.37905627450176,4.14758449233911,4.18518408828241,6.30974884054146,7.42692559449889,9.93908434282261,3.79721477566358,2.39613677545591,4.5960939330501,8.8092704799511,10.853423737241,7.52672012955593,1.97829431595291,3.11057988248193,6.25096044668112,4.4669279840221,9.00420176050688,6.1119299110724,11.1958862479994,8.11518580554887,2.79599168737951,9.61722655331437,20.2531781086185,155.947094921503,24.9522924324602,1.3599426674155,0.539703191637817,3.24888208723835,4.48026887097336,10.3928870897496,12.4414135481982,15.846946280775,11.3068663843309,49.5768837613915,14.115912515575,7.64415719119937,14.2213340630666,70.5760793696558,58.2727690592727,66.7292267419514,9.93399753555822,9.83963957859253,47.5014845007439,19.4303565978072,16.7456013071678,14.2981608298756,14.770818774157,31.5137735123689,30.5369816931111,17.7980376768749,25.0156887471447,2.65383165584962,18.7649545938995,17.6673214768315,12.1218813283806,14.9113408974498,7.02673912827713,5.86450779077674,7.66371165625774,60.6264529999957,22.1964010467561,36.7232956241157,12.5824137100051,96.0751265919116,11.5602003943835,77.6994711259476,88.221832778964,15.3763152974074,47.8611726049885,31.7738815212987,17.416975885413,4.54900965180614,6.94458124425364,14.7036100547855,17.9323641458109,18.3663372401456,11.3028613376786,15.5123218065028,9.99287018221828,9.46387418053261,11.1242449417777,29.5328150317994,34.9846248310466,29.9116911078713,26.0842921588814,31.6973864117182,35.521720985261,35.8060917349822,29.855140022774,11.937624184325,7.20574139921202,7.95657798307659,17.8128164380532,21.3418714582798,17.4660199617184,23.4377288229358,17.9055450890137,16.9693824176116,11.6266972375204,12.6088498657821,23.1195377886996,19.9117418395311,26.9234641089716,35.5081385810848,35.8189969192064,36.0062189077323,38.6514486029871,77.1764111230347,9.15851050175631,2.64335026387038,7.1401652999157,16.8497717922835,16.7210403739516,18.6857818917035,15.5296313959974,10.8965241483986,14.4571475845545,5.21981967698963,10.0466362381647,12.5667604400135,15.9165177632921,12.2827374885046,8.98819408654222,5.40345124686736,12.1476176685164,18.9667900953082,16.9087798662399,21.4144697778853,18.124968178233,19.5892012039302,32.7534278887788,24.0298841072178,13.8753539100826,14.1298855057237,25.7900072596563,6.81841042300442,4.00428253718626,3.14494392181125,1.79889689907883,3.44862206360455,2.65294875727659,5.60176873919124,4.60313819921297,7.45822043165163,4.11842119782122,15.814502718009,13.7692150637346,9.98520553966594,6.31447194867779,4.4849353380478,5.78932225636041,66.3263952698111,22.9284608242287,36.1782247701297,34.6279974981384,41.3054836987764,53.602002381381,60.2250411441615,84.2977358745691,79.1328423413079,69.3184478600666,77.1761080302238,66.2007791451582,50.7693846685733,72.6138274079188,0,0,4.42587845717133,9.93372286697037,9.15138362930414,11.8383803458125,14.0984053023941,28.5292147740941,11.6738041184015,11.3227235846025,13.5716740571663,18.6395662402991,16.0415045339324,14.7199796010193,12.5491317519217,12.2747460322751,13.0444966722353,98.324322825073,36.7624820689416,41.3112200508032,39.0928702448583,39.2628892674634,35.84118735179,41.5154887825018,39.3020624054176,73.5559811048003,86.8187565069472,61.1795944408416,37.7305308025603,35.6263054887955,45.6316644332443,37.9244109522979,39.0048851727495,48.4737053266478,10.5536277783674,15.1251318986301,25.4836607052026,23.3627368184436,19.1527452333655,13.0209236849512,18.2649412868354,21.0080814889074,10.0908834467395,35.7996199759856,5.73373834942901,27.3711179882857,68.6223813457598,31.9658502119226,20.6514155125426,31.8433345505419,6.12109756922687,10.0129663085675,4.10090113914846,22.4961686079913,11.8524497516615,5.46268525313604,3.41735569302563,3.43167259809784,66.2915876976036,72.3549008513312,69.0999869022119,14.3200592702267,18.663823621287,30.7012395361542,20.3050040744986,19.8633881213745,17.4690050996942,13.6212989848669,19.4235620954539,9.6849698534091,16.2018716614741,5.59205381778233,5.07323644815771,34.986871774291,34.5808245055334,51.9184672878607,38.4896273963639,51.7005744001781,59.9695489479803,38.0196803744334,17.6163698635194,7.9722759872582,6.91272015018877,5.68820017130721,11.9607877021197,12.5307367741089,12.8621614748017,10.3835483487139,12.3182439964384,7.69250876927801,6.35064966850682,5.35122184725182,8.53516234535998,7.15865914471568,9.84324595471499,5.96513418170043,9.58390597888865,15.1909357022192,9.98936790183291,21.8901810127121,30.2192309455341,12.7505132061246,15.3899629869969,39.1944475931947,21.8655746660647,5.517293144389,39.5326289831947,48.3341498332536,47.5503276154699,57.0552565381043,76.0441596945413,55.1437545094481,76.2775425261941,73.4023561255479,97.8787603405882,87.5014926860576,15.0491653997056,25.537591897666,22.1953687480374,18.2330037801221,23.89590053959,22.7965950478018,23.5581531469712,26.3724873265785,24.0689407193861,25.2697211763797,20.7853025909997,26.0304351112785,23.5976598824104,21.0002499887971,20.5044624171539,18.5754539600399,22.8292122111365,19.8696497077616,21.4284668417719,20.9022466590844,23.6579784145937,20.5871935144832,21.9361294751535,23.5461194944372,21.645157495526,22.8459441307527,20.4879329617505,17.8887403777733,18.4693594830372,21.8845485946518,23.3710985704623,19.6023919927371,18.0061658994663,21.5362209248493,28.1643652032466,29.7274587746156,27.3699981881128,36.0983370801141,38.2576664137687,21.6179590737125,22.4911800551809
|short_description=p1@Grasp
|short_description=p1@Grasp
}}
}}

Latest revision as of 12:42, 26 September 2015

Short description:p1@Grasp
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Grasp_5end
Coexpression cluster:MCL_coexpression_mm9:7
Association with transcript: 10bp_to_ENSMUST00000000543, NM_019518, uc007xsu.1_5end
EntrezGene:Grasp
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p1@Grasp

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G735.23
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I512.21
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I617.74
CD326+ enterocyte, pool1.CNhs13542.11848-124I319.96
CD326+ enterocyte, pool2.CNhs13197.11849-124I425.55
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I741.30
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I837.14
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E913.30
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E7219.77
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F2375.44
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E626.88
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F131.91
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E47.02
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E88.48
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A11.67
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A31.62
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A52.10
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A23.15
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A43.84
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A63.82
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A324.49
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H227.11
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I923.25
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D123.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D218.12
GP2+ M cell, pool1.CNhs13228.11845-124H912.63
GP2+ M cell, pool2.CNhs13231.11846-124I111.63
GP2+ M cell, pool3.CNhs13240.11847-124I217.45
Ileum epithelium, pool1.CNhs13199.10252-104B916.34
Ileum epithelium, pool2.CNhs13232.10253-104C15.29
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C817.96
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I33.18
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G61.85
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F510.98
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.49
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F725.11
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.78
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.52
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.49
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D820.14
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D926.05
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B315.23
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B732.86
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C23.49
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.25
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C33.50
Mouse Astrocytes, donor2.CNhs12078.11552-120C422.26
Mouse Astrocytes, donor3.CNhs12107.11633-122C44.31
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A247.31
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I931.92
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A156.46
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C135.50
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E131.52
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C519.60
Mouse Granule cells, donor1.CNhs12131.11713-123C33.84
Mouse Granule cells, donor2.CNhs12357.11731-123E33.70
Mouse Granule cells, donor3.CNhs12108.11636-122C75.70
Mouse Meningeal cells, donor1.CNhs12132.11716-123C620.67
Mouse Meningeal cells, donor3.CNhs12109.11639-122D123.12
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C72.25
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E71.98
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D21.42
Mouse Microglia, donor1.CNhs12629.11718-123C810.79
Mouse Microglia, donor2.CNhs12634.11736-123E85.38
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D54.15
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F54.19
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D96.31
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F17.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D59.94
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D23.80
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F22.40
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D64.60
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D38.81
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F310.85
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D77.53
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F43.11
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D86.25
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E44.47
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E59.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I66.11
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D611.20
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F68.12
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E12.80
Mouse Schwann, donor1.CNhs12507.11728-123D99.62
Mouse Schwann, donor2.CNhs12573.11746-123F920.25
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G3155.95
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F724.95
Mouse hepatocyte, donor1.CNhs13078.11714-123C41.36
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.54
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.48
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A710.39
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I712.44
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E315.85
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I811.31
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G649.58
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H114.12
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I87.64
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B614.22
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G170.58
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G258.27
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G366.73
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B69.93
accessory axillary lymph node, adult.CNhs10475.1063-29H99.84
adrenal gland, adult.CNhs10508.49-24D747.50
adrenal gland, embryo E14.CNhs11038.406-44C519.43
adrenal gland, embryo E16.CNhs11004.1254-43D616.75
adrenal gland, embryo E17.CNhs11043.1263-45I114.30
adrenal gland, embryo E18.CNhs11026.1262-18F514.77
adrenal gland, neonate N00.CNhs11191.1311-23C131.51
adrenal gland, neonate N25.CNhs11223.1377-27I330.54
amnion, adult pregnant day17.5.CNhs10488.583-22A817.80
aorta, adult.CNhs10498.46-23H125.02
bone (os femoris), adult.CNhs10483.56-12G22.65
bone (os femoris), neonate N02.CNhs11227.1985-43F518.76
bone (os femoris), neonate N16.CNhs11225.1525-43A617.67
bone (os femoris), neonate N20.CNhs11195.1350-25C312.12
cecum, adult.CNhs10467.37-13H414.91
cerebellum, adult.CNhs10494.15-8B27.03
cerebellum, neonate N30.CNhs11135.1395-42I25.86
colon, adult.CNhs10468.36-18H77.66
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C760.63
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D122.20
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D436.72
corpora quadrigemina, adult.CNhs10501.16-22A412.58
corpus striatum, adult.CNhs10487.19-21D896.08
corpus striatum, neonate N00.CNhs11226.630-43F111.56
cortex, adult.CNhs10473.12-14D577.70
cortex, neonate N30.CNhs11107.1392-42F288.22
diencephalon, adult.CNhs10482.20-12F215.38
diencephalon, neonate N30.CNhs11201.1388-42B247.86
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B131.77
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A217.42
epididymis, adult.CNhs10490.58-23B24.55
eyeball, adult.CNhs10484.31-12G46.94
eyeball, embryo E12.CNhs11016.345-16C614.70
eyeball, embryo E14.CNhs10521.399-16E217.93
eyeball, embryo E15.CNhs10593.426-16C918.37
eyeball, embryo E17.CNhs11023.1261-18D411.30
eyeball, neonate N00.CNhs11207.633-15C615.51
eyeball, neonate N01.CNhs11140.1532-43E79.99
eyeball, neonate N02.CNhs11205.1551-44G89.46
eyeball, neonate N16.CNhs11188.777-19A211.12
forelimb, embryo E11.CNhs10596.335-25E229.53
forelimb, embryo E12.CNhs10600.359-14H234.98
forelimb, embryo E13.CNhs10589.384-1E229.91
forelimb, embryo E14.CNhs10577.413-26A826.08
forelimb, embryo E15.CNhs11007.437-20E731.70
forelimb, embryo E17.CNhs10598.1517-43C435.52
forelimb, embryo E18.CNhs11008.1520-43B535.81
gonad, embryo E13.CNhs11044.1564-45I629.86
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C811.94
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.21
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D57.96
heart, embryo E11.CNhs10586.331-24E917.81
heart, embryo E12.CNhs11015.353-12F521.34
heart, embryo E13.CNhs11013.376-3I917.47
heart, embryo E14.CNhs10597.403-26D423.44
heart, embryo E15.CNhs11017.431-16C817.91
heart, embryo E16.CNhs11021.457-17C616.97
heart, embryo E17.CNhs11025.479-18E511.63
heart, embryo E18.CNhs11030.1283-20G312.61
heart, neonate N00.CNhs11213.639-21E323.12
heart, neonate N03.CNhs11221.1349-25I219.91
heart, neonate N10.CNhs11118.749-24G126.92
heart, neonate N16.CNhs11209.782-15G135.51
heart, neonate N20.CNhs11127.821-26I635.82
heart, neonate N25.CNhs11196.1351-25D336.01
heart, neonate N30.CNhs11202.1390-42D238.65
hippocampus, adult.CNhs10478.13-16E877.18
hippocampus, neonate N00.CNhs11228.627-43G19.16
intestinal mucosa, adult.CNhs10506.860-29I32.64
intestine, adult.CNhs10496.178-9A37.14
intestine, embryo E12.CNhs11019.1251-16I516.85
intestine, embryo E13.CNhs11010.381-16D516.72
intestine, embryo E15.CNhs10602.976-16D818.69
intestine, embryo E16.CNhs10585.463-22H415.53
intestine, embryo E17.CNhs10582.482-18D310.90
intestine, embryo E18.CNhs10526.1289-20F714.46
intestine, neonate N00.CNhs11126.644-26D15.22
intestine, neonate N01.CNhs11192.1322-23E910.05
intestine, neonate N06.CNhs11102.688-20B812.57
intestine, neonate N07.CNhs11095.720-20F215.92
intestine, neonate N10.CNhs11098.755-23A512.28
intestine, neonate N20.CNhs11187.827-18D18.99
intestine, neonate N25.CNhs11121.1352-25E35.40
intestine, neonate N30.CNhs11131.1384-42G112.15
kidney, embryo E14.CNhs10606.411-4I918.97
kidney, embryo E15.CNhs10997.434-16F816.91
kidney, embryo E16.CNhs10584.464-22A521.41
kidney, embryo E17.CNhs11028.483-18I218.12
kidney, embryo E18.CNhs11001.1288-20C719.59
kidney, neonate N00.CNhs11214.646-21G732.75
kidney, neonate N10.CNhs11206.758-6D524.03
kidney, neonate N20.CNhs11113.832-19I113.88
kidney, neonate N25.CNhs11122.1353-25F314.13
kidney, neonate N30.CNhs11203.1385-42H125.79
liver, adult pregnant day01.CNhs10466.508-5B26.82
liver, embryo E12.CNhs10601.355-15F84.00
liver, embryo E13.CNhs10524.378-3H63.14
liver, embryo E14.CNhs10594.409-16E11.80
liver, embryo E15.CNhs10520.433-16D73.45
liver, embryo E16.CNhs10523.462-17F52.65
liver, embryo E17.CNhs10510.481-18A35.60
liver, embryo E18.CNhs10579.499-43G44.60
liver, neonate N00.CNhs11117.641-24F47.46
liver, neonate N03.CNhs11123.1345-25G24.12
liver, neonate N06.CNhs11101.684-20A815.81
liver, neonate N07.CNhs11103.716-20H213.77
liver, neonate N10.CNhs11115.751-24B99.99
liver, neonate N20.CNhs11220.823-25A36.31
liver, neonate N25.CNhs11198.1368-26H14.48
liver, neonate N30.CNhs11106.1382-42D15.79
lung, adult.CNhs10474.28-22B166.33
lung, embryo E12.CNhs10522.354-16G222.93
lung, embryo E14.CNhs10604.404-26F836.18
lung, embryo E15.CNhs11020.432-17C534.63
lung, embryo E16.CNhs10998.458-17B641.31
lung, embryo E17.CNhs10605.480-44A653.60
lung, embryo E18.CNhs10583.1287-20I660.23
lung, neonate N00.CNhs11224.640-42C684.30
lung, neonate N06.CNhs11212.683-20E579.13
lung, neonate N07.CNhs11111.715-19A369.32
lung, neonate N10.CNhs11219.750-23E677.18
lung, neonate N20.CNhs11109.822-18A466.20
lung, neonate N25.CNhs11119.1359-25C750.77
lung, neonate N30.CNhs11133.1394-42H272.61
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B64.43
mammary gland, adult pregnant day19.CNhs10476.588-5H29.93
medulla oblongata, adult.CNhs10477.17-12C29.15
medulla oblongata, neonate N30.CNhs11200.1396-42A311.84
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C714.10
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C228.53
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E111.67
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E211.32
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E313.57
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D718.64
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D816.04
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D914.72
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D412.55
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D512.27
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D613.04
olfactory brain, adult.CNhs10489.18-22I998.32
ovary, adult.CNhs10507.91-2I736.76
ovary, embryo E18.CNhs11040.505-44H741.31
ovary, neonate N00.CNhs11217.1299-22I439.09
oviduct, adult pregnant day01.CNhs10500.988-6G639.26
pancreas, adult.CNhs10486.34-16E435.84
pancreas, embryo E14.CNhs11012.405-44F441.52
pancreas, embryo E15.CNhs11042.1556-45F239.30
pancreas, embryo E16.CNhs11003.460-26E573.56
pancreas, embryo E17.CNhs10599.1558-45G386.82
pancreas, embryo E18.CNhs10580.1535-43I761.18
pancreas, neonate N00.CNhs11105.645-26G937.73
pancreas, neonate N01.CNhs11138.1531-43D735.63
pancreas, neonate N02.CNhs11139.1539-43D845.63
pancreas, neonate N16.CNhs11136.787-43B637.92
pancreas, neonate N25.CNhs11094.1555-45E239.00
pancreas, neonate N30.CNhs11182.1548-44H548.47
pituitary gland, adult.CNhs10493.21-1G810.55
pituitary gland, embryo E12.CNhs11018.346-16E615.13
pituitary gland, embryo E13.CNhs11009.370-44C725.48
pituitary gland, embryo E14.CNhs11037.398-44A523.36
pituitary gland, embryo E15.CNhs10592.427-16B919.15
pituitary gland, embryo E16.CNhs11036.449-43F613.02
pituitary gland, embryo E17.CNhs11039.1265-44F518.26
pituitary gland, neonate N00.CNhs11190.1308-22E921.01
placenta, adult pregnant day10.CNhs10472.539-13I710.09
placenta, adult pregnant day17.CNhs10464.577-18G335.80
prostate, adult.CNhs10470.859-1F85.73
skin, adult.CNhs10492.30-1C327.37
skin, neonate N00.CNhs11124.650-25G468.62
skin, neonate N03.CNhs11215.662-22H331.97
skin, neonate N06.CNhs11097.693-20I520.65
skin, neonate N10.CNhs11108.762-6C431.84
small intestine, neonate N16.CNhs11114.790-21I16.12
spinal cord, adult.CNhs10505.24-13C910.01
spleen, adult.CNhs10465.25-2G24.10
spleen, embryo E16.CNhs11035.461-43C122.50
spleen, embryo E18.CNhs11011.1271-21F211.85
spleen, neonate N10.CNhs11116.752-24D15.46
spleen, neonate N20.CNhs11112.824-19H13.42
spleen, neonate N25.CNhs11099.1354-25G33.43
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C666.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C972.35
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D369.10
stomach, adult.CNhs10503.33-1H614.32
stomach, embryo E12.CNhs10588.356-43E318.66
stomach, embryo E15.CNhs10603.1252-16G830.70
stomach, embryo E16.CNhs11022.459-17D420.31
stomach, embryo E17.CNhs11006.1035-18D519.86
stomach, embryo E18.CNhs10999.1286-20C617.47
stomach, neonate N03.CNhs11193.1340-24B813.62
stomach, neonate N07.CNhs11210.718-18A919.42
stomach, neonate N25.CNhs11104.1355-25E49.68
stomach, neonate N30.CNhs11134.1386-42I116.20
submandibular gland, adult.CNhs10469.59-29C15.59
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F534.99
testis, embryo E15.CNhs11034.443-27C534.58
testis, embryo E16.CNhs11033.470-26G551.92
testis, embryo E17.CNhs11029.486-18I538.49
testis, embryo E18.CNhs11027.503-18G551.70
testis, neonate N00.CNhs11189.1300-22B759.97
testis, neonate N07.CNhs11222.726-26I438.02
testis, neonate N10.CNhs11204.763-44D917.62
testis, neonate N20.CNhs11110.839-18H37.97
testis, neonate N30.CNhs11130.1391-42E26.91
thymus, adult.CNhs10471.38-12B55.69
thymus, embryo E14.CNhs11041.402-44I411.96
thymus, embryo E15.CNhs11005.430-45I212.53
thymus, embryo E16.CNhs11002.456-26C512.86
thymus, embryo E17.CNhs10581.478-18C110.38
thymus, embryo E18.CNhs10595.1273-19G412.32
thymus, neonate N02.CNhs11181.1541-43F87.69
thymus, neonate N03.CNhs11137.2104-43C76.35
thymus, neonate N06.CNhs11197.681-26C45.35
thymus, neonate N07.CNhs11211.713-19D38.54
thymus, neonate N10.CNhs11194.748-24E47.16
thymus, neonate N20.CNhs11186.820-7A29.84
thymus, neonate N25.CNhs11125.1362-25G75.97
thymus, neonate N30.CNhs11132.1393-42G29.58
tongue, adult.CNhs10499.32-1B415.19
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H39.99
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F721.89
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G530.22
urinary bladder, adult.CNhs10481.879-12E412.75
uterus, adult pregnant day19.CNhs10497.590-15F515.39
uterus, adult.CNhs10509.92-27E539.19
vagina, adult.CNhs10502.89-27D521.87
vesicular gland, adult.CNhs10491.51-27F85.52
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A139.53
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A248.33
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A347.55
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D757.06
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A476.04
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A555.14
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A676.28
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A773.40
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A897.88
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A987.50
whole body, embryo E11.CNhs11014.324-5I815.05
whole body, embryo E12.CNhs10587.857-27C925.54
whole body, embryo E13.CNhs10512.372-23H222.20
whole body, embryo E14.5.CNhs10578.420-27D218.23
whole body, embryo E14.CNhs10519.395-14B123.90
whole body, embryo E16.CNhs10514.453-14F222.80
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G523.56
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G526.37
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G524.07
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G525.27
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G520.79
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G526.03
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G523.60
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G521.00
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G520.50
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G518.58
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G522.83
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G519.87
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G521.43
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G520.90
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G523.66
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G520.59
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G521.94
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G523.55
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G521.65
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G522.85
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G520.49
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G517.89
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G518.47
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G521.88
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G523.37
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G519.60
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G518.01
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G521.54
whole body, embryo E17.5.CNhs10513.490-9F928.16
whole body, embryo E17.CNhs10517.475-3I529.73
whole body, embryo E18.CNhs10516.493-3B327.37
whole body, neonate N00.CNhs10525.657-19C236.10
whole body, neonate N01.CNhs10576.659-23C638.26
whole body, neonate N06.CNhs10515.692-21D121.62
whole body, neonate N10.CNhs10518.761-6B422.49





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
thoracic cavity element2.17e-0917
thoracic segment organ2.17e-0917
thoracic cavity2.17e-0917
thoracic segment of trunk2.17e-0917
respiratory primordium2.17e-0917
endoderm of foregut2.17e-0917
lung9.03e-0814
respiratory tube9.03e-0814
respiration organ9.03e-0814
pair of lungs9.03e-0814
lung primordium9.03e-0814
lung bud9.03e-0814
occipital lobe8.90e-0710
visual cortex8.90e-0710
neocortex8.90e-0710
Retrieved from "http://f5-webapp4.gsc.riken.jp/resource_browser/index.php?title=FFCP_PHASE1:Mm9::chr15:101054648..101054662,%2B&oldid=4254048"